CF836131

Overview
NameCF836131
Unique NameCF836131
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length726
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: IAA3_ARATH (Auxin-responsive protein IAA3 OS=Arabidopsis thaliana GN=IAA3 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.611e-36
Identity = 78/150 (52.00%), Postives = 100/150 (66.67%), Query Frame = 2
Query:  203 SNDNKHCEENDAMASTTTPATKAQVVGWPPVRAYRKNAMK---------GSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGL 625
            S D +   E+ +  + T+P  KAQ+VGWPPVR+YRKN ++         G   +VKV+++GAPYLRK+DL  Y  Y ELL ALE MF F      V E    D   G ++VPTYEDKDGDWML+GDVPW+MF+ +CKR+R+MK SEA GL
Sbjct:   41 STDTEKEIESSSRKTETSPPRKAQIVGWPPVRSYRKNNIQSKKNESEHEGQGIYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKF-----SVGEYFERDGYKGSDFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGL 185          
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: IAA1_ARATH (Auxin-responsive protein IAA1 OS=Arabidopsis thaliana GN=IAA1 PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.748e-36
Identity = 74/148 (50.00%), Postives = 101/148 (68.24%), Query Frame = 2
Query:  173 ETVDLNLMSSSNDNKHCEENDAMASTTTPATKAQVVGWPPVRAYRKNAMKGSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEA 616
            + ++L+ + S+N  K+   ND+   +  P  K Q+VGWPPVR+ RKN    +  +VKV+++GAPYLRK+DL++Y +Y ELL ALE+MF F      V E    +   G  +VPTYEDKDGDWMLVGDVPW MF  SC+++R+MK SEA
Sbjct:   25 QQLELSCVRSNNKRKN---NDSTEESAPPPAKTQIVGWPPVRSNRKNNNNKNVSYVKVSMDGAPYLRKIDLKMYKNYPELLKALENMFKFT-----VGEYSEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSEA 164          
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: IAA3_ORYSJ (Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica GN=IAA3 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.122e-36
Identity = 77/162 (47.53%), Postives = 106/162 (65.43%), Query Frame = 2
Query:  224 EENDAMASTTTPATKAQVVGWPPVRAYRKNAMKGS----------------CKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGLAPRTPAKNSSKS 661
            EE+  +A+   PA KAQVVGWPP+R+YRKN M  +                  +VKV+++GAPYLRKVDL+ Y +Y+++   LE MF   +       ++  +N    EYV TYEDKDGDWMLVGDVPW+MF +SC+R+R+MK S+AIGLAPR   K+ +++
Sbjct:  107 EEDKKVAAPPQPAAKAQVVGWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDMSLGLEKMFIGFS-----TGKEGAENQKDGEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLAPRAGEKSKNRN 263          
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: IAA4_ARATH (Auxin-responsive protein IAA4 OS=Arabidopsis thaliana GN=IAA4 PE=2 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 2.326e-35
Identity = 75/140 (53.57%), Postives = 96/140 (68.57%), Query Frame = 2
Query:  227 ENDAMASTTTPATKAQVVGWPPVRAYRKNAMK-------GSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGL 625
            E+     T +P  KAQ+VGWPPVR+YRKN ++       G   +VKV+++GAPYLRK+DL +Y  Y EL+ +LE+MF F      V E    +   G ++VPTYEDKDGDWMLVGDVPW+MFV SCKR+R+MK SE  GL
Sbjct:   48 ESTGKTETASPP-KAQIVGWPPVRSYRKNNVQTKKSESEGQGNYVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFKF-----SVGEYFEREGYKGSDFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGL 181          
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: IAA19_ORYSJ (Auxin-responsive protein IAA19 OS=Oryza sativa subsp. japonica GN=IAA19 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.326e-35
Identity = 83/201 (41.29%), Postives = 119/201 (59.20%), Query Frame = 2
Query:  146 KAGTKRGFLETVDLN-----LMSSSNDNKHCEENDA-------MASTTTPATKAQVVGWPPVRAYRKNAMKGS---------------CKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFS-FLT---------IRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGLAPRT 637
            + G KRGF++++D +       ++ +D +   E +         A+    A KAQVVGWPPVR+YRKN +  S               C +VKV+++GAPYLRKVDL+ Y SY++L  ALE MFS F+T          R+ + +    D +   EYV TYEDKD DWMLVGD+PW +F  SC+++R+M+ S+A G+APR+
Sbjct:   73 RGGAKRGFVDSLDRSEGRRAAATAGDDERGVREEEEEEKGLGEAAAGAPRAAKAQVVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGMAPRS 273          
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: IAA2_ARATH (Auxin-responsive protein IAA2 OS=Arabidopsis thaliana GN=IAA2 PE=2 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 3.038e-35
Identity = 86/190 (45.26%), Postives = 109/190 (57.37%), Query Frame = 2
Query:   56 MTPEKVNHLPESDTKXXXXXXXXXXECHRTKAGTKRGFLETVDLNLMSSSNDNKHCEENDAMASTTTPATKAQVVGWPPVRAYRKNAMKGSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGL 625
            M  EKVN L   DT+                 G      E  +++ + S+N     E  D   ST  P TK Q+VGWPPVR+ RKN    S  +VKV+++GAPYLRK+DL+ Y +Y ELL ALE+MF  +     + E    +   G  +VPTYEDKDGDWMLVGDVPW MF  SCKR+R+MK S+A  L
Sbjct:    1 MAYEKVNELNLKDTELCLGLP-----------GRTEKIKEEQEVSCVKSNNKRLFEETRDEEEST--PPTKTQIVGWPPVRSSRKN--NNSVSYVKVSMDGAPYLRKIDLKTYKNYPELLKALENMFKVM-----IGEYCEREGYKGSGFVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPAL 170          
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: AX22E_PHAAU (Auxin-induced protein 22E OS=Phaseolus aureus GN=AUX22E PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.968e-35
Identity = 77/154 (50.00%), Postives = 106/154 (68.83%), Query Frame = 2
Query:  188 NLMSSSNDNKHCEENDAMASTTTPATKAQVVGWPPVRAYRKNAMK--------GSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGL 625
            N+ S S+D+    +++    +  PA K QVVGWPP+R++RKN+++        G+  ++KV++ GAPYLRK+DL++Y SY ELL AL+++F         +ER   +  NG EY PTYEDKDGDWMLVGDVPW MFV SCKR+R++K SEA GL
Sbjct:   55 NINSDSSDSTTTSDHNE--DSVQPA-KVQVVGWPPIRSFRKNSLQQKKVEQGDGTGMYLKVSMAGAPYLRKIDLKVYKSYPELLKALQNLFKCTF--GEYSER---EGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIIKGSEAKGL 200          
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSJ (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. japonica GN=IAA5 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.572e-34
Identity = 84/192 (43.75%), Postives = 117/192 (60.94%), Query Frame = 2
Query:  143 TKAGTKRGFLETVDLNLMSSSN--DNKHCEENDAMASTTTPATKAQVVGWPPVRAYRKNAMKGSCK---------------FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFS-FLT----IRNHVNERKII-----DNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGLAPRT 637
            TKA +KR F ++   +  SS +      C++  A A+   PA KAQVVGWPPVR YRKN +  S                 +VKV+++GAPYLRKVDL++Y SY++L  ALE MFS F+T    +R   N  ++      D +   EYV TYEDKD DWMLVGD+PW +F   C+++++M+ S+A G+APR+
Sbjct:   73 TKAASKRAFPDSSPRHGASSGSVAAAAACQDKAAPAAAP-PAAKAQVVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIAPRS 263          
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: IAA5_ORYSI (Auxin-responsive protein IAA5 OS=Oryza sativa subsp. indica GN=IAA5 PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.359e-34
Identity = 84/193 (43.52%), Postives = 117/193 (60.62%), Query Frame = 2
Query:  143 TKAGTKRGFLETVDLNLMSSSN---DNKHCEENDAMASTTTPATKAQVVGWPPVRAYRKNAMKGSCK---------------FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFS-FLT----IRNHVNERKII-----DNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGLAPRT 637
            TKA +KR F ++   +  SS +       C++  A A+   PA KAQVVGWPPVR YRKN +  S                 +VKV+++GAPYLRKVDL++Y SY++L  ALE MFS F+T    +R   N  ++      D +   EYV TYEDKD DWMLVGD+PW +F   C+++++M+ S+A G+APR+
Sbjct:   73 TKAASKRAFPDSSPRHGASSGSVAAAAAACQDKAAPAAAP-PAAKAQVVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIAPRS 264          
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: IAA15_ARATH (Auxin-responsive protein IAA15 OS=Arabidopsis thaliana GN=IAA15 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.335e-33
Identity = 83/160 (51.88%), Postives = 102/160 (63.75%), Query Frame = 2
Query:  146 KAGTKRGFLETVDLNLMSSSNDNKHCEENDAMASTTTPATKAQVVGWPPVRAYRKNAMKGSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGL 625
            K G KR FLETVDL L  +        EN+ ++S  T     Q+VGWPPV   RK   +   K+VKVA++GA YLRKVDL +Y  Y +L +ALE+MF  +     V E +        E+V TYEDKDGD MLVGDVPW MFVESCKR+RLMK+ +AIGL
Sbjct:   38 KFGNKRRFLETVDLKLGEA-------HENNYISSMVT---NDQLVGWPPVATARKTVRR---KYVKVALDGAAYLRKVDLGMYDCYGQLFTALENMFQGIITICRVTELE-----RKGEFVATYEDKDGDLMLVGDVPWMMFVESCKRMRLMKTGDAIGL 179          
The following BLAST results are available for this feature:
BLAST of CF836131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
IAA3_ARATH1.611e-3652.00Auxin-responsive protein IAA3 OS=Arabidopsis thali... [more]
IAA1_ARATH2.748e-3650.00Auxin-responsive protein IAA1 OS=Arabidopsis thali... [more]
IAA3_ORYSJ6.122e-3647.53Auxin-responsive protein IAA3 OS=Oryza sativa subs... [more]
IAA4_ARATH2.326e-3553.57Auxin-responsive protein IAA4 OS=Arabidopsis thali... [more]
IAA19_ORYSJ2.326e-3541.29Auxin-responsive protein IAA19 OS=Oryza sativa sub... [more]
IAA2_ARATH3.038e-3545.26Auxin-responsive protein IAA2 OS=Arabidopsis thali... [more]
AX22E_PHAAU3.968e-3550.00Auxin-induced protein 22E OS=Phaseolus aureus GN=A... [more]
IAA5_ORYSJ2.572e-3443.75Auxin-responsive protein IAA5 OS=Oryza sativa subs... [more]
IAA5_ORYSI3.359e-3443.52Auxin-responsive protein IAA5 OS=Oryza sativa subs... [more]
IAA15_ARATH6.335e-3351.88Auxin-responsive protein IAA15 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02H13_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02H13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836131 ID=CF836131; Name=CF836131; organism=Citrus sinensis; type=EST; length=726bp
TTTTGTTAACCCATATAACCACATAGCAAAGCAAAATTTGGCAACCTTAG
ACCTAATGACACCGGAAAAAGTTAATCATTTGCCGGAATCCGACACGAAG
CTCACGTTAGGCTTACCCGGCGGCGGCGGCGAGTGTCACCGGACGAAAGC
CGGCACGAAGCGTGGCTTCTTAGAGACCGTTGATCTAAACCTCATGAGCT
CAAGCAACGATAACAAACATTGCGAAGAGAACGATGCAATGGCCTCGACT
ACAACCCCAGCAACCAAGGCACAAGTGGTGGGGTGGCCGCCGGTGAGAGC
ATATCGGAAAAATGCTATGAAGGGCAGCTGCAAATTTGTAAAGGTGGCAG
TTGAAGGAGCTCCATATCTAAGAAAAGTTGACCTTGAGATATACCATAGT
TATCAAGAACTCTTGAGTGCTTTAGAGGATATGTTCTCATTCTTGACTAT
AAGGAACCACGTAAATGAGAGAAAGATTATAGATAATGTAAATGGAGTTG
AATATGTACCTACTTATGAAGACAAAGATGGAGATTGGATGTTAGTTGGA
GATGTGCCATGGAAAATGTTTGTTGAATCTTGCAAGCGAGTAAGGTTGAT
GAAAAGCTCAGAAGCAATTGGGTTAGCTCCAAGAACACCTGCAAAAAATT
CAAGCAAGAGTTGAAGAATGAATAACAGAATAAGGGGCTTATTGTATAAG
GAGGCATTCCTGGAGTGACAATTAAT
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