CF836131
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: IAA26_ARATH (Auxin-responsive protein IAA26 OS=Arabidopsis thaliana GN=IAA26 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 5.207e-19 Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = 2 Query: 275 VVGWPPVRAYRKNAMKGSCK-----------------------------FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMF-SFLTIRNHVN-----ERKIIDNVNGV-EYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSE 613 VVGWPPVR++RKN S FVK+ ++G P RKVDL Y+SY++L ++ +F L + ++ E+ II ++G E+ TYED +GD MLVGDVPW+MFV S KR+R++KSSE Sbjct: 104 VVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLSFVVDKLFRGLLAAQRDISDGQGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKSSE 252
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: IAA6_ORYSJ (Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica GN=IAA6 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.408e-18 Identity = 74/229 (32.31%), Postives = 102/229 (44.54%), Query Frame = 2 Query: 143 TKAGTKRGFLETVDLNLMSSSNDNKH-----------CEENDAMASTT-------------TPATKAQ-------------VVGWPPVRAYRKNAMKGS--------------------CK---FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMF-SFLTIRNHVNERKIIDN----------VNGV-EYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSE 613 T G KRGF++TV+ + ND K EE A S PAT A+ VVGWPP+R++R+N S CK VK+ ++G P RK+DL Y+SY L SA++ +F FL + +I ++G EY YED +GD MLVGDVPWK+FV + KR+R+++SSE Sbjct: 96 TTTGAKRGFIDTVE-DKTEGYNDQKQQARAGCGKELAVEEMIAAVSERKKGCCPPPPPPHGAPATPARNRPQTQGRGAAAPVVGWPPIRSFRRNLASSSSSKHSPEPQNDNANAKVTLTCKKNPLVKINMDGIPIGRKIDLAAYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKIFYQLLDGSGEYTLVYEDSEGDRMLVGDVPWKVFVSTAKRLRVLRSSE 323
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: IAA2_ORYSJ (Auxin-responsive protein IAA2 OS=Oryza sativa subsp. japonica GN=IAA2 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.408e-18 Identity = 63/186 (33.87%), Postives = 89/186 (47.85%), Query Frame = 2 Query: 197 SSSNDNKHCEENDA-----MASTTTPATK-------AQVVGWPPVRAYRKNAMKGSCK-----------------------------FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRN------HVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSE 613 SSS+ +K E + A + S T A+K A VVGWPPVR++R+N S FVK+ ++G P RKVDL Y Y +L +A++ +F L + + V G EY YED +GD MLVGDVPW+MF+ + KR+R++KSS+ Sbjct: 33 SSSSSSKPSEGSTAAPAFALRSNGTNASKPSGAAAAAPVVGWPPVRSFRRNLASSSSSSSKQAPPPPSSSPQNGDKASKDGGAEKGMFVKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADGEADAAAAGEMVGGGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSD 218
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: IAA7_ORYSJ (Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica GN=IAA7 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.757e-18 Identity = 59/190 (31.05%), Postives = 91/190 (47.89%), Query Frame = 2 Query: 146 KAGTKRGFLETVDLNLMSSSNDNKHCEENDAMASTTTPATKAQVVGWPPVRAYRKNAMKGS--------------------CKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTI--------------RNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSE 613 KA +G E + + ++ +N N+ T +P+T VVGWPPVR +R+N S F+K+ ++G P RK+DL + SY++L A++ +F L + V ++D EY YED +GD +LVGDVPW MFV S KR+R++K+S+ Sbjct: 98 KANKNKGSPEEEEAHPPPATGNNALASNNNGCFQTRSPSTP--VVGWPPVRTFRRNLATSSKASLELQNGKKAAKAEEIKRAPFIKINMDGVPIGRKIDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLDGTG--EYTLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSD 283
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: IAA18_ARATH (Auxin-responsive protein IAA18 OS=Arabidopsis thaliana GN=IAA18 PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.757e-18 Identity = 62/170 (36.47%), Postives = 84/170 (49.41%), Query Frame = 2 Query: 242 ASTTTPATK----AQVVGWPPVRAYRKNAMKGSCK----------------------------------FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNH-----VNERKIIDNV---NGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSE 613 +ST T + K VVGWPPVR++RKN GS FVK+ + G P RKVDL ++SY++L ++ +F L + + K I + NG EY TYED +GD MLVGDVPW+MFV S KR+R++K+SE Sbjct: 82 SSTKTTSHKRTAPGPVVGWPPVRSFRKNLASGSSSKLGNDSTTSNGVTLKNQKCDAAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSFTVDKLFRGLLAAQRDFPSSIEDEKPITGLLDGNG-EYTLTYEDNEGDKMLVGDVPWQMFVSSVKRLRVIKTSE 250
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: IAA25_ORYSJ (Auxin-responsive protein IAA25 OS=Oryza sativa subsp. japonica GN=IAA25 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17 Identity = 63/182 (34.62%), Postives = 86/182 (47.25%), Query Frame = 2 Query: 209 DNKHCEEND-AMASTTTPATKAQVVGWPPVRAYRKNAM--------------------------------KGSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMF-SFLT--IRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGLAPRTPAK 646 + H N+ A+ A+ AQ+VGWPPVRA+RKN S FVKV +EG RK+DL+ + SY L AL+ MF FL+ I NE + ++ + YV YED +GD MLVGDVPW++F+ S KR+ + + PR AK Sbjct: 70 EQAHQRPNECAVQRENRAASSAQLVGWPPVRAFRKNLSTPKPADADDLMNKVKLCSDEGHGSRCAAQERRSSSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKKRYVLVYEDNEGDRMLVGDVPWELFIASVKRLYIAQD-------PRVHAK 244
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: IAA20_ORYSJ (Auxin-responsive protein IAA20 OS=Oryza sativa subsp. japonica GN=IAA20 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17 Identity = 55/150 (36.67%), Postives = 75/150 (50.00%), Query Frame = 2 Query: 158 KRGFLETVDLNLMSSSNDNKHCEENDAMASTTTPATKAQVVGWPPVRAYRKNAMKGSCK--FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLM 601 KRGF E + ND+ + D + + ++VGWPPV+ + G C +VKV +EG RK+DL I SY ELL L MF N+ D Y TYED +GDWM VGDVPW+ F +S KR++++ Sbjct: 40 KRGFEEALGGFKTDDDNDDGNGRGGDGDSDGEMGNKRRKLVGWPPVKCLHRRR-DGGCGGGYVKVKMEGLAIGRKLDLSILGSYAELLDTLHLMFP------STNQEDGHDRRRRHPYAVTYEDGEGDWMQVGDVPWEAFAKSVKRLKIL 182
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: IAA10_ARATH (Auxin-responsive protein IAA10 OS=Arabidopsis thaliana GN=IAA10 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.857e-17 Identity = 65/207 (31.40%), Postives = 90/207 (43.48%), Query Frame = 2 Query: 161 RGFLETVDLNLMSSSNDNKHCEENDAMASTTTPATKAQVVGWPPVRAYRKNAMKGSCK---------------------------------------FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMF-------------SFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGL 625 R L + +L S + + + A AS AT+ VGWPP+R YR N++ K VKV ++G RKVDL SY L L+ MF + TI+ K++D + EY+ TY+DKDGDWMLVGDVPW+MF+ S R+R+MK+S G+ Sbjct: 59 RSSLSSSSSSLTRESGTKRSADSSPAAASN---ATRQVAVGWPPLRTYRINSLVNQAKSLATEGGLSSGIQKETTKSVVVAAKNDDACFIKSSRTSMLVKVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGYKTIKETCTS-KLLDGSS--EYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTSIGAGV 259
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: IAA31_ARATH (Auxin-responsive protein IAA31 OS=Arabidopsis thaliana GN=IAA31 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.731e-17 Identity = 50/132 (37.88%), Postives = 75/132 (56.82%), Query Frame = 2 Query: 245 STTTPATKAQVVG---WPPVRAYRKNAMKG---------SCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMK 604 S T P+T Q WPP+++ ++ +KG + FVKV +EG P RK+DL ++ Y+ LL L MF I + +RK +V TYEDKDGDWM+VGD+PW MF+E+ +R+++ + Sbjct: 32 SLTFPSTSPQREARQDWPPIKSRLRDTLKGRRLLRRGDDTSLFVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGN-RDRK--------HHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITR 154
BLAST of CF836131 vs. ExPASy Swiss-Prot
Match: IAA16_ORYSJ (Auxin-responsive protein IAA16 OS=Oryza sativa subsp. japonica GN=IAA16 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.200e-15 Identity = 53/157 (33.76%), Postives = 77/157 (49.04%), Query Frame = 2 Query: 269 AQVVGWPPVRAYRKNAMKGS---------------------CKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNH-----------------VNERK----IIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSE 613 A VVGWPPVR++R+N S +FVKV ++G P RKVDL + Y EL +A++ +F L E + ++D +G EY YED +GD MLVGDVPW MF+ + +R+R+++SS+ Sbjct: 56 APVVGWPPVRSFRRNLASSSSSSKPPRGGRDAAAAATGGKVARFVKVNMDGVPIGRKVDLAAHGGYGELSAAVDRLFRGLLAAQRDPTMATAAAAAAAGESCTGEEEAIAGLLDGGSG-EYTLVYEDDEGDQMLVGDVPWNMFIAAARRLRVLRSSD 211 The following BLAST results are available for this feature:
BLAST of CF836131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836131 ID=CF836131; Name=CF836131; organism=Citrus sinensis; type=EST; length=726bpback to top |