CF836189

Overview
NameCF836189
Unique NameCF836189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.996e-45
Identity = 99/224 (44.20%), Postives = 144/224 (64.29%), Query Frame = 1
Query:   37 SSQTVASSGSTNSGATENSHVIESGNLV------ISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPD-GEKSVVTRLAGTFGYLAPEY 687
            +S T A+  + +  +   SH+    NL        S+  ++  T NF + N +G GGFG VYKG ++ GTK+A+K+  +   + + L+EF++EI +LS++RH+HLVSL+GY  EG E  L+Y+YM  G L  HL+  ++ QL   +W RRL IA+  ARG+ YLH  A+ T IHRD+K++NILLD+++ AKVSDFGL K  P+     V T + G+FGYL PEY
Sbjct:  478 NSHTSATKSTISGKSNNGSHL---SNLAAGLCRRFSLSEIKHGTHNFDESNVIGVGGFGKVYKGVIDGGTKVAIKK--SNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLREHLYNTKRPQL---TWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEY 693          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 5.111e-45
Identity = 96/198 (48.48%), Postives = 134/198 (67.68%), Query Frame = 1
Query:  106 SGNLVISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKSV---VTRLAGTFGYLAPEYA 690
            S +LV+  + L+  T NF+ ENELGRGGFG+VYKG    G +IAVKR+    T+ +   EF++EI +L+K++HR+LV LLG+ IEG ER+LVYE++ + +L   +F  +K QL  L W  R  +   VARG+ YLH  +R   IHRDLK+SNILLD +   K++DFGL KL    + S     +++AGT+GY+APEYA
Sbjct:  344 SDSLVVDFETLKAATDNFSPENELGRGGFGSVYKGVFSGGQEIAVKRLSC--TSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIFDLKKRQL--LDWGVRYKMIGGVARGLLYLHEDSRYRIIHRDLKASNILLDQEMNPKIADFGLAKLYDTDQTSTHRFTSKIAGTYGYMAPEYA 537          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.717e-45
Identity = 99/217 (45.62%), Postives = 139/217 (64.06%), Query Frame = 1
Query:   40 SQTVASSGSTNSGATENSHVIESGNLVISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKS-VVTRLAGTFGYLAPEY 687
            + + A++ +T      N+    +     ++  +R  T+NF     +G GGFG VY+GELEDGT IA+KR  A   + + L EF++EI +LS++RHRHLVSL+G+  E NE +LVYEYM +G L  HLF      L PLSW +RL   +  ARG+ YLH  + +  IHRD+K++NILLD++F AK+SDFGL K  P  + + V T + G+FGYL PEY
Sbjct:  481 NNSTANAKATGGSLRLNTLAASTMGRKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGTLIAIKR--ATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFG---SNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEY 692          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 2.536e-44
Identity = 96/185 (51.89%), Postives = 121/185 (65.41%), Query Frame = 1
Query:  136 LRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKSVVTRLAGTFGYLAPEYA 690
            L+  TQ+F   N+LG GGFG VYKG+L DG ++AVK +  G    K   +F +EI  +S V+HR+LV L G   EG  RLLVYEY+P+G+L + LF  + L L    W+ R  I L VARG+ YLH  AR   +HRD+K+SNILLD     KVSDFGL KL  D +  + TR+AGT GYLAPEYA
Sbjct:  686 LKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQGKG--QFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKTLHL---DWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDDKKTHISTRVAGTIGYLAPEYA 865          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: Y4391_ARATH (Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.536e-44
Identity = 99/214 (46.26%), Postives = 134/214 (62.62%), Query Frame = 1
Query:   55 SSGSTNSGATENSHVIESG---NLVISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKSVVTRLAGTFGYLAPEY 687
            S+  T+ G ++ S+   S        S+  L++ T+NF     +G GGFG VY G L+DGTK+AVKR      + + + EFQ+EI +LSK+RHRHLVSL+GY  E +E +LVYE+M +G    HL+      L PL+W +RL I +  ARG+ YLH    Q  IHRD+KS+NILLD+   AKV+DFGL K    G+  V T + G+FGYL PEY
Sbjct:  489 STFMTSKGGSQKSNFYNSTLGLGRYFSLSELQEATKNFEASQIIGVGGFGNVYIGTLDDGTKVAVKR--GNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENSEMILVYEFMSNGPFRDHLYG---KNLAPLTWKQRLEICIGSARGLHYLHTGTAQGIIHRDVKSTNILLDEALVAKVADFGLSKDVAFGQNHVSTAVKGSFGYLDPEY 697          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.536e-44
Identity = 101/228 (44.30%), Postives = 133/228 (58.33%), Query Frame = 1
Query:    7 CSFNDTARSLSSQTVASSGSTNSGATENSHVIESGNLVISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKSVVTRL-AGTFGYLAPEY 687
            CS NDT  S  S     +G       E      +   V + + L K    F +E+ +G+G F  VYKG L DGT +AVKR        K  +EF++E+ +LS++ H HL+SLLGY  E  ERLLVYE+M HG+L  HL    K   + L W +R++IA+  ARG+EYLH  A    IHRD+KSSNIL+D++  A+V+DFGL  L P    S +  L AGT GYL PEY
Sbjct:  464 CSENDTRSSKDSAFTKDNGKIRPDLDELQKRRRAR--VFTYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDSGSPLAELPAGTLGYLDPEY 689          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.313e-44
Identity = 95/187 (50.80%), Postives = 127/187 (67.91%), Query Frame = 1
Query:  136 LRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKP---LSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKSVVTRLAGTFGYLAPEY 687
            L+  TQNF +    G GGFG VY GE++ GT++A+KR     ++ + ++EFQ+EI +LSK+RHRHLVSL+G+  E  E +LVYEYM +G L  HL+  ++    P   LSW +RL I +  ARG+ YLH  A Q  IHRD+K++NILLD++  AKVSDFGL K AP  E  V T + G+FGYL PEY
Sbjct:  518 LQTATQNFDENAVCGVGGFGKVYIGEIDGGTQVAIKR--GSQSSEQGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKENDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAPMDEGHVSTAVKGSFGYLDPEY 702          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.313e-44
Identity = 96/207 (46.38%), Postives = 133/207 (64.25%), Query Frame = 1
Query:   82 TENSHV---IESGNLVISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKL--APDGEKSVVTRLAGTFGYLAPEY 687
            +EN H    I + ++     VL+  T +F+ EN+LG GGFG VYKG L DG KIAVKR+       +   EF++E  +++K++HR+LV LLGYSIEG ERLLVYE++PH +L + +F  + +Q   L W  R  I   VARG+ YLH  +R   IHRDLK+SNILLD++   K++DFG+ +L       +    R+ GTFGY+APEY
Sbjct:  316 SENKHENENISTDSMKFDFSVLQDATSHFSLENKLGEGGFGAVYKGVLSDGQKIAVKRLSKNAQQGET--EFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIF--DPIQGNELEWEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKIADFGMARLFDIDHTTQRYTNRIVGTFGYMAPEY 518          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 3.313e-44
Identity = 91/198 (45.96%), Postives = 136/198 (68.69%), Query Frame = 1
Query:  100 IESGNLVISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGTKIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKL-APDGEKSVVTRLAGTFGYLAPEYA 690
            I + +L +  +++R  T  F++ N++G+GGFG VYKG   +GT++AVKR+    ++ +   EF++E+ V++K++HR+LV LLG+SI G ER+LVYEYMP+ +L   LF  +  +   L WTRR  +   +ARG+ YLH  +R T IHRDLK+SNILLD D   K++DFGL ++   D  +   +R+ GTFGY+APEYA
Sbjct:  318 ITTESLQLDYRMIRAATNKFSENNKIGQGGFGEVYKGTFSNGTEVAVKRLSK--SSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSLDYFLF--DPAKQNQLDWTRRYKVIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKLADFGLARIFGMDQTQENTSRIVGTFGYMAPEYA 511          
BLAST of CF836189 vs. ExPASy Swiss-Prot
Match: FERON_ARATH (Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana GN=FER PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.638e-44
Identity = 99/214 (46.26%), Postives = 136/214 (63.55%), Query Frame = 1
Query:   52 ASSGSTNSGATENSHVIESGNLVISVQVLRKVTQNFAQENELGRGGFGTVYKGELEDGT-KIAVKRMEAGVTTTKALDEFQSEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPHGALSRHLFQWEKLQLKPLSWTRRLSIALDVARGMEYLHCLARQTFIHRDLKSSNILLDDDFRAKVSDFGLVKLAPDGEKS-VVTRLAGTFGYLAPEY 687
            A S  TN+  +  S +  +     S   ++  T+NF +   LG GGFG VY+GE++ GT K+A+KR      + + + EFQ+EI +LSK+RHRHLVSL+GY  E  E +LVY+YM HG +  HL+   K Q   L W +RL I +  ARG+ YLH  A+ T IHRD+K++NILLD+ + AKVSDFGL K  P  + + V T + G+FGYL PEY
Sbjct:  501 AGSAKTNTTGSYASSLPSNLCRHFSFAEIKAATKNFDESRVLGVGGFGKVYRGEIDGGTTKVAIKR--GNPMSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTMREHLY---KTQNPSLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEY 709          
The following BLAST results are available for this feature:
BLAST of CF836189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ANX2_ARATH2.996e-4544.20Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]
CRK28_ARATH5.111e-4548.48Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
Y1357_ARATH8.717e-4545.62Probable receptor-like protein kinase At1g30570 OS... [more]
Y5614_ARATH2.536e-4451.89Probable LRR receptor-like serine/threonine-protei... [more]
Y4391_ARATH2.536e-4446.26Probable receptor-like protein kinase At4g39110 OS... [more]
ACR4_ARATH2.536e-4444.30Serine/threonine-protein kinase-like protein ACR4 ... [more]
Y5613_ARATH3.313e-4450.80Probable receptor-like protein kinase At5g61350 OS... [more]
CRK26_ARATH3.313e-4446.38Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK15_ARATH3.313e-4445.96Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
FERON_ARATH9.638e-4446.26Receptor-like protein kinase FERONIA OS=Arabidopsi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS03_02J02_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02J02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836189 ID=CF836189; Name=CF836189; organism=Citrus sinensis; type=EST; length=691bp
TAAGATTGCTCCTTTAATGACACCGCAAGAAGTTTATCCAGTCAAACTGT
GGCTAGTTCTGGGAGTACTAATAGTGGGGCAACAGAGAACTCTCATGTGA
TTGAGTCGGGGAATCTGGTCATATCTGTTCAAGTTCTTCGTAAAGTTACT
CAAAATTTTGCACAGGAAAATGAGCTTGGCCGAGGTGGCTTTGGAACTGT
TTATAAGGGTGAACTGGAAGATGGAACAAAAATTGCAGTCAAGAGAATGG
AGGCTGGCGTGACAACCACCAAAGCACTGGATGAATTTCAATCTGAAATA
GCTGTTCTTTCTAAGGTCCGGCACAGACATCTGGTCTCTCTTTTGGGTTA
TTCTATTGAAGGCAATGAGAGGCTTCTGGTATATGAGTACATGCCTCATG
GTGCTCTAAGCAGACATCTTTTCCAATGGGAGAAGCTGCAGTTGAAGCCT
CTATCTTGGACGAGGAGGCTCAGCATTGCATTGGACGTTGCTAGAGGAAT
GGAGTATCTTCATTGTCTTGCTCGCCAGACCTTTATACATCGAGATCTCA
AATCTTCCAACATTCTTTTGGATGATGACTTTCGGGCAAAAGTTTCAGAT
TTTGGATTGGTGAAACTTGCTCCAGATGGCGAGAAGTCTGTCGTTACTAG
GCTTGCTGGGACATTTGGGTACCTTGCACCGGAATATGCTG
back to top