CF836233

Overview
NameCF836233
Unique NameCF836233
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length637
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG_BURMS (Urease accessory protein ureG OS=Burkholderia mallei (strain SAVP1) GN=ureG PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.401e-51
Identity = 104/176 (59.09%), Postives = 128/176 (72.73%), Query Frame = 1
Query:  112 SPGYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGAD 636
            +P   +++ PP+           VGIGGPVG+GKT L+  LCK +R++Y L A+TNDI+TKED   L   GALPE RI  VETGGCPH AIRED SINL  +E +   F  AD++  ESGGDNLAA FS EL+D  IY+IDV+GG+KIPRKGGPGIT++DLLVINKTDLA  +GA+
Sbjct:    8 APARRTKKLPPL----------RVGIGGPVGSGKTTLLEMLCKGMRERYDLVAITNDIYTKEDQRLLTIAGALPEARIMGVETGGCPHTAIREDASINLEAVERMLARFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLVINKTDLAPLVGAN 173          
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG_BURMA (Urease accessory protein ureG OS=Burkholderia mallei GN=ureG PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.401e-51
Identity = 104/176 (59.09%), Postives = 128/176 (72.73%), Query Frame = 1
Query:  112 SPGYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGAD 636
            +P   +++ PP+           VGIGGPVG+GKT L+  LCK +R++Y L A+TNDI+TKED   L   GALPE RI  VETGGCPH AIRED SINL  +E +   F  AD++  ESGGDNLAA FS EL+D  IY+IDV+GG+KIPRKGGPGIT++DLLVINKTDLA  +GA+
Sbjct:    8 APARRTKKLPPL----------RVGIGGPVGSGKTTLLEMLCKGMRERYDLVAITNDIYTKEDQRLLTIAGALPEARIMGVETGGCPHTAIREDASINLEAVERMLARFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLVINKTDLAPLVGAN 173          
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG_BURM9 (Urease accessory protein ureG OS=Burkholderia mallei (strain NCTC 10229) GN=ureG PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.401e-51
Identity = 104/176 (59.09%), Postives = 128/176 (72.73%), Query Frame = 1
Query:  112 SPGYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGAD 636
            +P   +++ PP+           VGIGGPVG+GKT L+  LCK +R++Y L A+TNDI+TKED   L   GALPE RI  VETGGCPH AIRED SINL  +E +   F  AD++  ESGGDNLAA FS EL+D  IY+IDV+GG+KIPRKGGPGIT++DLLVINKTDLA  +GA+
Sbjct:    8 APARRTKKLPPL----------RVGIGGPVGSGKTTLLEMLCKGMRERYDLVAITNDIYTKEDQRLLTIAGALPEARIMGVETGGCPHTAIREDASINLEAVERMLARFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLVINKTDLAPLVGAN 173          
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG_BURM7 (Urease accessory protein ureG OS=Burkholderia mallei (strain NCTC 10247) GN=ureG PE=3 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 2.401e-51
Identity = 104/176 (59.09%), Postives = 128/176 (72.73%), Query Frame = 1
Query:  112 SPGYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGAD 636
            +P   +++ PP+           VGIGGPVG+GKT L+  LCK +R++Y L A+TNDI+TKED   L   GALPE RI  VETGGCPH AIRED SINL  +E +   F  AD++  ESGGDNLAA FS EL+D  IY+IDV+GG+KIPRKGGPGIT++DLLVINKTDLA  +GA+
Sbjct:    8 APARRTKKLPPL----------RVGIGGPVGSGKTTLLEMLCKGMRERYDLVAITNDIYTKEDQRLLTIAGALPEARIMGVETGGCPHTAIREDASINLEAVERMLARFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLVINKTDLAPLVGAN 173          
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG_RALSO (Urease accessory protein ureG OS=Ralstonia solanacearum GN=ureG PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.136e-51
Identity = 99/155 (63.87%), Postives = 121/155 (78.06%), Query Frame = 1
Query:  172 AFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGA 633
            A  VG+GGPVG+GKT L+  LCK +R++Y L A+TNDI+TKED   L  +GALP ERI  VETGGCPH AIRED SINL  ++ +   F  AD++  ESGGDNLAA FS EL+D  IY+IDV+GG+KIPRKGGPGIT++DLL+INKTDLA  +GA
Sbjct:    8 ALRVGVGGPVGSGKTTLLEMLCKAMRERYDLVAITNDIYTKEDQRLLTLSGALPAERIMGVETGGCPHTAIREDASINLEAVDRMLARFPDADVVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLIINKTDLAPYVGA 162          
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG_NITOC (Urease accessory protein ureG OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=ureG PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.136e-51
Identity = 99/158 (62.66%), Postives = 126/158 (79.75%), Query Frame = 1
Query:  163 NERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGA 633
            +++   VGIGGPVG+GKT L L+LC  LR++Y++A VTNDI+T+ED +FL+R+ AL +ERI  VETGGCPH AIRED SINL  + +LS  F   DL+L ESGGDNLAA FS EL+D  +Y+IDV+ G+KIPRKGGPGI ++DLL+INKTDLA  +GA
Sbjct:    2 SKQPLRVGIGGPVGSGKTTLTLSLCNALRNRYNVAVVTNDIYTEEDAQFLVRHQALAQERIIGVETGGCPHTAIREDASINLEAVAQLSQRFSDLDLILVESGGDNLAATFSPELSDLTLYVIDVAAGEKIPRKGGPGICKSDLLIINKTDLAPLVGA 159          
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG_METFK (Urease accessory protein ureG OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=ureG PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.136e-51
Identity = 102/152 (67.11%), Postives = 121/152 (79.61%), Query Frame = 1
Query:  181 VGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFK-ADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGA 633
            VGIGGPVG+GKTAL LALC+ LR+ Y++A VTNDI+T+ED EFL RN AL  ERI  VETGGCPH AIRED S+NL  + +LS  F   D++  ESGGDNLAA FS EL+D  IY+IDV+ G+KIPRKGGPGIT++DLLVINK DLA  +GA
Sbjct:    9 VGIGGPVGSGKTALTLALCQRLRNVYNIAVVTNDIYTREDAEFLTRNEALAPERIIGVETGGCPHTAIREDASMNLEAVAQLSERFNPLDIVFVESGGDNLAATFSPELSDLTIYVIDVAAGEKIPRKGGPGITKSDLLVINKIDLAPMVGA 160          
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG_BURP1 (Urease accessory protein ureG OS=Burkholderia pseudomallei (strain 1710b) GN=ureG PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.136e-51
Identity = 104/176 (59.09%), Postives = 128/176 (72.73%), Query Frame = 1
Query:  112 SPGYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGAD 636
            +P   +++ PP+           VGIGGPVG+GKT L+  LCK +R++Y L A+TNDI+TKED   L   GALPE RI  VETGGCPH AIRED SINL  +E +   F  AD++  ESGGDNLAA FS EL+D  IY+IDV+GG+KIPRKGGPGIT++DLLVINKTDLA  +GA+
Sbjct:    8 APARRTKKLPPL----------RVGIGGPVGSGKTTLLEMLCKGMRERYDLVAITNDIYTKEDQRLLTIAGALPEARIMGVETGGCPHTAIREDASINLEAVERMLVRFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLVINKTDLAPLVGAN 173          
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG_RALPJ (Urease accessory protein ureG OS=Ralstonia pickettii (strain 12J) GN=ureG PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.096e-51
Identity = 99/155 (63.87%), Postives = 121/155 (78.06%), Query Frame = 1
Query:  172 AFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGA 633
            A  VG+GGPVG+GKT L+  LCK +R++Y L A+TNDI+TKED   L  +GALP ERI  VETGGCPH AIRED SINL  ++ +   F  AD++  ESGGDNLAA FS EL+D  IY+IDV+GG+KIPRKGGPGIT++DLL+INKTDLA  +GA
Sbjct:    8 ALRVGVGGPVGSGKTTLLEMLCKAMRERYDLVAITNDIYTKEDQRLLTISGALPAERIMGVETGGCPHTAIREDASINLEAVDRMLAKFPDADVVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLIINKTDLAPYVGA 162          
BLAST of CF836233 vs. ExPASy Swiss-Prot
Match: UREG_BURXL (Urease accessory protein ureG OS=Burkholderia xenovorans (strain LB400) GN=ureG PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.096e-51
Identity = 104/181 (57.46%), Postives = 130/181 (71.82%), Query Frame = 1
Query:   97 HEPIYSPGYFSRRAPPILSRNFNERAFTVGIGGPVGTGKTALMLALCKFLRDKYSLAAVTNDIFTKEDGEFLMRNGALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLF-KADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLASAIGAD 636
            H P +S    +++ PP+           VG+GGPVG+GKT L+  LCK +R++Y L A+TNDI+TKED   L   GALP ERI  VETGGCPH AIRED SINL  ++ +   F  AD++  ESGGDNLAA FS EL+D  IY+IDV+GG+KIPRKGGPGIT++DLLVINKTDLA  +GA+
Sbjct:    5 HHPAHST-VRTKKLPPL----------RVGVGGPVGSGKTTLLEMLCKAMREQYDLVAITNDIYTKEDQRLLTVAGALPAERIMGVETGGCPHTAIREDASINLEAVDRMLTRFPDADIVFIESGGDNLAATFSPELSDLTIYVIDVAGGEKIPRKGGPGITKSDLLVINKTDLAPMVGAN 174          
The following BLAST results are available for this feature:
BLAST of CF836233 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 254
Match NameE-valueIdentityDescription
UREG_BURMS2.401e-5159.09Urease accessory protein ureG OS=Burkholderia mall... [more]
UREG_BURMA2.401e-5159.09Urease accessory protein ureG OS=Burkholderia mall... [more]
UREG_BURM92.401e-5159.09Urease accessory protein ureG OS=Burkholderia mall... [more]
UREG_BURM72.401e-5159.09Urease accessory protein ureG OS=Burkholderia mall... [more]
UREG_RALSO3.136e-5163.87Urease accessory protein ureG OS=Ralstonia solanac... [more]
UREG_NITOC3.136e-5162.66Urease accessory protein ureG OS=Nitrosococcus oce... [more]
UREG_METFK3.136e-5167.11Urease accessory protein ureG OS=Methylobacillus f... [more]
UREG_BURP13.136e-5159.09Urease accessory protein ureG OS=Burkholderia pseu... [more]
UREG_RALPJ4.096e-5163.87Urease accessory protein ureG OS=Ralstonia pickett... [more]
UREG_BURXL4.096e-5157.46Urease accessory protein ureG OS=Burkholderia xeno... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02K03_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02K03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836233 ID=CF836233; Name=CF836233; organism=Citrus sinensis; type=EST; length=637bp
ACCCATGAAAAAAATCATGGTGATTCAACAGCAACATCATGGGTGGGGTC
AGACGGGAGGGTGTATCATAGCCATGATGGACTGGCGCCACACTCGCACG
AACCCATTTACTCTCCAGGCTATTTCAGCAGAAGAGCTCCGCCTATTCTC
AGCAGAAATTTCAATGAGAGAGCTTTTACCGTTGGCATTGGTGGCCCTGT
TGGTACTGGGAAAACAGCTTTAATGCTGGCTTTGTGTAAATTCTTGCGGG
ACAAGTACAGTCTTGCAGCTGTCACAAATGATATTTTCACAAAAGAAGAT
GGTGAATTCCTGATGCGGAATGGTGCTCTGCCTGAGGAGAGAATACGTGC
TGTGGAAACAGGTGGATGTCCTCATGCTGCAATTCGTGAAGACATCAGCA
TCAATCTGGGCCCTCTCGAGGAACTTTCTAACTTGTTCAAAGCAGACCTA
CTCCTTTGCGAATCTGGGGGAGATAATTTAGCTGCCAACTTCAGCAGGGA
ACTTGCAGACTATATCATTTATATAATAGACGTTTCTGGTGGTGATAAAA
TTCCTCGGAAAGGTGGCCCAGGCATCACCCAAGCTGACCTTCTGGTGATA
AACAAAACTGACCTTGCTTCAGCAATAGGAGCTGACT
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