CF836256

Overview
NameCF836256
Unique NameCF836256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 372.089 bits (954), Expect = 2.216e-102
Identity = 184/229 (80.35%), Postives = 192/229 (83.84%), Query Frame = -2
Query:  166 CAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 852
            CAIDHILDAQ KGEIN+DNVLYIVENINVAAIETTLWSIEWGIAELVNH +IQ K+R E+D VLGPGHQ+TEPD HKLPYLQAVIKETLRLRMAIPLLVPHMNLHD KL G+D+PAESKILVNAWWL NNPA WKK            ES VEANGNDFRYLPFGVGRRSCP             GRLVQN ELLPPPGQSKIDT+EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  278 CAIDHILDAQKKGEINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQDIQNKVREEMDRVLGPGHQVTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDPKLNGFDIPAESKILVNAWWLPNNPAHWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNVELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRSF 506          
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 6.448e-102
Identity = 182/228 (79.82%), Postives = 192/228 (84.21%), Query Frame = -2
Query:  169 CAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRS 852
            CAIDHIL+A+ KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQ KLRNELDTVLGPG Q+TEPD HKLPYLQAV+KETLRLRMAIPLLVPHMNLHDAKL GYD+PAESKILVNAWWLANNP  WKK            ES VEANGNDFRY+PFGVGRRSCP             GR+VQNFELLPPPGQSK+DT+EKGGQFSLHIL HS IV KPR+
Sbjct:  277 CAIDHILEAEQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQSKLRNELDTVLGPGVQVTEPDLHKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPNSWKKPEEFRPERFFEEESHVEANGNDFRYVPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKVDTSEKGGQFSLHILNHSIIVMKPRN 504          
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 1.100e-101
Identity = 184/228 (80.70%), Postives = 192/228 (84.21%), Query Frame = -2
Query:  169 CAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRS 852
            CAIDH+LDAQ KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHP+IQKKLR E+D VLGP HQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNL+DAKL GYD+PAESKILVNAWWLANNPA WK             ES VEANGNDFRY+PFGVGRRSCP             GR+VQNFELLPPPGQSKIDT+EKGGQFSL IL HSTIV KPRS
Sbjct:  277 CAIDHVLDAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPDIQKKLRAEIDRVLGPDHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLNDAKLAGYDIPAESKILVNAWWLANNPAHWKDPQVFRPERFLEEESGVEANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFELLPPPGQSKIDTSEKGGQFSLFILNHSTIVLKPRS 504          
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.588e-100
Identity = 184/228 (80.70%), Postives = 191/228 (83.77%), Query Frame = -2
Query:  169 CAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRS 852
            CAIDHI++AQ KGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVN+PEIQKKLR+ELDTVLG G QI EPD  KLPYLQAVIKETLR RMAIPLLVPHMNLHDAKL GYD+PAESKILVNAWWLANNPA W K            ESKVEANGNDF+Y+PFGVGRRSCP             GRLVQNFELLPPPGQSKIDTAEKGGQFSL ILKHSTIV KPRS
Sbjct:  278 CAIDHIIEAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNNPEIQKKLRHELDTVLGAGVQICEPDVQKLPYLQAVIKETLRYRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPAHWNKPDEFRPERFLEEESKVEANGNDFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFELLPPPGQSKIDTAEKGGQFSLQILKHSTIVCKPRS 505          
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.798e-35
Identity = 80/210 (38.10%), Postives = 117/210 (55.71%), Query Frame = -2
Query:  223 IDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQ--SKIDTAEKGG 846
            +D +L  Q K +++ED ++ ++ ++  A ++TT  S+EW +AEL+ +P +Q+K++ ELD V+G    +TE D   LPYLQ V KE +RL    PL++PH    + K+GGYD+P  S + VN W +A +PA WK             E  V+  G+DFR LPFG GRR CP             G L+ +F   PP G    +ID  E  G
Sbjct:  273 VDALLTLQDKYDLSEDTIIGLLWDMITAGMDTTAISVEWAMAELIRNPRVQQKVQEELDRVIGLERVMTEADFSNLPYLQCVTKEAMRLHPPTPLMLPHRANANVKVGGYDIPKGSNVHVNVWAVARDPAVWK--DPLEFRPERFLEEDVDMKGHDFRLLPFGSGRRVCPGAQLGINLAASMLGHLLHHFCWTPPEGMKPEEIDMGENPG 480          
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.160e-34
Identity = 75/210 (35.71%), Postives = 118/210 (56.19%), Query Frame = -2
Query:  223 IDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPG--QSKIDTAEKGG 846
            +D +L  + + +++ED ++ ++ ++  A ++TT  + EW +AE++ +P +Q+K++ E D V+G    +TE D  +LPYLQ V+KE+ RL    PL++PH +  D K+GGYD+P  S + VN W +A +PA WK             E  V+  G+DFR LPFG GRR CP               L+ +F   PP G    +ID +E  G
Sbjct:  272 VDALLTLKDQYDLSEDTIIGLLWDMITAGMDTTAITAEWAMAEMIKNPRVQQKVQEEFDRVVGLDRILTEADFSRLPYLQCVVKESFRLHPPTPLMLPHRSNADVKIGGYDIPKGSNVHVNVWAVARDPAVWKN--PFEFRPERFLEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMMSHLLHHFVWTPPQGTKPEEIDMSENPG 479          
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.583e-34
Identity = 74/197 (37.56%), Postives = 113/197 (57.36%), Query Frame = -2
Query:  256 IDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPG 846
            +D +   + + +++ED V+ ++ ++  A ++TT+ S+EW +AELV +P +QKKL+ ELD V+G    + E D   LPYLQAV+KE+LRL    PL++PH    + K+GGYD+P  + ++VN W +A +P  W              E  ++  G+DFR LPFG GRR CP             G L+ +FE   P G
Sbjct:  275 VDALFTLKQQYDLSEDTVIGLLWDMITAGMDTTVISVEWAMAELVRNPRVQKKLQEELDRVVGRDRVMLETDFQNLPYLQAVVKESLRLHPPTPLMLPHKASTNVKIGGYDIPKGANVMVNVWAVARDPKVWSN--PLEYRPERFLEENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWSLPEG 469          
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.491e-31
Identity = 69/196 (35.20%), Postives = 107/196 (54.59%), Query Frame = -2
Query:  223 INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKGG 810
            I+ D++  I+ ++  A  +TT   +EW + EL+ HPEI KKL++E+  V+   H IT+ D  K+ YL+AV+KET+R    IPLLVP +  +D ++ GYDVP  + +++NAW +  +P  W +             S V+  G DF  +PFG GRR CP               L+Q F+   P    ++D +E+ G
Sbjct:  293 IDRDSIKAIILDVFAAGTDTTAVVLEWAMTELLRHPEIMKKLQSEVRQVVKDKHNITDDDIEKMHYLKAVMKETMRFHTPIPLLVPRVARNDVEVMGYDVPVGTMVMINAWAIGRDPTSWDE--PEKFRPERFLNSSVDFKGLDFELIPFGAGRRGCPGTTFPMATLEFTLANLMQKFDWELPHECRELDMSERPG 486          
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.599e-30
Identity = 66/204 (32.35%), Postives = 112/204 (54.90%), Query Frame = -2
Query:  223 DAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKK-XXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKGG 831
            D   + ++++ N+   + +I VA  +T+  SIEW +AEL+N+P++ +K R E+D V+G    + E D   LPYLQA+++ETLRL    PL+V   +   A + GYD+PA++++ VN W +  +P  W+K             +++++  G  + ++PFG GRR+CP               ++Q F+     G  K+D  EK G
Sbjct:  284 DENAEIKLDKKNIKAFIMDIFVAGTDTSAVSIEWAMAELINNPDVLEKARQEIDAVVGKSRMVEESDIANLPYLQAIVRETLRLHPGGPLVVRESS-KSAVVCGYDIPAKTRLFVNVWAIGRDPNHWEKPFEFRPERFIRDGQNQLDVRGQHYHFIPFGSGRRTCPGASLAWQVVPVNLAIIIQCFQWKLVGGNGKVDMEEKSG 486          
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.502e-29
Identity = 64/174 (36.78%), Postives = 99/174 (56.90%), Query Frame = -2
Query:  340 IDHILDAQTKGE-----INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 846
            +D ++D +  G+     ++ED +  I+  + +A  ETT  S+EW + EL+ HP+   K++ E+  V+GP  +  E D   LPY+QAV+KE LRL   +PLL+P   + D K  GYD+P  +++LVNAW +  +P  W              ESKV+  G ++  +PFG GRR C
Sbjct:  239 LDVLIDFEGSGKDEPDKLSEDEITVIILEMFLAGTETTSSSVEWALTELLRHPQAMAKVKLEILQVIGPNKKFEECDIDSLPYMQAVLKEQLRLHPPLPLLIPRKAIQDTKFMGYDIPKGTQVLVNAWAIGRDPEYWDN--PFEFKPERFLESKVDVKGQNYELIPFGAGRRMC 410          
The following BLAST results are available for this feature:
BLAST of CF836256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 337
Match NameE-valueIdentityDescription
TCMO_MEDSA2.216e-10280.35Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]
TCMO_ARATH6.448e-10279.82Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
TCMO_RUTGR1.100e-10180.70Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_PETCR1.588e-10080.70Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
C98A2_SOYBN6.798e-3538.10Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C98A3_ARATH1.160e-3435.71Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C98A1_SORBI2.583e-3437.56Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71A8_MENPI3.491e-3135.20Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]
C93A1_SOYBN8.599e-3032.35Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C76A1_SOLME2.502e-2936.78Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02K19_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02K19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836256 ID=CF836256; Name=CF836256; organism=Citrus sinensis; type=EST; length=853bp
TTTTTTATTGCAATCTTAAATGAAGATTTGAAGATTTAAGTTCACAAATT
TACACTAGTATTACATAACTAGCCAACTGCCACTTGATTTGATCCGACAT
TGAAGAAACCATTCAACCACTTTGAAACAGTCTTAACATTACAACCAAAT
GGAATTGTGAAACTAGAATGATCTAGGCTTGGCAACAATGGTCGAGTGCT
TCAAAATGTGCAAACTGAACTGCCCACCTTTCTCTGCAGTGTCAATCTTA
GATTGACCTGGAGGAGGCAAGAGCTCAAAGTTCTGTACCAAACGCCCAAT
AGTGATACCAAGAATTGGCAAAGCAAGGATAATTCCAGGGCAGCTTCTTC
TTCCAACACCGAAAGGAAGGTAACGGAAGTCATTTCCATTAGCCTCAACC
TTGGACTCCTCCTCCAAAAACCTCTCAGGCCTGAATTCTTCAGGTTTCTT
CCATTGGGCGGGATTGTTGGCGAGCCACCACGCGTTCACTAGGATTTTGC
TCTCAGCAGGGACGTCGTAGCCTCCAAGCTTGGCGTCGTGAAGGTTCATG
TGCGGGACAAGAAGAGGAATTGCCATCCTAAGGCGAAGAGTTTCCTTGAT
CACGGCCTGAAGGTAGGGTAGTTTGTGGGTGTCAGGCTCAGTGATTTGAT
GACCAGGACCAAGCACGGTGTCAAGTTCATTGCGGAGCTTCTTCTGGATT
TCAGGATGATTCACTAGCTCTGCAATTCCCCACTCGATCGACCAAAGAGT
TGTCTCGATTGCGGCAACATTGATGTTCTCAACGATGTATAGAACGTTGT
CCTCGTTGATTTCTCCCTTTGTCTGAGCGTCCAAAATATGATCGATTGCG
CAT
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