CF836256

Overview
NameCF836256
Unique NameCF836256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.737e-22
Identity = 61/200 (30.50%), Postives = 99/200 (49.50%), Query Frame = -2
Query:  223 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ-ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQS--KIDTAEKGG 813
            ++  D++  ++ +I +A +     ++ W + EL  HP + KKL+ E+  +LGP  + ITE D  K+ YL+ V+ ET RL    PLL+P + + D K+ GY++P  + I +N + +  +P  WK+            +S ++  G  F  LPFG GRR CP               L+  F+   P G +   ID  E  G
Sbjct:  285 KVTYDHLKGVMSDIFLAGVNGGANTMIWTLTELSRHPRVMKKLQEEIRAMLGPNKERITEEDLEKVEYLKLVMVETFRLHPPAPLLLPRLTMSDIKIQGYNIPKNTMIQINTYAIGRDPKYWKQ--PGEFIPERFLDSPIDYKGQHFELLPFGAGRRICPGMATGITMVELGLLNLLYFFDWSLPNGMTIEDIDMEEDEG 482          
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.268e-22
Identity = 64/204 (31.37%), Postives = 95/204 (46.57%), Query Frame = -2
Query:  232 ILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPG--QSKIDTAE 837
            +LD     + NE  +  +         +T    IEW +A+L+ +P+   KLR ELD V+G    + E    +LPYLQA +KET+RL   I +++PH  +   ++ GY +P    + VNA  +  +P  WK             +S +E NG  F+++PFG GRR CP               LV  F    P G    K+D  E
Sbjct:  266 MLDVLIANDFNEHQINAMFMETFGPGSDTNSNIIEWALAQLIKNPDKLAKLREELDRVVGRSSTVKESHFSELPYLQACVKETMRLYPPISIMIPHRCMETCQVMGYTIPKGMDVHVNAHAIGRDPKDWK--DPLKFQPERFLDSDIEYNGKQFQFIPFGSGRRICPGRPLAVRIIPLVLASLVHAFGWELPDGVPNEKLDMEE 467          
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.268e-22
Identity = 60/197 (30.46%), Postives = 93/197 (47.21%), Query Frame = -2
Query:  241 DAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKID 831
            D   +  IN DN+  I+ ++  A  ET+  +  W + E++ +P +  K + E+           E D   L YL+ VIKET+RL   IPLLVP     + ++ GY +P ++K++VN W L  +P  W              +  ++  GN+F YLPFG GRR CP              +L+ +F+   P G    D
Sbjct:  281 DKSLQFPINNDNIKAIIIDMFAAGTETSSTTTVWAMVEMLKNPRVLAKAQAEVREAFRNKVTFDENDVEDLKYLKLVIKETMRLHAPIPLLVPRECRKETEINGYTIPVKTKVMVNVWALGRDPKYW--DDVECFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGTSFGLANDYLPLAQLLCHFDWKLPTGMEPKD 475          
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.268e-22
Identity = 62/222 (27.93%), Postives = 105/222 (47.30%), Query Frame = -2
Query:  157 GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQ--SKIDTAEKGGQFSLHILKHSTIVAKPRSF*FH 816
            G++  +++  I+ N+ +  I T+  ++ W + EL+ +P + KK+++E+   +G    IT  D  +L YL+ VI ET RL    P L+P   + + +L  Y +P ++++ VN W +  +P  WK              S ++A G  F  LPFG GRR CP               ++ +F+   P G     ID  E  G   L+  K + +V  P  +  H
Sbjct:  284 GKLTRNHIKAILMNVLIGGIGTSAITMTWAMTELMRNPRVMKKVQSEIRNQIGKKSMITLDDIDQLHYLKMVINETWRLHPPSPFLIPRQVMSEFELNDYVIPVKTRLYVNVWAIGRDPDTWK--DPEEFLPERFVNSSIDAKGQHFELLPFGSGRRMCPAMYMGTTMVEFGLANMLYHFDWKIPVGMVAEDIDLEESPG---LNASKKNELVLVPLKYLDH 500          
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: CP21A_RAT (Steroid 21-hydroxylase OS=Rattus norvegicus GN=Cyp21 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22
Identity = 62/191 (32.46%), Postives = 93/191 (48.69%), Query Frame = -2
Query:  259 DAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPP 831
            DA+  G+++E +V   V ++ V   ETT  ++ W +A L++HPEIQK+L+ ELD  L P  Q+   +  +LP L A I E LRLR  +P+ +PH     + + GYD+P ++ I+ N      +   W+               +   +G   R   FG G R C               RL+Q F LLPPP
Sbjct:  267 DARDPGQLHERHVHMSVVDLFVGGTETTAATLSWAVAFLLHHPEIQKRLQEELDLKLAPSSQLLYKNRMQLPLLMATIAEVLRLRPVVPMALPHRATKASSISGYDIPKDTIIIPNIQGANLDEMVWE-------LPSKFWPDRFLESGKSPRIPTFGCGARVCLGEPLARLEFFVVLARLLQTFTLLPPP 450          
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: CP17A_SQUAC (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Squalus acanthias GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22
Identity = 56/196 (28.57%), Postives = 98/196 (50.00%), Query Frame = -2
Query:  223 INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKGG 810
            + +D+++  V +I  A +ET+  +  W I  L++HPE+QKK++ E+D+ +G        D   + +L A I E LR++   PLL+PH+ L D+ +G Y +P  +++++N W + ++  +WK             + K   + ++  YLPFG G R C                ++Q F +  PPG    D   K G
Sbjct:  290 LTDDHMVMTVADIFGAGVETSSTAFAWMIIYLIHHPEVQKKIQEEIDSNIGFERTPKMSDKGNMNFLNATIHEILRIQPVSPLLIPHVALADSSIGDYTIPKGTRVIINLWAIHHDEKEWKNPDAFDPGRFLDEDGKYVCSSSE-SYLPFGAGTRVCLGEMLARMELFLFTSWILQRFTVQVPPGYPPPDKEGKFG 484          
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22
Identity = 66/227 (29.07%), Postives = 107/227 (47.14%), Query Frame = -2
Query:  175 IDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLV-PHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEAN--GNDFRYLPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKP 846
            +D +L      ++++ +++ ++  +     +T    IEW +A +  HP +Q K++ ELD V+G    + E D   + YL AV+KE LRL    PLL    ++++D  + GY VPA +  +VN W +  +P  WK                 E +  G+D R  PFG GRR+CP               L+  FE +P        + EKG   +  +LK S+ +A P
Sbjct:  296 VDVLLSLPEPDQLSDSDMIAVLWEMIFRGTDTVAVLIEWILARMALHPHVQSKVQEELDAVVGKARAVAEDDVAVMTYLPAVVKEVLRLHPPGPLLSWARLSINDTTIDGYHVPAGTTAMVNTWAICRDPHVWKDPLEFMPERFVTAGGDAEFSILGSDPRLAPFGSGRRACPGKTLGWATVNFWVASLLHEFEWVP--------SDEKGVDLT-EVLKLSSEMANP 513          
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22
Identity = 54/160 (33.75%), Postives = 91/160 (56.88%), Query Frame = -2
Query:  337 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ-ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCP 813
            ++  D++  ++ +I +A + T+  ++ W I ELV + ++ KK++ E+ T LG   + ITE D   L Y + V+KE  RL  A+P L+P   L   K+ GYD+PA+++I++N + +A +P  W              +S ++  G +F  LPFG GRR CP
Sbjct:  284 KLTTDHLKGMISDIFLAGVSTSASTLIWAITELVRNRKVMKKVQEEIRTTLGDKKERITEQDLTNLHYFKLVVKEIFRLHPAVPFLLPRETLSHVKIQGYDIPAKTQIMINVYAIARDPKLWTN--PDEFNPDRFLDSSIDYKGLNFELLPFGSGRRICP 441          
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22
Identity = 57/164 (34.76%), Postives = 91/164 (55.49%), Query Frame = -2
Query:  337 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDT-----VLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCP 813
            +I   ++ +++ ++ +A  ETT   +EW + EL+ HPE  KKL++E+       +L     I+E D   + YL+AV+KE LRL   +PLLVP     D KL GYD+ A +++++NAW +  +   W              +S V+  G +F ++PFG GRR CP
Sbjct:  283 QIRRSDIKFLILDMFLAGTETTYALLEWIMTELIRHPECMKKLQDEIRAKATKLIL----YISEEDVEDMKYLKAVVKEVLRLHPPLPLLVPRELSEDIKLKGYDIAAGTQVIINAWAIQRDTMTW-GIDAEEFRPERHLDSLVDFRGTNFEFIPFGSGRRICP 441          
BLAST of CF836256 vs. ExPASy Swiss-Prot
Match: CP17A_CHICK (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus gallus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.869e-22
Identity = 52/158 (32.91%), Postives = 88/158 (55.70%), Query Frame = -2
Query:  340 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 813
            E+ +D++L  V +I  A +ETT   ++W +  L+++PE+QKK++ E+D  +G        D   LPYL+A I E LR+R   PLL+PH++L D  +G Y +P  +++++N W + ++  +W K            + +   +     YLPFG G R C
Sbjct:  289 ELTDDHLLMTVGDIFGAGVETTTTVLKWAVLYLLHYPEVQKKIQEEMDQKIGLARHPHLSDRPLLPYLEATISEGLRIRPVSPLLIPHVSLADTSIGEYSIPKGARVVINLWSVHHDEKEWDKPEEFNPGRFLDEQGQ-HIHSPSPSYLPFGAGIRVC 445          
The following BLAST results are available for this feature:
BLAST of CF836256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 337
Match NameE-valueIdentityDescription
C71BZ_ARATH1.737e-2230.50Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C80A1_BERST2.268e-2231.37Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C71D6_SOLCH2.268e-2230.46Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71BX_ARATH2.268e-2227.93Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
CP21A_RAT2.962e-2232.46Steroid 21-hydroxylase OS=Rattus norvegicus GN=Cyp... [more]
CP17A_SQUAC2.962e-2228.57Steroid 17-alpha-hydroxylase/17,20 lyase OS=Squalu... [more]
C78A3_SOYBN2.962e-2229.07Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]
C71BT_ARATH2.962e-2233.75Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71AE_ARATH2.962e-2234.76Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
CP17A_CHICK3.869e-2232.91Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02K19_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02K19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836256 ID=CF836256; Name=CF836256; organism=Citrus sinensis; type=EST; length=853bp
TTTTTTATTGCAATCTTAAATGAAGATTTGAAGATTTAAGTTCACAAATT
TACACTAGTATTACATAACTAGCCAACTGCCACTTGATTTGATCCGACAT
TGAAGAAACCATTCAACCACTTTGAAACAGTCTTAACATTACAACCAAAT
GGAATTGTGAAACTAGAATGATCTAGGCTTGGCAACAATGGTCGAGTGCT
TCAAAATGTGCAAACTGAACTGCCCACCTTTCTCTGCAGTGTCAATCTTA
GATTGACCTGGAGGAGGCAAGAGCTCAAAGTTCTGTACCAAACGCCCAAT
AGTGATACCAAGAATTGGCAAAGCAAGGATAATTCCAGGGCAGCTTCTTC
TTCCAACACCGAAAGGAAGGTAACGGAAGTCATTTCCATTAGCCTCAACC
TTGGACTCCTCCTCCAAAAACCTCTCAGGCCTGAATTCTTCAGGTTTCTT
CCATTGGGCGGGATTGTTGGCGAGCCACCACGCGTTCACTAGGATTTTGC
TCTCAGCAGGGACGTCGTAGCCTCCAAGCTTGGCGTCGTGAAGGTTCATG
TGCGGGACAAGAAGAGGAATTGCCATCCTAAGGCGAAGAGTTTCCTTGAT
CACGGCCTGAAGGTAGGGTAGTTTGTGGGTGTCAGGCTCAGTGATTTGAT
GACCAGGACCAAGCACGGTGTCAAGTTCATTGCGGAGCTTCTTCTGGATT
TCAGGATGATTCACTAGCTCTGCAATTCCCCACTCGATCGACCAAAGAGT
TGTCTCGATTGCGGCAACATTGATGTTCTCAACGATGTATAGAACGTTGT
CCTCGTTGATTTCTCCCTTTGTCTGAGCGTCCAAAATATGATCGATTGCG
CAT
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