CF972317

Overview
NameCF972317
Unique NameCF972317
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length203
Libraries
Library NameType
sweet orange flesh cDNAcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF972317 vs. ExPASy Swiss-Prot
Match: DFRA_DIACA (Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.693e-21
Identity = 46/67 (68.66%), Postives = 58/67 (86.57%), Query Frame = 1 
Query:    1 NEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMY 201
            NE+I+PTINGM+ I+++C  AK +RR+VFTSS GT++VE  +KPVYDET WS LDF+RSVKMTGWMY
Sbjct:  114 NEMIKPTINGMLDILKSCVKAK-LRRVVFTSSGGTVNVEATQKPVYDETCWSALDFIRSVKMTGWMY 179
[Close]
BLAST of CF972317 vs. ExPASy Swiss-Prot
Match: DFRA_CALCH (Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 8.005e-21
Identity = 43/67 (64.18%), Postives = 58/67 (86.57%), Query Frame = 1 
Query:    1 NEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMY 201
            NE+I+PTI G++SI+R+C  AKTV++LV+TSSAGT++V+E + PVYDE+ WSDLDF+ S KMT WMY
Sbjct:   98 NEIIKPTIEGILSIIRSCAKAKTVKKLVYTSSAGTVNVQETQLPVYDESHWSDLDFIYSKKMTAWMY 164
[Close]
BLAST of CF972317 vs. ExPASy Swiss-Prot
Match: DFRA_GERHY (Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.575e-19
Identity = 42/67 (62.69%), Postives = 56/67 (83.58%), Query Frame = 1 
Query:    1 NEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMY 201
            NE+I+PTI G++SI+R+C  AKTV++LVFTSSAGT++ +E +  VYDE+ WSDLDF+ S KMT WMY
Sbjct:   98 NEIIKPTIEGVLSIIRSCVKAKTVKKLVFTSSAGTVNGQEKQLHVYDESHWSDLDFIYSKKMTAWMY 164
The following BLAST results are available for this feature:
BLAST of CF972317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
DFRA_DIACA4.693e-2168.66Dihydroflavonol-4-reductase OS=Dianthus caryophyll... [more]
DFRA_CALCH8.005e-2164.18Dihydroflavonol-4-reductase OS=Callistephus chinen... [more]
DFRA_GERHY2.575e-1962.69Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=... [more]

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Properties
Property NameValue
Genbank descriptionDFR-partial sweet orange flesh cDNA Citrus sinensis cDNA similar to partial dihydroflavonol-4-reductase, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF972317 ID=CF972317; Name=CF972317; organism=Citrus sinensis; type=EST; length=203bp
AATGAAGTGATAAGGCCGACAATAAATGGGATGGTAAGCATCATGAGAGC
GTGTAAAAATGCGAAGACTGTGAGGAGGTTAGTGTTCACATCATCAGCGG
GAACTTTGGATGTTGAGGAGCACCGAAAGCCAGTTTATGATGAAACCTCC
TGGAGTGACTTGGATTTTGTTCGGTCTGTTAAGATGACTGGATGGATGTA
TTT
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