CF972319

Overview
NameCF972319
Unique NameCF972319
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length439
Libraries
Library NameType
sweet orange flesh cDNAcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2293 contig Csv1_Contig2293:569..1005. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF972319 vs. ExPASy Swiss-Prot
Match: UFOG_HORVU (Anthocyanidin 3-O-glucosyltransferase OS=Hordeum vulgare GN=BZ1 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.399e-18
Identity = 56/140 (40.00%), Postives = 83/140 (59.29%), Query Frame = 3 
Query:    6 LTCLVTDAFIWFAAEMARDWNNVPWIPCSPAGPNSLSAHLYTDIIRDKIGTQSQNQDQQLIHFIPGMNKIRVADLPEGVVSGDLDSVFSVMVHQMGRQLPKAA-AVFINSFEELD-PELTNHLKTKFNKKFLSVGPFKLL 419
            ++C+V DAF+W A   A      PW+    A   +L AHL TD +R  +G Q+ ++  +L+    G+   RV DLP+GVVSGD + V S++VH+  ++LPKAA AV +N+F  LD P+L   L  +     L +GP+ LL
Sbjct:  112 VSCVVGDAFVWTAD--AASAAGAPWVAVWTAASCALLAHLRTDALRRDVGDQAASRADELLVAHAGLGGYRVRDLPDGVVSGDFNYVISLLVHRQAQRLPKAATAVALNTFPGLDPPDLIAALAAEL-PNCLPLGPYHLL 248
[Close]
BLAST of CF972319 vs. ExPASy Swiss-Prot
Match: UFOG_SOLME (Anthocyanidin 3-O-glucosyltransferase OS=Solanum melongena GN=GT PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.338e-12
Identity = 47/138 (34.06%), Postives = 69/138 (50.00%), Query Frame = 3 
Query:    9 TCLVTDAFIWFAAEMARDWNNVPWIPCSPAGPNSLSAHLYTDIIRDKIGTQSQNQDQQLIHFIPGMNK-IRVADLPEGVVSGDLDSVFSVMVHQMGRQLPKAAAVFINSFEELDPE-LTNHLKTKFNKKFLSVGPFKL 416
            +C+ +DAF+W          N P +     G  SL+ HLYTD+IR    T  +         IPG +  + + D+P  V + DL+   S M++ M   L KA AV +NSF+ELD + L N    K  +K  ++GP  L
Sbjct:  109 SCIFSDAFLWCFLVKLPKKMNAPGVAYWTGGSCSLAVHLYTDLIRSNKETSLK---------IPGFSSTLSINDIPPEVTAEDLEGPMSSMLYNMALNLHKADAVVLNSFQELDRDPLINKDLQKNLQKVFNIGPLVL 237
The following BLAST results are available for this feature:
BLAST of CF972319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
UFOG_HORVU1.399e-1840.00Anthocyanidin 3-O-glucosyltransferase OS=Hordeum v... [more]
UFOG_SOLME3.338e-1234.06Anthocyanidin 3-O-glucosyltransferase OS=Solanum m... [more]

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Properties
Property NameValue
Genbank descriptionUFGT-partial sweet orange flesh cDNA Citrus sinensis cDNA similar to partial UDP-glucose-flavonoid 3-O-glucosyl transferase, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF972319 ID=CF972319; Name=CF972319; organism=Citrus sinensis; type=EST; length=439bp
GGCCCTTGACTTGTTTGGTAACAGATGCTTTCATTTGGTTTGCTGCAGAG
ATGGCTCGAGATTGGAATAATGTCCCTTGGATTCCATGCTCGCCCGCTGG
CCCCAACTCTCTTTCTGCTCATCTTTACACTGACATTATCAGGGACAAAA
TAGGCACCCAAAGTCAAAATCAAGATCAACAACTTATTCACTTCATTCCA
GGAATGAATAAGATACGCGTCGCCGACTTGCCTGAAGGAGTTGTTTCCGG
AGACTTGGATTCAGTCTTTTCTGTTATGGTGCATCAAATGGGACGTCAGC
TACCCAAGGCAGCTGCTGTTTTCATCAACAGCTTTGAAGAGTTAGACCCT
GAGTTGACAAATCATCTCAAGACTAAATTCAACAAGAAGTTTCTCAGTGT
TGGCCCTTTCAAGCTACTACTAGCATCTGATCAGCAACC
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