CK739460

Overview
NameCK739460
Unique NameCK739460
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length524
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIA1_RHIOR (Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus oryzae GN=cyp2 PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 2.702e-43
Identity = 89/141 (63.12%), Postives = 97/141 (68.79%), Query Frame = 2
Query:   95 SQTKFTFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            S  K  FDV    KP GRIVM L    VP+TAENFRALCTGEKG G       YKG +FHR+IP FMLQ            +SIYG KF DENF LKHTGPG LSMANAGP+TNGSQFFITT+  SWLDG+HVVFG+V  G
Sbjct:    2 SNPKVFFDVSANSKPLGRIVMELRADVVPQTAENFRALCTGEKGFG-------YKGCSFHRVIPEFMLQGGDFTNHNGTGGKSIYGNKFRDENFTLKHTGPGDLSMANAGPNTNGSQFFITTIKCSWLDGKHVVFGRVTEG 135          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIB_GIBZE (Peptidyl-prolyl cis-trans isomerase B OS=Gibberella zeae GN=CPR2 PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 3.529e-43
Identity = 86/138 (62.32%), Postives = 100/138 (72.46%), Query Frame = 2
Query:  104 KFTFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            K  FD+    +P GR+VMGL+GK VP+T ENFRAL TGEKG G       Y+GS FHR+I +FM+Q            +SIYG++F DENFKLKHT  GLLSMANAG DTNGSQFFITTV TSWLDG+HVVFG+VL G
Sbjct:   36 KVYFDITQGDQPLGRVVMGLYGKTVPETTENFRALATGEKGFG-------YEGSAFHRVIKNFMIQGGDFTKGDGTGGKSIYGDRFKDENFKLKHTKKGLLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEG 166          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIA_BLAGE (Peptidyl-prolyl cis-trans isomerase OS=Blattella germanica GN=CYPA PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 3.529e-43
Identity = 87/135 (64.44%), Postives = 96/135 (71.11%), Query Frame = 2
Query:  113 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            FD+   G+P GRIVM L    VPKTAENFRALCTGEKG G       YKGS FHR+IP+FM Q            +SIYG KF DENF+LKHTGPG+L MANAGP+TNGSQFFITT  TSWLD RHVVFG V+ G
Sbjct:    8 FDMSADGQPVGRIVMELRSDVVPKTAENFRALCTGEKGFG-------YKGSRFHRVIPNFMCQGGDFTNHNGTGGKSIYGTKFEDENFQLKHTGPGILWMANAGPNTNGSQFFITTAKTSWLDNRHVVFGSVVEG 135          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIB_HUMAN (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 173.711 bits (439), Expect = 4.609e-43
Identity = 86/142 (60.56%), Postives = 98/142 (69.01%), Query Frame = 2
Query:   92 KSQTKFTFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            K   K  FD+ I  +  GR++ GLFGK VPKT +NF AL TGEKG G       YK S FHR+I  FM+Q            +SIYGE+FPDENFKLKH GPG +SMANAG DTNGSQFFITTV T+WLDG+HVVFGKVL G
Sbjct:   41 KVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEG 175          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIB_BOVIN (Peptidyl-prolyl cis-trans isomerase B OS=Bos taurus GN=PPIB PE=1 SV=4)

HSP 1 Score: 173.711 bits (439), Expect = 4.609e-43
Identity = 87/142 (61.27%), Postives = 99/142 (69.72%), Query Frame = 2
Query:   92 KSQTKFTFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            K   K  FD+ I  +  GR+V+GLFGK VPKT +NF AL TGEKG G       YK S FHR+I  FM+Q            +SIYGE+FPDENFKLKH GPG +SMANAG DTNGSQFFITTV T+WLDG+HVVFGKVL G
Sbjct:   41 KVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFG-------YKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEG 175          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIA_SAGOE (Peptidyl-prolyl cis-trans isomerase A OS=Saguinus oedipus GN=PPIA PE=3 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 6.019e-43
Identity = 87/135 (64.44%), Postives = 95/135 (70.37%), Query Frame = 2
Query:  113 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI TV T WLDG+HVVFGKV  G
Sbjct:    8 FDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTVKTEWLDGKHVVFGKVKEG 135          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPIA_AOTTR (Peptidyl-prolyl cis-trans isomerase A OS=Aotus trivirgatus GN=PPIA PE=2 SV=3)

HSP 1 Score: 173.326 bits (438), Expect = 6.019e-43
Identity = 87/135 (64.44%), Postives = 95/135 (70.37%), Query Frame = 2
Query:  113 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            FD+ + G+P GR+   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI TV T WLDG+HVVFGKV  G
Sbjct:    8 FDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTVKTEWLDGKHVVFGKVKEG 135          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 6.019e-43
Identity = 86/141 (60.99%), Postives = 100/141 (70.92%), Query Frame = 2
Query:  104 KFTFDVEIA---GKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            K  FD+ +    GK AGRIV+GL+G  VP+T ENFRALCTGEKG G       YKGSTFHR+I  FM+Q            +S+YG  F DENFKL H GPG+LSMANAGP+TNGSQFFI T+ TSWLDGRHVVFG+V+ G
Sbjct:   91 KVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFG-------YKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEG 224          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPID_DEBHA (Peptidyl-prolyl cis-trans isomerase D OS=Debaryomyces hansenii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 7.861e-43
Identity = 89/144 (61.81%), Postives = 101/144 (70.14%), Query Frame = 2
Query:   89 KKSQTKFTFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKS-GKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            K ++ K  FD+   GKP GR+V  L+   VPKTAENFRALCTGEKG  +S GK LHYKGS FHRII  FM Q            ESIYGEKF DENF+L H  P LLSMANAG +TNGSQFFITTV T  L+G+HVVFG+V+ G
Sbjct:    4 KLNRPKVFFDISADGKPKGRVVFELYNDVVPKTAENFRALCTGEKGASESSGKQLHYKGSIFHRIIKDFMCQGGDFTHGSGIGGESIYGEKFEDENFQLTHDKPFLLSMANAGANTNGSQFFITTVPTPHLNGKHVVFGEVIQG 147          
BLAST of CK739460 vs. ExPASy Swiss-Prot
Match: PPID_AMAMU (Peptidyl-prolyl cis-trans isomerase D OS=Amanita muscaria GN=Cyp40 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.027e-42
Identity = 84/135 (62.22%), Postives = 97/135 (71.85%), Query Frame = 2
Query:  113 FDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG 517
            FD+ I G+ AGR+   L+   VPKTAENFRALCTGEKG+G+SGKPL YKGS FHR+I  FM Q            ESIYGEKF DE F + H+ P LLSMANAGP+TNGSQFFIT   T  LDG+HVVFG+V+ G
Sbjct:    9 FDIAIGGQLAGRVAFRLYSDLVPKTAENFRALCTGEKGLGQSGKPLWYKGSAFHRVIKGFMCQGGDFTAGNGTGGESIYGEKFEDEGFPVHHSRPFLLSMANAGPNTNGSQFFITVSATPHLDGKHVVFGEVIKG 143          
The following BLAST results are available for this feature:
BLAST of CK739460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 233
Match NameE-valueIdentityDescription
PPIA1_RHIOR2.702e-4363.12Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus... [more]
PPIB_GIBZE3.529e-4362.32Peptidyl-prolyl cis-trans isomerase B OS=Gibberell... [more]
PPIA_BLAGE3.529e-4364.44Peptidyl-prolyl cis-trans isomerase OS=Blattella g... [more]
PPIB_HUMAN4.609e-4360.56Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]
PPIB_BOVIN4.609e-4361.27Peptidyl-prolyl cis-trans isomerase B OS=Bos tauru... [more]
PPIA_SAGOE6.019e-4364.44Peptidyl-prolyl cis-trans isomerase A OS=Saguinus ... [more]
PPIA_AOTTR6.019e-4364.44Peptidyl-prolyl cis-trans isomerase A OS=Aotus tri... [more]
CP20B_ARATH6.019e-4360.99Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
PPID_DEBHA7.861e-4361.81Peptidyl-prolyl cis-trans isomerase D OS=Debaryomy... [more]
PPID_AMAMU1.027e-4262.22Peptidyl-prolyl cis-trans isomerase D OS=Amanita m... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5922 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE56G02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739460 ID=CK739460; Name=CK739460; organism=Citrus sinensis; type=EST; length=524bp
AATTTGCTTCCACTCACGATGCTATGGGCTGTTGTCCTGTTGGCCACTTT
CTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCACAA
ACAAAGTTTACCTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTAT
TGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCC
GAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTC
CACTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCA
AGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATG
GAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGG
CTTTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTT
CATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTG
GAAAGGTGCTATCGGGGAATGGAT
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