CK739461

Overview
NameCK739461
Unique NameCK739461
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length383
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.854e-17
Identity = 51/127 (40.16%), Postives = 72/127 (56.69%), Query Frame = 1
Query:    1 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            F L   APD       TR+ GTFGY APEYA+TG++  K DV+SFGV+L+EL+TGRK +D         LVTW     +++D  ++ +D  +  D    A ++ +A +A  C   E   RP+M  VV
Sbjct:  222 FDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHRLPRGQQSLVTW-ATPKLSEDKVKQCVDARLGGDYPPKA-VAKLAAVAALCVQYEADFRPNMSIVV 346          
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.854e-17
Identity = 45/127 (35.43%), Postives = 76/127 (59.84%), Query Frame = 1
Query:    1 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            FGL +L      + + TR+ GTFGY+APEYA TG +  K D++SFG+++ME+ITGR  +D ++ +   +LV W + M  N+ +  + +D  I  +  +  ++  V  +A  C   +  +RP MGH++
Sbjct:  299 FGLAKLLGSESSY-VTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDWLKSMVGNRRS-EEVVDPKIP-EPPSSKALKRVLLVALRCVDPDANKRPKMGHII 422          
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 3.163e-17
Identity = 47/127 (37.01%), Postives = 69/127 (54.33%), Query Frame = 1
Query:    1 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            FGL +L P + K  + TR+ GT+GY APEY  TG +  K DVF+FGV+L+E++TG  A +  +      LV W R    NK   ++ +D+ I   + T    + +A +   C   +P  RP M  VV
Sbjct:  237 FGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLVDWLRPELSNKHRVKQIMDKGIK-GQYTTKVATEMARITLSCIEPDPKNRPHMKEVV 362          
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 5.395e-17
Identity = 49/127 (38.58%), Postives = 67/127 (52.76%), Query Frame = 1
Query:    1 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            FGL +L  D   H I TR+AGT GYLAPEYA+ G +T K DV++FGV+ +EL++GR   DE   E+  +L+ W   +H          D+  D + E    +  +A L   C       RP M  VV
Sbjct:  837 FGLAKLYDDKKTH-ISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEEEKKYLLEWAWNLHEKSRDIELIDDKLTDFNMEEAKRMIGIALL---CTQTSHALRPPMSRVV 959          
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.046e-17
Identity = 47/126 (37.30%), Postives = 72/126 (57.14%), Query Frame = 1
Query:    4 GLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            GL  L P N +  + T++ G+FGY APE+A++G  T K DV++FGV+++EL+TGRK LD +++     LV W      + D   K +D +++       S+S  A++   C   EP  RP M  VV
Sbjct:  543 GLAALTP-NTERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRTRAEQSLVRWATPQLHDIDALSKMVDPSLN-GMYPAKSLSRFADIIALCIQPEPEFRPPMSEVV 666          
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.046e-17
Identity = 47/127 (37.01%), Postives = 76/127 (59.84%), Query Frame = 1
Query:    1 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            FGL +L  D   H I T +AGTFGYLAPEY  +GR T K DV+SFGV+++E+++G++  D +  E  +++V W + + I++   R  +D   + +   + S+  +  +A  C +  P +RP M  VV
Sbjct:  448 FGLAKLLEDEESH-ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNVVGWLKFL-ISEKRPRDIVDP--NCEGMQMESLDALLSIATQCVSPSPEERPTMHRVV 570          
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.046e-17
Identity = 48/130 (36.92%), Postives = 71/130 (54.62%), Query Frame = 1
Query:    1 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTID---LDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            FGL R  P      + TR+ GT+GY APEY  +G +  + DV+SFGV+L+E+++G++ALD  +     +LV W R    +K      +D  +D   L EE +     +A +A  C + EP  RP M  VV
Sbjct:  221 FGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENLVDWARPYLTSKRKVLLIVDNRLDTQYLPEEAV----RMASVAVQCLSFEPKSRPTMDQVV 346          
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.050e-16
Identity = 47/127 (37.01%), Postives = 75/127 (59.06%), Query Frame = 1
Query:    1 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            FGL +L  D   H I T +AGTFGYLAPEY  +GR T K DV+SFGV+++E+++G+   D +  E   ++V W   + I+++  ++ +D + +  E    S+  +  +A  C +  P +RP M  VV
Sbjct:  446 FGLAKLLEDEESH-ITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGWLNFL-ISENRAKEIVDLSCEGVER--ESLDALLSIATKCVSSSPDERPTMHRVV 568          
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.497e-16
Identity = 49/129 (37.98%), Postives = 73/129 (56.59%), Query Frame = 1
Query:    1 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTI--DLDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            FGL +L  D   H I TR+AGT GY+APEYA+ G +T K DV+SFGV+ +E+++G+   +   +ED V+L+ W   +   + +  + +D T+  D  EE    +  VA +   C    P  RP M  VV
Sbjct:  824 FGLAKLNDDGNTH-ISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFRPTEDFVYLLDWAYVLQ-ERGSLLELVDPTLASDYSEEEAMLMLNVALM---CTNASPTLRPTMSQVV 947          
BLAST of CK739461 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.497e-16
Identity = 46/127 (36.22%), Postives = 66/127 (51.97%), Query Frame = 1
Query:    1 FGLVRLAPDNGKHSIETRLAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQSEDSVHLVTWFRRMHINKDTFRKAIDRTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHVV 381
            FGL +  P      + T++ GT GY APEY  TGR+T K DV+SFGV+L+ELI+GR+A+D +   +   LV W      +K    + +D  +   +       T A LA  C   +   RP M  V+
Sbjct:  238 FGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATPYLGDKRKLFRIMDTKLG-GQYPQKGAFTAANLALQCLNPDAKLRPKMSEVL 363          
The following BLAST results are available for this feature:
BLAST of CK739461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
Y2706_ARATH1.854e-1740.16Probable receptor-like protein kinase At2g47060 OS... [more]
Y1154_ARATH1.854e-1735.43Probable serine/threonine-protein kinase At1g01540... [more]
CX32_ARATH3.163e-1737.01Probable serine/threonine-protein kinase Cx32, chl... [more]
Y1561_ARATH5.395e-1738.58Probable LRR receptor-like serine/threonine-protei... [more]
SRF8_ARATH7.046e-1737.30Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
FEI1_ARATH7.046e-1737.01LRR receptor-like serine/threonine-protein kinase ... [more]
BIK1_ARATH7.046e-1736.92Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
FEI2_ARATH2.050e-1637.01LRR receptor-like serine/threonine-protein kinase ... [more]
Y1765_ARATH3.497e-1637.98Probable LRR receptor-like serine/threonine-protei... [more]
APK2A_ARATH3.497e-1636.22Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5923 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE56G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739461 ID=CK739461; Name=CK739461; organism=Citrus sinensis; type=EST; length=383bp
TTTGGATTGGTTCGTCTAGCACCAGATAATGGAAAGCATTCAATTGAGAC
CAGACTAGCTGGAACTTTCGGCTATCTTGCTCCAGAATATGCTGTGACTG
GACGAGTGACTACAAAGGTTGATGTGTTTAGCTTTGGAGTTATTTTAATG
GAGTTAATCACGGGTAGAAAGGCTCTCGATGAAACCCAGTCTGAGGACAG
TGTGCACCTTGTAACATGGTTCCGCAGAATGCATATTAATAAGGACACAT
TCCGGAAGGCAATTGATCGAACAATTGATCTTGATGAAGAAACCCTTGCT
AGTATAAGCACTGTGGCTGAGCTGGCTGGTCACTGCTGCGCAAGGGAGCC
CTACCAGAGGCCTGATATGGGTCATGTCGTTAA
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