CK739463

Overview
NameCK739463
Unique NameCK739463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length511
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.817e-26
Identity = 73/175 (41.71%), Postives = 97/175 (55.43%), Query Frame = 2
Query:    5 FLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMREEDYPYTGTDRGHACKFDKSK----IAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            +LA  +LVSLSEQQLV CD   D         GC+GGLM  AF++ L+   G L  E+ YPY  +  G+  +   S     + A +    ++   E  +AA L KNGP+A+A++A    +Y  GV    I  ++L+HGVLLVGY   G       E PYW+IKNSWG  WGE GY
Sbjct:  164 YLAGHELVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGHLHTEDSYPYV-SGNGYVPECSNSSEELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGY 320          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.817e-26
Identity = 69/167 (41.32%), Postives = 94/167 (56.29%), Query Frame = 2
Query:   20 KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            KL+ LSEQQL+DCD           D GCNGGLM+ AF+  L  GG+  E DYPY G+++   C  D  KIA  + + F     DE+++   +   GP+A+A++A+ +  Y  G+   C       L+H VLL+G+G     P       YWIIKNSWGE WGENG+
Sbjct:  199 KLIDLSEQQLLDCDE---------VDLGCNGGLMHLAFQELLLMGGVETEADYPYQGSEQ--MCTLDNRKIAVKLNSCFKYDIRDENKLKELVYTTGPVAIAVDAMDIINYRRGILNQCHIY---DLNHAVLLIGWGIENNVP-------YWIIKNSWGEDWGENGF 344          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 3.678e-26
Identity = 69/172 (40.12%), Postives = 91/172 (52.91%), Query Frame = 2
Query:    2 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            N + TG+L+SLSEQ+LVDCD         S + GCNGGLM+ AF++ +K GGL  E+DYPY G   G    F K+    S+  +  V   ++      +   P++VAI A     Q Y  G+     C   LDH V+ VGYGS            YWI++NSWG  WGE GY
Sbjct:  182 NKIVTGELISLSEQELVDCDK--------SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFG-GKCNSFLKNSRVVSIDGYEDVPTKDETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTG-SCGTNLDHAVVAVGYGSENGV-------DYWIVRNSWGPRWGEEGY 336          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 4.804e-26
Identity = 67/172 (38.95%), Postives = 96/172 (55.81%), Query Frame = 2
Query:    2 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            N L TG++++LSEQ+LV+C            +SGCNGGLM+ AF++ +K GG+  E+DYPY   D       + +K+  S+  F  V  ++++     V + P++VAI A     Q Y  GV     C   LDHGV+ VGYG+          K YWI++NSWG  WGE+GY
Sbjct:  178 NQLVTGEMITLSEQELVECS-------TNGQNSGCNGGLMDDAFDFIIKNGGIDTEDDYPYKAVDGKCDINRENAKV-VSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGREFQLYHSGVFSGR-CGTSLDHGVVAVGYGTD-------NGKDYWIVRNSWGPKWGESGY 333          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 4.804e-26
Identity = 69/172 (40.12%), Postives = 94/172 (54.65%), Query Frame = 2
Query:    2 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            N + TG+LVSLSEQ+LVDCD         S + GCNGGLM+ AF++ +K GGL  E+DYPY GT+ G      K+    ++  +  V   ++      V   P++VAI+A     Q Y  G+     C   +DH V+ VGYGS            YWI++NSWG  WGE+GY
Sbjct:  137 NKIVTGELVSLSEQELVDCDK--------SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTN-GKCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGK-CGTNMDHAVVAVGYGSENGV-------DYWIVRNSWGTRWGEDGY 291          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 6.275e-26
Identity = 70/172 (40.70%), Postives = 93/172 (54.07%), Query Frame = 2
Query:    2 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            N + TG+LVSLSEQ+LV+C            +SGCNGG+M+ AF +  + GGL  EEDYPYT  D G      +S+   S+  F  V  +++      V + P++VAI+A     Q Y  GV     C   LDHGV+ VGYG+            YW ++NSWG  WGENGY
Sbjct:  193 NKIVTGELVSLSEQELVECARNGQ-------NSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMD-GKCNLAKRSRKVVSIDGFEDVPENDELSLQKAVAHQPVSVAIDAGGREFQLYDSGVFTGR-CGTNLDHGVVAVGYGTDA-----ATGAAYWTVRNSWGPDWGENGY 350          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 6.275e-26
Identity = 69/172 (40.12%), Postives = 91/172 (52.91%), Query Frame = 2
Query:    5 FLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            F  TG+L+SLSEQ LVDC      E       GCNGGLM+ AF+Y    GGL  EE YPY  T+   +CK++     A+   F  +   E  +   +   GP++VAI+A +     Y  G+     CS   +DHGVL+VGY   G+         YW++KNSWGE WG  GY
Sbjct:  152 FRKTGRLISLSEQNLVDCSGPQGNE-------GCNGGLMDYAFQYVQDNGGLDSEESYPYEATE--ESCKYNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGY---GFESTESDNNKYWLVKNSWGEEWGMGGY 311          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.070e-25
Identity = 63/171 (36.84%), Postives = 94/171 (54.97%), Query Frame = 2
Query:    8 LATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GPLAVAINAVYMQ--TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            L TGKLVSLS Q LVDC  +         + GCNGG M  AF+Y +   G+  E  YPY  TD+   C++D    AA+ + ++ +    + +    V N GP+ V ++A +     Y  GV     C+++++HGVL++GYG        +  K YW++KNSWG ++GE GY
Sbjct:  154 LKTGKLVSLSAQNLVDCSEKYG-------NKGCNGGFMTEAFQYIIDNKGIDSEASYPYKATDQ--KCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVCVGVDASHPSFFLYRSGVYYDPACTQKVNHGVLVIGYGD-------LNGKEYWLVKNSWGSNFGEQGY 308          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.826e-25
Identity = 67/172 (38.95%), Postives = 91/172 (52.91%), Query Frame = 2
Query:    5 FLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            F  TG+LV LSEQ L+DC          +    C+GG M +AF+Y    GGL  EE YPY G   G  C++     AA+V +F  +   E+ +   + K GP++VA++A +   Q Y  G+     C R  L+H VL+VGYG  G          YW++KNSWGE WG  GY
Sbjct:  152 FKKTGRLVPLSEQNLLDC-------MGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPYIGP--GRKCRYHAENSAANVRDFVQIPGREEALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKRVHLNHAVLVVGYGFEGE---ESDGNSYWLVKNSWGEEWGMKGY 311          
BLAST of CK739463 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 1.826e-25
Identity = 71/173 (41.04%), Postives = 95/173 (54.91%), Query Frame = 2
Query:    2 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDK-SKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRVKEKPYWIIKNSWGESWGENGY 511
            N + T KLV+LSEQ+LVDCD E +         GCNGGLM SAFE+  + GG+  E +YPY   +    C   K + +A S+     V  +++      V N P++VAI+A     Q Y  GV     CS  L+HGV +VGYG+       V    YWI++NSWG  WGE+GY
Sbjct:  165 NQIKTNKLVALSEQELVDCDKEEN--------QGCNGGLMESAFEFIKQKGGITTESNYPYKAQE--GTCDASKVNDLAVSIDGHENVPANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG-DCSTDLNHGVAIVGYGTT------VDGTNYWIVRNSWGPEWGEHGY 320          
The following BLAST results are available for this feature:
BLAST of CK739463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CYSP2_LEIPI2.817e-2641.71Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CATV_NPVHZ2.817e-2641.32Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
GCP1_ARATH3.678e-2640.12Germination-specific cysteine protease 1 OS=Arabid... [more]
ORYB_ORYSJ4.804e-2638.95Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CYSP4_BRANA4.804e-2640.12Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CYSP1_ORYSJ6.275e-2640.70Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CATL1_HUMAN6.275e-2640.12Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
CATS_SAIBB1.070e-2536.84Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
TEST2_MOUSE1.826e-2538.95Testin-2 OS=Mus musculus PE=2 SV=1[more]
CYSEP_PHAVU1.826e-2541.04Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5925 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE56G06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739463 ID=CK739463; Name=CK739463; organism=Citrus sinensis; type=EST; length=511bp
TAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTGAGCAACAGCTTG
TGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGTTCTTGTGATTCT
GGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTACACACTCAAGGC
TGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCGGCACTGATCGTG
GCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCCTCAGTGGCCAAC
TTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGCCAATCTTGTGAA
AAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACATGCAGACATACA
TTGGGGGAGTTTCCTGCCCATACATATGCTCGAGGCGATTGGACCATGGA
GTGTTGCTCGTGGGATACGGGTCAGCTGGCTATGCTCCAATCAGGGTGAA
GGAGAAGCCATACTGGATCATCAAGAATTCATGGGGTGAGAGCTGGGGAG
AGAACGGATAC
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