CK739508
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_DRANE (30S ribosomal protein S18, chloroplastic OS=Draba nemorosa GN=rps18 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.327e-18 Identity = 47/57 (82.46%), Postives = 50/57 (87.72%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 173 KILSRRVNR+TLK+QRLITIAIKQARILS LPFLNN+KQFERS T R LRTRKK Sbjct: 45 KILSRRVNRVTLKQQRLITIAIKQARILSLLPFLNNQKQFERSESTPRTTSLRTRKK 101
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_DAUCA (30S ribosomal protein S18, chloroplastic OS=Daucus carota GN=rps18 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.327e-18 Identity = 47/57 (82.46%), Postives = 49/57 (85.96%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 173 KILSRRVNRLTLK+QRLITIAIKQARILS LPFLNNEKQFER+ T R GLR R K Sbjct: 45 KILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERTESTTRTAGLRARNK 101
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_CRUWA (30S ribosomal protein S18, chloroplastic OS=Crucihimalaya wallichii GN=rps18 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.327e-18 Identity = 47/57 (82.46%), Postives = 50/57 (87.72%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 173 KILSRRVNR+TLK+QRLITIAIKQARILS LPFLNN+KQFERS T R LRTRKK Sbjct: 45 KILSRRVNRVTLKQQRLITIAIKQARILSLLPFLNNQKQFERSESTPRTTSLRTRKK 101
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_CAPBU (30S ribosomal protein S18, chloroplastic OS=Capsella bursa-pastoris GN=rps18 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.327e-18 Identity = 47/57 (82.46%), Postives = 50/57 (87.72%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 173 KILSRRVNR+TLK+QRLITIAIKQARILS LPFLNN+KQFERS T R LRTRKK Sbjct: 45 KILSRRVNRVTLKQQRLITIAIKQARILSLLPFLNNQKQFERSESTPRTTSLRTRKK 101
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_BARVE (30S ribosomal protein S18, chloroplastic OS=Barbarea verna GN=rps18 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.327e-18 Identity = 47/57 (82.46%), Postives = 50/57 (87.72%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 173 KILSRRVNR+TLK+QRLITIAIKQARILS LPFLNN+KQFERS T R LRTRKK Sbjct: 45 KILSRRVNRVTLKQQRLITIAIKQARILSLLPFLNNQKQFERSESTPRTTSLRTRKK 101
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_ARATH (30S ribosomal protein S18, chloroplastic OS=Arabidopsis thaliana GN=rps18 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.327e-18 Identity = 47/57 (82.46%), Postives = 50/57 (87.72%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 173 KILSRRVNR+TLK+QRLITIAIKQARILS LPFLNN+KQFERS T R LRTRKK Sbjct: 45 KILSRRVNRVTLKQQRLITIAIKQARILSLLPFLNNQKQFERSESTPRTTSLRTRKK 101
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_SOYBN (30S ribosomal protein S18, chloroplastic OS=Glycine max GN=rps18 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.079e-17 Identity = 47/56 (83.93%), Postives = 50/56 (89.29%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRK 170 KILSRRVNRLTLK+QRLITIAIKQARILSSLPFLNNEKQFE+S TAR LR +K Sbjct: 45 KILSRRVNRLTLKQQRLITIAIKQARILSSLPFLNNEKQFEKSESTARTTTLRKKK 100
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_AETCO (30S ribosomal protein S18, chloroplastic OS=Aethionema cordifolium GN=rps18 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.079e-17 Identity = 46/57 (80.70%), Postives = 50/57 (87.72%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 173 KILSRRVNR+TLK+QRLITIAIKQARILS LPF+NN+KQFERS T R LRTRKK Sbjct: 45 KILSRRVNRVTLKQQRLITIAIKQARILSLLPFINNQKQFERSESTPRTTSLRTRKK 101
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_EUCGG (30S ribosomal protein S18, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rps18 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.410e-17 Identity = 48/57 (84.21%), Postives = 49/57 (85.96%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 173 KILSRRVNRLTLK+QRLITIAIKQARILS LPFLNNEKQFERS TA GLRT K Sbjct: 45 KILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERSESTAGATGLRTINK 101
BLAST of CK739508 vs. ExPASy Swiss-Prot
Match: RR18_CERDE (30S ribosomal protein S18, chloroplastic OS=Ceratophyllum demersum GN=rps18 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 1.410e-17 Identity = 47/57 (82.46%), Postives = 49/57 (85.96%), Query Frame = 3 Query: 3 KILSRRVNRLTLKEQRLITIAIKQARILSSLPFLNNEKQFERSGLTARPPGLRTRKK 173 KILSRRVNRLTLK+QRLITIAIKQARILSSLPFLNNEKQFER+ R G RTR K Sbjct: 45 KILSRRVNRLTLKQQRLITIAIKQARILSSLPFLNNEKQFERTESIPRATGPRTRNK 101 The following BLAST results are available for this feature:
BLAST of CK739508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739508 ID=CK739508; Name=CK739508; organism=Citrus sinensis; type=EST; length=306bpback to top |