CK739514

Overview
NameCK739514
Unique NameCK739514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length352
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK739514 vs. ExPASy Swiss-Prot
Match: SUFS_YERPY (Cysteine desulfurase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=sufS PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.070e-20
Identity = 49/117 (41.88%), Postives = 71/117 (60.68%), Query Frame = 2 
Query:    2 IVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLL 352
            IVPWQ++AQ  G  ++   L      ++  L  ++   T+L+ +  +SN+L ++ PI++IV  +   G  VLVD  Q+V H  VDVQ L  DF V S HK+ GP+GIG L+GKS LL
Sbjct:  127 IVPWQMLAQDLGVEIRVWPLTATGELEITALAALIDDTTRLLAVTQVSNVLGTVNPIKDIVAQAKAAGLVVLVDGAQAVMHQPVDVQALGCDFYVFSGHKLYGPSGIGILYGKSALL 243
[Close]
BLAST of CK739514 vs. ExPASy Swiss-Prot
Match: SUFS_YERPP (Cysteine desulfurase OS=Yersinia pestis (strain Pestoides F) GN=sufS PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.070e-20
Identity = 49/117 (41.88%), Postives = 71/117 (60.68%), Query Frame = 2 
Query:    2 IVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLL 352
            IVPWQ++AQ  G  ++   L      ++  L  ++   T+L+ +  +SN+L ++ PI++IV  +   G  VLVD  Q+V H  VDVQ L  DF V S HK+ GP+GIG L+GKS LL
Sbjct:  127 IVPWQMLAQDLGVEIRVWPLTATGELEITALAALIDDTTRLLAVTQVSNVLGTVNPIKDIVAQAKAAGLVVLVDGAQAVMHQPVDVQALGCDFYVFSGHKLYGPSGIGILYGKSALL 243
[Close]
BLAST of CK739514 vs. ExPASy Swiss-Prot
Match: SUFS_YERPN (Cysteine desulfurase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=sufS PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.070e-20
Identity = 49/117 (41.88%), Postives = 71/117 (60.68%), Query Frame = 2 
Query:    2 IVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLL 352
            IVPWQ++AQ  G  ++   L      ++  L  ++   T+L+ +  +SN+L ++ PI++IV  +   G  VLVD  Q+V H  VDVQ L  DF V S HK+ GP+GIG L+GKS LL
Sbjct:  127 IVPWQMLAQDLGVEIRVWPLTATGELEITALAALIDDTTRLLAVTQVSNVLGTVNPIKDIVAQAKAAGLVVLVDGAQAVMHQPVDVQALGCDFYVFSGHKLYGPSGIGILYGKSALL 243
[Close]
BLAST of CK739514 vs. ExPASy Swiss-Prot
Match: SUFS_YERPG (Cysteine desulfurase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=sufS PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.070e-20
Identity = 49/117 (41.88%), Postives = 71/117 (60.68%), Query Frame = 2 
Query:    2 IVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLL 352
            IVPWQ++AQ  G  ++   L      ++  L  ++   T+L+ +  +SN+L ++ PI++IV  +   G  VLVD  Q+V H  VDVQ L  DF V S HK+ GP+GIG L+GKS LL
Sbjct:  127 IVPWQMLAQDLGVEIRVWPLTATGELEITALAALIDDTTRLLAVTQVSNVLGTVNPIKDIVAQAKAAGLVVLVDGAQAVMHQPVDVQALGCDFYVFSGHKLYGPSGIGILYGKSALL 243
[Close]
BLAST of CK739514 vs. ExPASy Swiss-Prot
Match: SUFS_YERPE (Cysteine desulfurase OS=Yersinia pestis GN=sufS PE=3 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 3.070e-20
Identity = 49/117 (41.88%), Postives = 71/117 (60.68%), Query Frame = 2 
Query:    2 IVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLL 352
            IVPWQ++AQ  G  ++   L      ++  L  ++   T+L+ +  +SN+L ++ PI++IV  +   G  VLVD  Q+V H  VDVQ L  DF V S HK+ GP+GIG L+GKS LL
Sbjct:  127 IVPWQMLAQDLGVEIRVWPLTATGELEITALAALIDDTTRLLAVTQVSNVLGTVNPIKDIVAQAKAAGLVVLVDGAQAVMHQPVDVQALGCDFYVFSGHKLYGPSGIGILYGKSALL 243
[Close]
BLAST of CK739514 vs. ExPASy Swiss-Prot
Match: SUFS_YERPA (Cysteine desulfurase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=sufS PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.070e-20
Identity = 49/117 (41.88%), Postives = 71/117 (60.68%), Query Frame = 2 
Query:    2 IVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLL 352
            IVPWQ++AQ  G  ++   L      ++  L  ++   T+L+ +  +SN+L ++ PI++IV  +   G  VLVD  Q+V H  VDVQ L  DF V S HK+ GP+GIG L+GKS LL
Sbjct:  127 IVPWQMLAQDLGVEIRVWPLTATGELEITALAALIDDTTRLLAVTQVSNVLGTVNPIKDIVAQAKAAGLVVLVDGAQAVMHQPVDVQALGCDFYVFSGHKLYGPSGIGILYGKSALL 243
[Close]
BLAST of CK739514 vs. ExPASy Swiss-Prot
Match: SUFS_YERPS (Cysteine desulfurase OS=Yersinia pseudotuberculosis GN=sufS PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.839e-20
Identity = 49/117 (41.88%), Postives = 70/117 (59.83%), Query Frame = 2 
Query:    2 IVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLL 352
            IVPWQ++AQ  G  ++   L       +  L  ++   T+L+ +  +SN+L ++ PI++IV  +   G  VLVD  Q+V H  VDVQ L  DF V S HK+ GP+GIG L+GKS LL
Sbjct:  127 IVPWQMLAQDLGVEIRVWPLTATGELKITALAALIDDTTRLLAVTQVSNVLGTVNPIKDIVAQAKAAGLVVLVDGAQAVMHQPVDVQALGCDFYVFSGHKLYGPSGIGILYGKSALL 243
[Close]
BLAST of CK739514 vs. ExPASy Swiss-Prot
Match: SUFS_YERPB (Cysteine desulfurase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=sufS PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.839e-20
Identity = 49/117 (41.88%), Postives = 70/117 (59.83%), Query Frame = 2 
Query:    2 IVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLL 352
            IVPWQ++AQ  G  ++   L       +  L  ++   T+L+ +  +SN+L ++ PI++IV  +   G  VLVD  Q+V H  VDVQ L  DF V S HK+ GP+GIG L+GKS LL
Sbjct:  127 IVPWQMLAQDLGVEIRVWPLTATGELKITALAALIDDTTRLLAVTQVSNVLGTVNPIKDIVAQAKAAGLVVLVDGAQAVMHQPVDVQALGCDFYVFSGHKLYGPSGIGILYGKSALL 243
[Close]
BLAST of CK739514 vs. ExPASy Swiss-Prot
Match: SUFS_WIGBR (Cysteine desulfurase OS=Wigglesworthia glossinidia brevipalpis GN=sufS PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.166e-19
Identity = 46/118 (38.98%), Postives = 76/118 (64.41%), Query Frame = 2 
Query:    2 IVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHW-SHDVGAKVLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLL 352
            IVPWQL++ +   ++K++ L      D+ K+ ++++  T++  I H+SN+L +   IE+I+    ++   KVL+D  Q++ HM +DVQ +D DF V S HK+ GP+GIG L+GK  LL
Sbjct:  127 IVPWQLLSMRKKVDIKYIPLLPSGKLDICKIDDIINNNTRIFCITHVSNILGTCNLIEKIIKKIKNNYDIKVLIDGAQAIMHMKIDVQKIDCDFYVFSGHKIYGPSGIGVLYGKKKLL 244
[Close]
BLAST of CK739514 vs. ExPASy Swiss-Prot
Match: SUFS_PHOLL (Cysteine desulfurase OS=Photorhabdus luminescens subsp. laumondii GN=sufS PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.523e-19
Identity = 46/123 (37.40%), Postives = 75/123 (60.98%), Query Frame = 2 
Query:    2 IVPWQLVAQKTGANLKFLNLNDDESPDLDKLKEMLSRKTKLVVIHHISNMLASILPIEEIVHWSHDVGAK------VLVDACQSVPHMVVDVQGLDADFLVASSHKMCGPTGIGFLFGKSDLL 352
            IVPW ++A++ G  ++   LN++   D   L  ++  +TKL+   H+SN+L ++ P+ +I+  +  +  +      +LVD  Q++ H  +DVQ LD DF V SSHK+ GPTGIG L+G+  LL
Sbjct:  127 IVPWYMLAEQIGFEIRVWPLNENGELDQAILASLIDSRTKLLSFTHLSNVLGTVNPVRQIIKQARKLADEQEGRLHILVDGAQAIMHKQIDVQDLDCDFYVFSSHKLYGPTGIGVLYGRKSLL 249
The following BLAST results are available for this feature:
BLAST of CK739514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
SUFS_YERPY3.070e-2041.88Cysteine desulfurase OS=Yersinia pseudotuberculosi... [more]
SUFS_YERPP3.070e-2041.88Cysteine desulfurase OS=Yersinia pestis (strain Pe... [more]
SUFS_YERPN3.070e-2041.88Cysteine desulfurase OS=Yersinia pestis bv. Antiqu... [more]
SUFS_YERPG3.070e-2041.88Cysteine desulfurase OS=Yersinia pestis bv. Antiqu... [more]
SUFS_YERPE3.070e-2041.88Cysteine desulfurase OS=Yersinia pestis GN=sufS PE... [more]
SUFS_YERPA3.070e-2041.88Cysteine desulfurase OS=Yersinia pestis bv. Antiqu... [more]
SUFS_YERPS6.839e-2041.88Cysteine desulfurase OS=Yersinia pseudotuberculosi... [more]
SUFS_YERPB6.839e-2041.88Cysteine desulfurase OS=Yersinia pseudotuberculosi... [more]
SUFS_WIGBR1.166e-1938.98Cysteine desulfurase OS=Wigglesworthia glossinidia... [more]
SUFS_PHOLL1.523e-1937.40Cysteine desulfurase OS=Photorhabdus luminescens s... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6352 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE62D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739514 ID=CK739514; Name=CK739514; organism=Citrus sinensis; type=EST; length=352bp
CATCGTTCCCTGGCAGCTTGTAGCTCAAAAGACTGGTGCCAATTTGAAGT
TTTTGAATTTAAATGATGATGAAAGTCCTGATCTTGACAAGTTGAAGGAA
ATGCTTTCAAGGAAAACCAAACTTGTAGTTATTCATCATATCTCTAACAT
GCTTGCTTCTATTCTTCCAATTGAAGAGATTGTACATTGGTCACATGATG
TTGGGGCGAAAGTGCTTGTAGATGCTTGTCAAAGTGTTCCGCACATGGTG
GTTGATGTCCAGGGCCTTGATGCCGATTTTCTTGTTGCCTCTTCTCACAA
GATGTGTGGGCCTACAGGCATTGGATTCTTATTTGGTAAGAGTGATCTCT
TG
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