CK739523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.617e-13 Identity = 43/83 (51.81%), Postives = 50/83 (60.24%), Query Frame = 3 Query: 18 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFA---AFTPK 257 G D YPG FDPLG P+ EL+ KEIKNGRLAM A +G + Q I TG GPI+NL HLA+P FA FTP+ Sbjct: 193 GLDPLYPGEA-FDPLGLAD-DPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTPQ 273
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.617e-13 Identity = 40/77 (51.95%), Postives = 50/77 (64.94%), Query Frame = 3 Query: 21 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 TD YPGG FDPLG PE + EL+ KE+KNGRLAM ++ G + Q I TG GP++NL HLADP + +A T Sbjct: 176 TDPIYPGGS-FDPLGLAD-DPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYAT 250
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.617e-13 Identity = 44/82 (53.66%), Postives = 51/82 (62.20%), Query Frame = 3 Query: 18 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP--GHATVFAA-FTP 254 G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL H+ADP +A FA F P Sbjct: 183 GLDPLYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANNAWAFATNFVP 262
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.030e-13 Identity = 44/82 (53.66%), Postives = 51/82 (62.20%), Query Frame = 3 Query: 18 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP--GHATVFAA-FTP 254 G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL H+ADP +A FA F P Sbjct: 184 GLDKIYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNFVP 263
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.030e-13 Identity = 39/68 (57.35%), Postives = 45/68 (66.18%), Query Frame = 3 Query: 18 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 221 G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL H+ADP Sbjct: 184 GLDKIYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADP 249
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.030e-13 Identity = 40/76 (52.63%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 24 DVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 D+ YPGG FDPLG + PE EL+ KE+KNGRLAM ++ G + Q I TG GPI+NL HLADP + +A T Sbjct: 188 DLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFAT 261
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.030e-13 Identity = 40/76 (52.63%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 24 DVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 D+ YPGG FDPLG + PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HLADP + +A T Sbjct: 187 DLLYPGGS-FDPLGLAT-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFAT 260
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 6.030e-13 Identity = 39/68 (57.35%), Postives = 45/68 (66.18%), Query Frame = 3 Query: 18 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 221 G D YPGG FDPLG P+ EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL HLADP Sbjct: 184 GLDPIYPGGA-FDPLGLAD-DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADP 249
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.030e-13 Identity = 40/76 (52.63%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 24 DVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 D+ YPGG FDPLG + PE EL+ KE+KNGRLAM ++ G + Q I TG GPI+NL HLADP + +A T Sbjct: 188 DLLYPGGS-FDPLGLAT-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFAT 261
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.875e-13 Identity = 43/84 (51.19%), Postives = 50/84 (59.52%), Query Frame = 3 Query: 12 LTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAA---FTP 254 L D YPGG FDPLG P+ EL+ KEIKNGRLAM + +G + Q I TG GP+ NL HLADP FA+ FTP Sbjct: 170 LDDLDTLYPGGP-FDPLGLAD-DPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTP 251 The following BLAST results are available for this feature:
BLAST of CK739523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739523 ID=CK739523; Name=CK739523; organism=Citrus sinensis; type=EST; length=402bpback to top |