CK739523
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.993e-12 Identity = 37/63 (58.73%), Postives = 43/63 (68.25%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 221 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP++NL HLADP Sbjct: 190 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 250
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.993e-12 Identity = 39/68 (57.35%), Postives = 44/68 (64.71%), Query Frame = 3 Query: 18 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 221 G D PGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL HLADP Sbjct: 185 GLDPLLPGGA-FDPLGLAD-DPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADP 250
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.993e-12 Identity = 39/73 (53.42%), Postives = 46/73 (63.01%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 YPGG FDPLG PE EL KEIKNGRLAM ++ G + Q I TG GP++NL HLADP + +A T Sbjct: 190 YPGGS-FDPLGLAD-DPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFAT 260
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.993e-12 Identity = 42/82 (51.22%), Postives = 50/82 (60.98%), Query Frame = 3 Query: 18 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP--GHATVFAA-FTP 254 G D YPGG FDPLG P+ EL+ KE+KNGRLAM ++ G + Q I TG GPI NL H+ADP +A FA F P Sbjct: 184 GLDPLYPGGA-FDPLGLAD-DPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVP 263
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.908e-12 Identity = 39/73 (53.42%), Postives = 47/73 (64.38%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 Y GG FDPLG G PE+ EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL HL DP + +A T Sbjct: 188 YLGGS-FDPLGLGD-DPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNNNAWAYAT 258
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.908e-12 Identity = 39/77 (50.65%), Postives = 49/77 (63.64%), Query Frame = 3 Query: 21 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 TD YPGG FDPLG P+ +++ KEIKNGRLAM ++ G + Q I TG GPI+NL HLADP + +A T Sbjct: 198 TDPIYPGGN-FDPLGLAD-DPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYAT 272
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.908e-12 Identity = 38/68 (55.88%), Postives = 44/68 (64.71%), Query Frame = 3 Query: 18 GTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 221 G D YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GPI+NL H+ DP Sbjct: 184 GLDKIYPGGA-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDP 249
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.105e-12 Identity = 36/63 (57.14%), Postives = 43/63 (68.25%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 221 YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q + TG GP++NL HLADP Sbjct: 190 YPGGS-FDPLGLAE-DPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADP 250
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.105e-12 Identity = 39/77 (50.65%), Postives = 48/77 (62.34%), Query Frame = 3 Query: 21 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADPGHATVFAAFT 251 TD YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + Q I TG GP++NL HLA P + +A T Sbjct: 183 TDPIYPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNNAWAYAT 257
BLAST of CK739523 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.105e-12 Identity = 36/63 (57.14%), Postives = 43/63 (68.25%), Query Frame = 3 Query: 33 YPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLIAHLADP 221 YPGG FDPLG PE EL+ KE+KNGRLAM ++ G + Q I TG GP++NL HLADP Sbjct: 193 YPGGS-FDPLGLAD-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADP 253 The following BLAST results are available for this feature:
BLAST of CK739523 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739523 ID=CK739523; Name=CK739523; organism=Citrus sinensis; type=EST; length=402bpback to top |