CK739543
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739543 vs. ExPASy Swiss-Prot
Match: GCSP_BORA1 (Glycine dehydrogenase [decarboxylating] OS=Bordetella avium (strain 197N) GN=gcvP PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.243e-17 Identity = 36/71 (50.70%), Postives = 47/71 (66.20%), Query Frame = 1 Query: 1 IENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 213 +E G+ D +NVLK APH +L+ + W Y R+ AAYP + LR K+WP RVDN YGDRNL+C+ LP Sbjct: 880 VERGERDREDNVLKNAPHTAQMLLAEEWHHAYPRQQAAYPLASLRDGKYWPPVARVDNAYGDRNLVCSCLP 950
BLAST of CK739543 vs. ExPASy Swiss-Prot
Match: GCSP_RALME (Glycine dehydrogenase [decarboxylating] OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=gcvP PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.577e-16 Identity = 36/71 (50.70%), Postives = 48/71 (67.61%), Query Frame = 1 Query: 1 IENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 213 +E+G D +N LK APH ++++ D W Y+RE AAYP + LR K+WP GR DNVYGDRNL C+ +P Sbjct: 897 VEDGSFDREDNPLKHAPHTAAVVVSDKWNHKYTREEAAYPVASLRTQKYWPPVGRADNVYGDRNLFCSCVP 967
BLAST of CK739543 vs. ExPASy Swiss-Prot
Match: GCSP_RALEJ (Glycine dehydrogenase [decarboxylating] OS=Ralstonia eutropha (strain JMP134) GN=gcvP PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.577e-16 Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 1 Query: 1 IENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 213 +E+G D +N LK APH +++ + WT+ Y+RE AAYP + LR K+WP GR DNVYGDRNL C+ +P Sbjct: 899 VEDGSFDRDDNPLKHAPHTAAVVTANEWTRKYTREEAAYPVASLRTQKYWPPVGRADNVYGDRNLFCSCVP 969
BLAST of CK739543 vs. ExPASy Swiss-Prot
Match: GCSP_DICDI (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Dictyostelium discoideum GN=gcvP PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.577e-16 Identity = 36/71 (50.70%), Postives = 47/71 (66.20%), Query Frame = 1 Query: 1 IENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 213 IE GKAD NNVL +PH +++ D W PYSR AA+P +KFWP GR+DNV+GD+NL+C+ P Sbjct: 919 IETGKADRKNNVLVNSPHTEKVIVADNWNYPYSRSKAAFPTPATVASKFWPTVGRIDNVHGDKNLVCSCPP 989
BLAST of CK739543 vs. ExPASy Swiss-Prot
Match: GCSP_RALPJ (Glycine dehydrogenase [decarboxylating] OS=Ralstonia pickettii (strain 12J) GN=gcvP PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.689e-16 Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 1 Query: 7 NGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 213 +G+ D +N LK APH +++M D W+ Y+RE AAYP + LR K+WP GR DNVYGDRNL C +P Sbjct: 904 SGEFDREDNPLKHAPHTAAVVMADDWSHKYTREQAAYPVASLRARKYWPPVGRADNVYGDRNLFCACVP 972
BLAST of CK739543 vs. ExPASy Swiss-Prot
Match: GCSP_BORPA (Glycine dehydrogenase [decarboxylating] OS=Bordetella parapertussis GN=gcvP PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.689e-16 Identity = 36/71 (50.70%), Postives = 47/71 (66.20%), Query Frame = 1 Query: 1 IENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 213 IE+G+ D +NVL+ APH +L+ + W Y R+ AAYP + LR K+WP RVDN YGDRNL+C LP Sbjct: 879 IESGERDRDDNVLRNAPHTAQMLLAEEWHHDYPRQQAAYPVASLRENKYWPPVARVDNAYGDRNLVCACLP 949
BLAST of CK739543 vs. ExPASy Swiss-Prot
Match: GCSP_BORBR (Glycine dehydrogenase [decarboxylating] OS=Bordetella bronchiseptica GN=gcvP PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 2.689e-16 Identity = 36/71 (50.70%), Postives = 47/71 (66.20%), Query Frame = 1 Query: 1 IENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 213 IE+G+ D +NVL+ APH +L+ + W Y R+ AAYP + LR K+WP RVDN YGDRNL+C LP Sbjct: 879 IESGERDRDDNVLRNAPHTAQMLLAEEWHHDYPRQQAAYPVASLRENKYWPPVARVDNAYGDRNLVCACLP 949
BLAST of CK739543 vs. ExPASy Swiss-Prot
Match: GCSP_BORPE (Glycine dehydrogenase [decarboxylating] OS=Bordetella pertussis GN=gcvP PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.512e-16 Identity = 35/71 (49.30%), Postives = 47/71 (66.20%), Query Frame = 1 Query: 1 IENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICTLLP 213 +E+G+ D +NVL+ APH +L+ + W Y R+ AAYP + LR K+WP RVDN YGDRNL+C LP Sbjct: 879 VESGERDRDDNVLRNAPHTAQMLLAEEWHHDYPRQQAAYPVASLRENKYWPPVARVDNAYGDRNLVCACLP 949
BLAST of CK739543 vs. ExPASy Swiss-Prot
Match: GCSP1_PSEPF (Glycine dehydrogenase [decarboxylating] 1 OS=Pseudomonas fluorescens (strain Pf0-1) GN=gcvP1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.587e-16 Identity = 38/67 (56.72%), Postives = 47/67 (70.15%), Query Frame = 1 Query: 1 IENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLIC 201 +ENG D +N LK APH + L+G+ WT PYSRE A YP + L K+WP GRVDNV+GDRNL+C Sbjct: 876 VENGTLDKDDNPLKNAPHTAAELVGE-WTHPYSREQAVYPVASLIEGKYWPPVGRVDNVFGDRNLVC 941
BLAST of CK739543 vs. ExPASy Swiss-Prot
Match: GCSP_SYNR3 (Glycine dehydrogenase [decarboxylating] OS=Synechococcus sp. (strain RCC307) GN=gcvP PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.824e-16 Identity = 37/68 (54.41%), Postives = 44/68 (64.71%), Query Frame = 1 Query: 1 IENGKADIHNNVLKGAPHPPSLLMGDTWTKPYSREYAAYPASWLRFAKFWPATGRVDNVYGDRNLICT 204 IE G D +N L+ APH + + D W +PYSRE AAYP LR K WPA R+DN +GDRNLICT Sbjct: 878 IEAGLCDRDDNPLRRAPHTLAAVTADVWERPYSREQAAYPVQGLRSNKLWPAVSRIDNAFGDRNLICT 945 The following BLAST results are available for this feature:
BLAST of CK739543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 181
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739543 ID=CK739543; Name=CK739543; organism=Citrus sinensis; type=EST; length=352bpback to top |