CK739544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739544 vs. ExPASy Swiss-Prot
Match: TBA1_NAEGR (Tubulin alpha-1/2/3 chain OS=Naegleria gruberi GN=TBA1 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 2.950e-55 Identity = 101/116 (87.07%), Postives = 108/116 (93.10%), Query Frame = 3 Query: 3 TIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVD-DDNEGED 347 TIKTKR +QFVDW PTGFKCGINYQPPTVVPGGDLA+VQRAVCMISN+TA+AEVFSRIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG + + D EGED Sbjct: 334 TIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGTESQEGDGEEGED 449
BLAST of CK739544 vs. ExPASy Swiss-Prot
Match: TBA13_NAEGR (Tubulin alpha-13 chain OS=Naegleria gruberi GN=TUBA13 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 2.950e-55 Identity = 101/116 (87.07%), Postives = 108/116 (93.10%), Query Frame = 3 Query: 3 TIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVD-DDNEGED 347 TIKTKR +QFVDW PTGFKCGINYQPPTVVPGGDLA+VQRAVCMISN+TA+AEVFSRIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG + + D EGED Sbjct: 334 TIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGTESQEGDGEEGED 449
BLAST of CK739544 vs. ExPASy Swiss-Prot
Match: TBAD_PHYPO (Tubulin alpha-1A chain OS=Physarum polycephalum GN=ALTA PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 3.853e-55 Identity = 100/115 (86.96%), Postives = 107/115 (93.04%), Query Frame = 3 Query: 6 IKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVD--DDNEGE 344 IKTKR +QFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM+SN TA+AEVFSRIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGA+ + D EGE Sbjct: 335 IKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESSEAGGDEEGE 449
BLAST of CK739544 vs. ExPASy Swiss-Prot
Match: TBA8_RAT (Tubulin alpha-8 chain OS=Rattus norvegicus GN=Tuba8 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 3.853e-55 Identity = 95/115 (82.61%), Postives = 108/115 (93.91%), Query Frame = 3 Query: 6 IKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDDNEGEDY 350 IKTKR +QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SN TA+AE ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG D +++NEGE++ Sbjct: 335 IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGTDSFEEENEGEEF 449
BLAST of CK739544 vs. ExPASy Swiss-Prot
Match: TBA8_MOUSE (Tubulin alpha-8 chain OS=Mus musculus GN=Tuba8 PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 3.853e-55 Identity = 95/115 (82.61%), Postives = 108/115 (93.91%), Query Frame = 3 Query: 6 IKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDDNEGEDY 350 IKTKR +QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SN TA+AE ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG D +++NEGE++ Sbjct: 335 IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGTDSFEEENEGEEF 449
BLAST of CK739544 vs. ExPASy Swiss-Prot
Match: TBA8_HUMAN (Tubulin alpha-8 chain OS=Homo sapiens GN=TUBA8 PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 3.853e-55 Identity = 95/115 (82.61%), Postives = 108/115 (93.91%), Query Frame = 3 Query: 6 IKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDDNEGEDY 350 IKTKR +QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SN TA+AE ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG D +++NEGE++ Sbjct: 335 IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGTDSFEEENEGEEF 449
BLAST of CK739544 vs. ExPASy Swiss-Prot
Match: TBA8_BOVIN (Tubulin alpha-8 chain OS=Bos taurus GN=TUBA8 PE=2 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 3.853e-55 Identity = 95/115 (82.61%), Postives = 108/115 (93.91%), Query Frame = 3 Query: 6 IKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDDNEGEDY 350 IKTKR +QFVDWCPTGFK GINYQPPTVVPGGDLA+VQRAVCM+SN TA+AE ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG D +++NEGE++ Sbjct: 335 IKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGTDSFEEENEGEEF 449
BLAST of CK739544 vs. ExPASy Swiss-Prot
Match: TBA_OXYGR (Tubulin alpha chain OS=Oxytricha granulifera PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 5.032e-55 Identity = 98/114 (85.96%), Postives = 106/114 (92.98%), Query Frame = 3 Query: 3 TIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDDNEGE 344 TIKTKR +QFVDWCPTGFKCGINYQPPTVVPGGDLA+V RAVCMISN+TA+AEVFSRIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG + + + E E Sbjct: 334 TIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIETAEGEGEEE 447
BLAST of CK739544 vs. ExPASy Swiss-Prot
Match: TBA_AVESA (Tubulin alpha chain OS=Avena sativa GN=TUBA PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 5.032e-55 Identity = 100/110 (90.91%), Postives = 105/110 (95.45%), Query Frame = 3 Query: 3 TIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDD 332 TIKTKR VQFVD CPTGFKCGINYQPP+VVPGGDLA+VQRAVCMISNNTAVAEVFSRIDHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLA LEK YEEVGA+G DD+ Sbjct: 334 TIKTKRTVQFVDXCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAXLEKXYEEVGAEGADDE 443
BLAST of CK739544 vs. ExPASy Swiss-Prot
Match: TBA_TRYCR (Tubulin alpha chain OS=Trypanosoma cruzi PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 8.583e-55 Identity = 98/112 (87.50%), Postives = 106/112 (94.64%), Query Frame = 3 Query: 3 TIKTKRAVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADGVDDDNE 338 TIKTKR +QFVDW PTGFKCGINYQPPTVVPGGDLA+VQRAVCMI+N+TA+AEVF+RIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGA+ D + E Sbjct: 334 TIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIANSTAIAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESADMEGE 445 The following BLAST results are available for this feature:
BLAST of CK739544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 375
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739544 ID=CK739544; Name=CK739544; organism=Citrus sinensis; type=EST; length=350bpback to top |