CK739559

Overview
NameCK739559
Unique NameCK739559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.293e-32
Identity = 78/169 (46.15%), Postives = 105/169 (62.13%), Query Frame = 1
Query:   94 FSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLEN--HLFRKATVPLSWATRMMIAFGAAKGLAFLHNAERP-VIYRDFKTSNILLDSDYTAKLSDFGLAK 591
            F+L +LE  T  F    +LGEGG+G VY+G +     V +K      K+LN  G Q  +E+  EV  +G +RH NLV+L+GYC E  HR+LVYE++  G+LE   H   +    L+W  RM I  G A+ LA+LH A  P V++RD K SNIL+D ++ AKLSDFGLAK
Sbjct:  171 FTLRDLELATNRFAPVNVLGEGGYGVVYRGKLVNGTEVAVK------KLLNNLG-QAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNSGNLEQWLHGAMRQHGNLTWEARMKIITGTAQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAK 332          
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.206e-32
Identity = 75/170 (44.12%), Postives = 104/170 (61.18%), Query Frame = 1
Query:   94 FSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK---ATVPLSWATRMMIAFGAAKGLAFLHNAER-PVIYRDFKTSNILLDSDYTAKLSDFGLAK 591
            F+L +++  T +F     +GEGGFG+VYKG + E   +       AVK L+ +  QG+RE++ E+  +  L+HPNLVKL G C E +  +LVYE++    L   LF K   + + L W+TR  I  G AKGL FLH   R  +++RD K SN+LLD D  AK+SDFGLAK
Sbjct:  666 FTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLI-------AVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAK 828          
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.206e-32
Identity = 78/169 (46.15%), Postives = 110/169 (65.09%), Query Frame = 1
Query:   94 FSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVP--LSWATRMMIAFGAAKGLAFLHN-AERPVIYRDFKTSNILLDSDYTAKLSDFGLAK 591
            F+L  +E  T+ +++  ++GEGGFG+VY+G +D+   V       AVKV +    QG RE+  E+N L  ++H NLV L+GYC E D ++LVY FM  GSL + L+ +A+    L W TR+ IA GAA+GLA+LH    R VI+RD K+SNILLD    AK++DFG +K
Sbjct:  586 FTLEYIEQATEQYKT--LIGEGGFGSVYRGTLDDGQEV-------AVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSK 745          
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.206e-32
Identity = 70/160 (43.75%), Postives = 104/160 (65.00%), Query Frame = 1
Query:  121 TKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKATVPLSWATRMMIAFGAAKGLAFLHNAE-RPVIYRDFKTSNILLDSDYTAKLSDFGLAKAG 597
            T +F     +G GGFG VYKG +++  +V       AVK  N +  QG  E+ TE+  L Q RH +LV LIGYC E++  +L+YE+M  G++++HL+      L+W  R+ I  GAA+GL +LH  + +PVI+RD K++NILLD ++ AK++DFGL+K G
Sbjct:  482 TNNFDESRNIGVGGFGKVYKGELNDGTKV-------AVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYGSGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKTG 634          
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.419e-32
Identity = 79/170 (46.47%), Postives = 106/170 (62.35%), Query Frame = 1
Query:   94 FSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLF--RKATVPLSWATRMMIAFGAAKGLAFLHNAERPV--IYRDFKTSNILLDSDYTAKLSDFGLAK 591
            F+L +++  T  F     +GEGGFG V+KG + +  RV      VAVK L+ +  QG+RE+L E+  +  L+HPNLVKL G+C E    LL YE+M   SL + LF  +   +P+ W TR  I  G AKGLAFLH  E P+  ++RD K +NILLD D T K+SDFGLA+
Sbjct:  669 FTLRQIKFATDDFNPTNKIGEGGFGAVFKGVLADG-RV------VAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHE-ESPLKFVHRDIKATNILLDKDLTPKISDFGLAR 830          
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 8.383e-32
Identity = 78/191 (40.84%), Postives = 115/191 (60.21%), Query Frame = 1
Query:   28 PSTPRNLEDSRKNAVLYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLHNAERP-VIYRDFKTSNILLDSDYTAKLSDFGLAKA 594
            PS+ R L  SR N  L       +  E+  +T +F  + ++GEGGFG VY GY++++ +V       AVKVL+    QG++E+  EV  L ++ H NLV L+GYC E  H  L+YE+M  G L++HL  K     L W  R+ IA   A GL +LH+  +P +++RD K+ NILLD  + AKL+DFGL+++
Sbjct:  541 PSSIRALHPSRANLSLENKKRRITYSEILLMTNNF--ERVIGEGGFGVVYHGYLNDSEQV-------AVKVLSPSSSQGYKEFKAEVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHLSGKHGDCVLKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLSRS 722          
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 8.383e-32
Identity = 73/170 (42.94%), Postives = 111/170 (65.29%), Query Frame = 1
Query:   91 AFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLF-RKATVPLSWATRMMIAFGAAKGLAFLH-NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA 594
            +++  E+  IT +F     LGEGGFG VY G +++N +V       AVKVL++   QG++++  EV+ L ++ H NLV L+GYC E  H +L+YE+M  G+L+ HL    +  PLSW  R+ IA   A+GL +LH   + P+I+RD K+ NILLD+++ AKL DFGL+++
Sbjct:  580 SYTYEEVAVITNNFERP--LGEGGFGVVYHGNVNDNEQV-------AVKVLSESSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHLSGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRS 740          
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.095e-31
Identity = 74/169 (43.79%), Postives = 110/169 (65.09%), Query Frame = 1
Query:   94 FSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK-ATVPLSWATRMMIAFGAAKGLAFLH-NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA 594
            F+  E+  +TK+F+   +LG+GGFG VY G +  + +V       AVKVL++   QG +E+  EV+ L ++ H NLV L+GYCCE D+  LVYEF+  G L+ HL  K     ++W+ R+ IA  AA GL +LH     P+++RD KT+NILLD ++ AKL+DFGL+++
Sbjct:  554 FTYSEVVQVTKNFQR--VLGKGGFGMVYHGTVKGSEQV-------AVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRS 713          
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.430e-31
Identity = 74/172 (43.02%), Postives = 101/172 (58.72%), Query Frame = 1
Query:   85 VIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLF--RKATVPLSWATRMMIAFGAAKGLAFLHNAER-PVIYRDFKTSNILLDSDYTAKLSDFGLAK 591
            + +FSL +++  T +F S   +GEGGFG VYKG + +   + +K L    K       QG+RE+L E+  +  L HPNLVKL G C E    LLVYEF+   SL   LF  ++  + L W TR  I  G A+GLA+LH   R  +++RD K +N+LLD     K+SDFGLAK
Sbjct:  609 IASFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTGSK-------QGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKISDFGLAK 773          
BLAST of CK739559 vs. ExPASy Swiss-Prot
Match: Y2289_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.868e-31
Identity = 70/176 (39.77%), Postives = 113/176 (64.20%), Query Frame = 1
Query:   73 LYTHVIAFSLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKEGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLF-RKATVPLSWATRMMIAFGAAKGLAFLH-NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKA 594
            ++T    F+  E+E +T +F  + +LGEGGFG VY G ++        + P+AVK+L++  +QG++E+  EV  L ++ H NLV L+GYC E+ +  L+YE+   G L+ HL   +   PL W++R+ I    A+GL +LH   + P+++RD KT+NILLD  + AKL+DFGL+++
Sbjct:  556 IFTQTKRFTYSEVEALTDNF--ERVLGEGGFGVVYHGILNG-------TQPIAVKLLSQSSVQGYKEFKAEVELLLRVHHVNLVSLVGYCDEESNLALLYEYAPNGDLKQHLSGERGGSPLKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRS 722          
The following BLAST results are available for this feature:
BLAST of CK739559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y2296_ARATH1.293e-3246.15Probable receptor-like protein kinase At2g42960 OS... [more]
Y1765_ARATH2.206e-3244.12Probable LRR receptor-like serine/threonine-protei... [more]
NORK_MEDTR2.206e-3246.15Nodulation receptor kinase OS=Medicago truncatula ... [more]
HERK_ARATH2.206e-3243.75Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
RKF1_ARATH6.419e-3246.47Probable LRR receptor-like serine/threonine-protei... [more]
Y5169_ARATH8.383e-3240.84Probable LRR receptor-like serine/threonine-protei... [more]
Y4245_ARATH8.383e-3242.94Probable LRR receptor-like serine/threonine-protei... [more]
RLK7_ARATH1.095e-3143.79Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
Y1534_ARATH1.430e-3143.02Probable LRR receptor-like serine/threonine-protei... [more]
Y2289_ARATH1.868e-3139.77Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5946 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE57A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739559 ID=CK739559; Name=CK739559; organism=Citrus sinensis; type=EST; length=598bp
AACCGTTCGATATCAGATCTGAGCGATCCTTCCACTCCGCGTAATTTAGA
GGACTCTAGGAAGAATGCTGTGCTCTATACTCACGTAATTGCCTTCTCTT
TGTTCGAACTCGAGACCATTACGAAGAGCTTTCGCTCTGATTATATTCTT
GGAGAAGGCGGTTTTGGCACCGTCTATAAAGGTTACATTGATGAGAATGT
GAGGGTCGGCCTCAAATCTTTACCCGTTGCCGTCAAGGTCCTCAATAAGG
AAGGCCTTCAGGGACACCGTGAATGGCTTACGGAGGTCAACTTCCTAGGT
CAACTTAGGCATCCGAATCTGGTTAAATTGATTGGGTATTGTTGCGAGGA
CGATCACAGGTTACTTGTGTATGAGTTCATGTTCAGAGGAAGCCTTGAGA
ATCACTTGTTTCGAAAGGCAACTGTCCCACTATCATGGGCCACAAGAATG
ATGATTGCTTTTGGAGCTGCCAAAGGGCTTGCTTTCCTTCACAATGCTGA
AAGGCCAGTTATATATCGGGACTTCAAAACCTCTAATATCTTGTTGGACT
CAGATTATACGGCCAAGCTTTCTGATTTTGGTCTTGCAAAAGCTGGAC
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