CK739562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739562 vs. ExPASy Swiss-Prot
Match: RS4_METST (30S ribosomal protein S4P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps4p PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.792e-13 Identity = 43/116 (37.07%), Postives = 67/116 (57.76%), Query Frame = 3 Query: 30 KTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHA 377 K + P P+ +R+ E RL +YGL+ K+E+W+ + + R R AR +L +D R + + LL + R GF+ + KL+ VL L VE+ L RRLQ+LVFK G++ + A Sbjct: 9 KQYDTPSHPWNADRIKEENRLANKYGLKNKKEIWKAESRVKRYRRDARIILGMD--IDERADKEKELLDHLVRAGFISPNA-KLEEVLDLNVEDILRRRLQSLVFKRGLSHTAKEA 121
BLAST of CK739562 vs. ExPASy Swiss-Prot
Match: RS4_METS3 (30S ribosomal protein S4P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps4p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.087e-12 Identity = 44/116 (37.93%), Postives = 64/116 (55.17%), Query Frame = 3 Query: 18 RNYGKTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKS 365 R K + P P+ ER+ E +L+ +YGL+ K+E+W+ + R AR LL D + E LL + R G L E L+ VL LTVE+ L RRLQT+V+K G+A++ Sbjct: 5 RKSRKKYNTPPHPWNAERIKNENKLMTKYGLKNKKEIWKADTLVRRYSREARYLLGFDMDQMQD--EKLELLGHLARTGVLPEGA-ALEEVLNLTVEDILRRRLQTIVYKKGLART 117
BLAST of CK739562 vs. ExPASy Swiss-Prot
Match: RS4_NATPD (30S ribosomal protein S4P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps4p PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.878e-12 Identity = 42/117 (35.90%), Postives = 64/117 (54.70%), Query Frame = 3 Query: 30 KTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFE-GEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHA 377 K ++ P P++ ER+ E L+ YGL K ELWR Q L R AR L+ + + E G L R+ R G L++ ++ LD +L+L V + LERRLQT+ ++ G+ + A Sbjct: 8 KFYETPNHPFQGERIAEEGDLLSRYGLVNKEELWRAQSELRDYRREARRLIGEAQGDTVAAAEAGSEFLARLKRIGVLDD-EDSLDDILSLDVTDILERRLQTVAYRKGLGNTPQQA 123 The following BLAST results are available for this feature:
BLAST of CK739562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739562 ID=CK739562; Name=CK739562; organism=Citrus sinensis; type=EST; length=377bpback to top |