CK739586

Overview
NameCK739586
Unique NameCK739586
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length393
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: AX22B_PHAAU (Auxin-induced protein 22B OS=Phaseolus aureus GN=AUX22B PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.028e-12
Identity = 49/119 (41.18%), Postives = 66/119 (55.46%), Query Frame = 3
Query:    9 KAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKGSMDGAPYLRKVDLRTYTNYGETIFCSGEDVQLLYNWSMWIT*STREGNAE*EQVEGSFAWIRICAYI*GQDGDWMLVG 365
            KA++VGWPPIRS+RKNS+        E DG      +F+K SMDGAPYLRKVDL+ Y  Y E +    + ++ ++  ++    S REG       +GS            +DGDWMLVG
Sbjct:   75 KAKIVGWPPIRSYRKNSV-----QEGEGDG------IFVKVSMDGAPYLRKVDLKVYGGYPELL----KALETMFKLAIG-EYSEREG------YKGS----EYAPTYEDKDGDWMLVG 167          
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: IAA7_ORYSJ (Auxin-responsive protein IAA7 OS=Oryza sativa subsp. japonica GN=IAA7 PE=2 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 4.347e-12
Identity = 31/64 (48.44%), Postives = 42/64 (65.62%), Query Frame = 3
Query:   18 VVGWPPIRSFRKNSLATTSKNNDEV-DGKPG------PGALFIKGSMDGAPYLRKVDLRTYTNY 188
            VVGWPP+R+FR+N LAT+SK + E+ +GK          A FIK +MDG P  RK+DL  + +Y
Sbjct:  139 VVGWPPVRTFRRN-LATSSKASLELQNGKKAAKAEEIKRAPFIKINMDGVPIGRKIDLNAFDSY 201          

HSP 2 Score: 38.1206 bits (87), Expect = 4.347e-12
Identity = 25/68 (36.76%), Postives = 34/68 (50.00%), Query Frame = 1
Query:  193 KLSSALEKMFSCFTIGQCGSHEAPGREMLSES-KLKDLLHGS-EYVLTYEDRMVTGCSLGDVPWEMFI 390
            KLS A++K+F      Q     A  ++   E   +  LL G+ EY L YED       +GDVPW MF+
Sbjct:  203 KLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLDGTGEYTLVYEDYEGDKVLVGDVPWGMFV 270          
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: AX22C_PHAAU (Auxin-induced protein 22C OS=Phaseolus aureus GN=AUX22C PE=2 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 5.746e-12
Identity = 27/65 (41.54%), Postives = 36/65 (55.38%), Query Frame = 3
Query:    9 KAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKGSMDGAPYLRKVDLRTYTNYGETIF 203
            K QVVGWPP+ S+RK +     K             L++K SMDGAP+LRK+DL  +  Y +  F
Sbjct:   57 KNQVVGWPPVCSYRKKNTVNEPK-------------LYVKVSMDGAPFLRKIDLAMHKGYSDLAF 108          

HSP 2 Score: 35.4242 bits (80), Expect = 5.746e-12
Identity = 23/64 (35.94%), Postives = 31/64 (48.44%), Query Frame = 1
Query:  196 LSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDRMVTGCSLGDVPWEMF 387
            L+ AL+K F C+ I +                LKD    +E+V  YED+      +GDVPWEMF
Sbjct:  106 LAFALDKFFGCYGICEA---------------LKDA-ENAEHVPIYEDKDGDWMLVGDVPWEMF 153          
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: IAA24_ORYSJ (Auxin-responsive protein IAA24 OS=Oryza sativa subsp. japonica GN=IAA24 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 6.746e-12
Identity = 54/128 (42.19%), Postives = 69/128 (53.91%), Query Frame = 3
Query:    6 AKAQVVGWPPIRSFRKNSL-------ATTSKNNDEVDGKPGPGA-LFIKGSMDGAPYLRKVDLRTYTNYGETIFCSGEDVQLLYNWSMWIT*STREGNAE*EQVEGSFAWIRICAYI*GQDGDWMLVG 365
            AKAQVVGWPP+R++R+N+        A T K  DE   +   G  L++K SMDGAPYLRKVDL+    Y E      E + LL+      T S  +G +     +G FA     AY   +DGD MLVG
Sbjct:   85 AKAQVVGWPPVRAYRRNTFHQAAAAAAATKKGGDEKQKQQQQGGGLYVKVSMDGAPYLRKVDLKMCKGYREL----REALDLLFTKCFSATAS--DGCS-----DGQFA----IAYE-DKDGDLMLVG 196          
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: IAA15_ORYSJ (Auxin-responsive protein IAA15 OS=Oryza sativa subsp. japonica GN=IAA15 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 8.810e-12
Identity = 44/119 (36.97%), Postives = 66/119 (55.46%), Query Frame = 3
Query:    9 KAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKGSMDGAPYLRKVDLRTYTNYGETIFCSGEDVQLLYNWSMWIT*STREGNAE*EQVEGSFAWIRICAYI*GQDGDWMLVG 365
            KA+VVGWPP+R+FRKN+LA  +  +          A F+K ++DGAPYLRKVDL  Y  Y + +    +  +   ++++      + GN E + V+       +  Y   +DGDWMLVG
Sbjct:   79 KARVVGWPPVRAFRKNALAALAAASSS-------KAKFVKVAVDGAPYLRKVDLEAYRGYDQLLAALQD--KFFSHFTI-----RKLGNEEMKLVDAVSGNEYVPTYE-DKDGDWMLVG 182          
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: IAA6_ORYSJ (Auxin-responsive protein IAA6 OS=Oryza sativa subsp. japonica GN=IAA6 PE=2 SV=1)

HSP 1 Score: 49.6766 bits (117), Expect = 1.231e-11
Identity = 30/73 (41.10%), Postives = 39/73 (53.42%), Query Frame = 3
Query:    6 AKAQVVGWPPIRSFRKNSLATTSK------NNDEVDG------KPGPGALFIKGSMDGAPYLRKVDLRTYTNY 188
            A A VVGWPPIRSFR+N  +++S        ND  +       K  P    +K +MDG P  RK+DL  Y +Y
Sbjct:  172 AAAPVVGWPPIRSFRRNLASSSSSKHSPEPQNDNANAKVTLTCKKNP---LVKINMDGIPIGRKIDLAAYNSY 241          

HSP 2 Score: 38.891 bits (89), Expect = 1.231e-11
Identity = 25/67 (37.31%), Postives = 37/67 (55.22%), Query Frame = 1
Query:  196 LSSALEKMFSCFTIGQCGSHEAPGREMLSESKL-KDLLHGS-EYVLTYEDRMVTGCSLGDVPWEMFI 390
            LSSA++++F  F   Q     A   +  ++ K+   LL GS EY L YED       +GDVPW++F+
Sbjct:  244 LSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKIFYQLLDGSGEYTLVYEDSEGDRMLVGDVPWKVFV 310          
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: IAA11_ORYSJ (Auxin-responsive protein IAA11 OS=Oryza sativa subsp. japonica GN=IAA11 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.963e-11
Identity = 52/133 (39.10%), Postives = 62/133 (46.62%), Query Frame = 3
Query:    3 AAKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKGSMDGAPYLRKVDLRTYTNYGE------------TIFCSGEDVQLLYNWSMWIT*STREGNAE*EQVEGSFAWIRICAYI*GQDGDWMLVG 365
            A KAQVVGWPP+RSFRKN LA   K            A  +K SMDGAPYLRK+D+  Y +Y E            TI   G   QL            +E N   + +E       +  Y   +DGDWMLVG
Sbjct:   96 APKAQVVGWPPVRSFRKNVLAEKCK-----------AAALVKVSMDGAPYLRKIDVAMYKSYPELSMAFQNMFTSFTIGKCGSHQQL------------KESNKLRDDLE------YVPTYE-DKDGDWMLVG 198          
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: IAA11_ARATH (Auxin-responsive protein IAA11 OS=Arabidopsis thaliana GN=IAA11 PE=2 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 2.723e-11
Identity = 27/77 (35.06%), Postives = 38/77 (49.35%), Query Frame = 3
Query:    3 AAKAQVVGWPPIRSFRKNSLATTSK---------------NNDEVDGKPGPGALFIKGSMDGAPYLRKVDLRTYTNY 188
            A   QVVGWPPIR++R NS+   +K               N +  D      ++F+K +MDG P  RK+DL  +  Y
Sbjct:   84 ATSGQVVGWPPIRTYRMNSMVNQAKASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCY 160          

HSP 2 Score: 36.1946 bits (82), Expect = 2.723e-11
Identity = 28/66 (42.42%), Postives = 36/66 (54.55%), Query Frame = 1
Query:  196 LSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSE-YVLTYEDRMVTGCSLGDVPWEMFI 390
            LS+ LE+MF    +G   + E  G     E+ +K L  GS   VLTYED+      +GDVPW MFI
Sbjct:  163 LSNTLEEMFLKPKLGS-RTLETDGH---METPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMFI 224          
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: IAA1_ARATH (Auxin-responsive protein IAA1 OS=Arabidopsis thaliana GN=IAA1 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.348e-11
Identity = 47/120 (39.17%), Postives = 65/120 (54.17%), Query Frame = 3
Query:    6 AKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKGSMDGAPYLRKVDLRTYTNYGETIFCSGEDVQLLYNWSMWIT*STREGNAE*EQVEGSFAWIRICAYI*GQDGDWMLVG 365
            AK Q+VGWPP+RS RKN+      NN  V         ++K SMDGAPYLRK+DL+ Y NY E +    + ++ ++ +++    S REG       +GS            +DGDWMLVG
Sbjct:   52 AKTQIVGWPPVRSNRKNN------NNKNVS--------YVKVSMDGAPYLRKIDLKMYKNYPELL----KALENMFKFTVG-EYSEREG------YKGS----GFVPTYEDKDGDWMLVG 142          
BLAST of CK739586 vs. ExPASy Swiss-Prot
Match: IAA6_ARATH (Auxin-responsive protein IAA6 OS=Arabidopsis thaliana GN=IAA6 PE=1 SV=2)

HSP 1 Score: 52.7582 bits (125), Expect = 3.575e-11
Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 3
Query:    9 KAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKGSMDGAPYLRKVDLRTYTNY 188
            K+Q VGWPP+ S+R+       KNN+E     G    ++K SMDG PY+RK+DL +  +Y
Sbjct:   68 KSQAVGWPPVCSYRRK------KNNEEASKAIG----YVKVSMDGVPYMRKIDLGSSNSY 117          

HSP 2 Score: 34.2686 bits (77), Expect = 3.575e-11
Identity = 21/64 (32.81%), Postives = 29/64 (45.31%), Query Frame = 1
Query:  196 LSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDRMVTGCSLGDVPWEMF 387
            L + LE +F C  IG           +  E K        EY++ YED+      +GDVPW+MF
Sbjct:  120 LVTVLENLFGCLGIG-----------VAKEGKK------CEYIIIYEDKDRDWMLVGDVPWQMF 166          
The following BLAST results are available for this feature:
BLAST of CK739586 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
AX22B_PHAAU3.028e-1241.18Auxin-induced protein 22B OS=Phaseolus aureus GN=A... [more]
IAA7_ORYSJ4.347e-1248.44Auxin-responsive protein IAA7 OS=Oryza sativa subs... [more]
AX22C_PHAAU5.746e-1241.54Auxin-induced protein 22C OS=Phaseolus aureus GN=A... [more]
IAA24_ORYSJ6.746e-1242.19Auxin-responsive protein IAA24 OS=Oryza sativa sub... [more]
IAA15_ORYSJ8.810e-1236.97Auxin-responsive protein IAA15 OS=Oryza sativa sub... [more]
IAA6_ORYSJ1.231e-1141.10Auxin-responsive protein IAA6 OS=Oryza sativa subs... [more]
IAA11_ORYSJ1.963e-1139.10Auxin-responsive protein IAA11 OS=Oryza sativa sub... [more]
IAA11_ARATH2.723e-1135.06Auxin-responsive protein IAA11 OS=Arabidopsis thal... [more]
IAA1_ARATH3.348e-1139.17Auxin-responsive protein IAA1 OS=Arabidopsis thali... [more]
IAA6_ARATH3.575e-1143.33Auxin-responsive protein IAA6 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5973 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE57C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739586 ID=CK739586; Name=CK739586; organism=Citrus sinensis; type=EST; length=393bp
CTGCTGCCAAGGCACAGGTCGTGGGTTGGCCTCCAATAAGATCATTTAGG
AAGAATTCATTGGCAACCACTTCAAAGAACAATGATGAAGTAGATGGAAA
ACCAGGTCCTGGTGCTCTTTTTATTAAGGGTAGCATGGACGGGGCTCCTT
ATTTGAGGAAGGTAGATTTGAGAACATACACCAATTATGGGGAAACTATC
TTCTGCTCTGGAGAAGATGTTCAGTTGCTTTACAATTGGTCAATGTGGAT
CACATGAAGCACCAGGGAGGGAAATGCTGAGTGAGAGCAAGTTGAAGGAT
CTTTTGCATGGATCAGAATATGTGCTTACATATGAGGACAGGATGGTGAC
TGGATGCTCGTTGGGGGATGTGCCGTGGGAGATGTTTATTGAT
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