CK739612

Overview
NameCK739612
Unique NameCK739612
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length394
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739612 vs. ExPASy Swiss-Prot
Match: 6PGD_CHLMU (6-phosphogluconate dehydrogenase, decarboxylating OS=Chlamydia muridarum GN=gnd PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.126e-17
Identity = 40/83 (48.19%), Postives = 59/83 (71.08%), Query Frame = 3
Query:  144 LIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVD 392
            LI+D R+ALYA+KI SYAQG  L++  S E+ WDL LGELA IW+GGCII++ FLD+I + ++   D  +L++   F   +++
Sbjct:  319 LIEDAREALYAAKIISYAQGFMLLKQISEERNWDLNLGELALIWRGGCIIQSAFLDKIHQGFESCPDAHSLMLQDYFKNVLLN 401          
BLAST of CK739612 vs. ExPASy Swiss-Prot
Match: 6PGD_CANAL (6-phosphogluconate dehydrogenase, decarboxylating OS=Candida albicans GN=DOR14 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.096e-17
Identity = 42/81 (51.85%), Postives = 54/81 (66.67%), Query Frame = 3
Query:  132 DKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPEF 374
            DK++ IDD+ QALYASKI SY QG  L+   + + GW L    +A +W+GGCIIR+VFL  I  AY +  DL NLL+ P F
Sbjct:  342 DKKQFIDDLEQALYASKIISYTQGFMLMNQAAKDYGWKLNNAGIALMWRGGCIIRSVFLAEITAAYRKKPDLENLLLYPFF 422          
BLAST of CK739612 vs. ExPASy Swiss-Prot
Match: 6PGD2_YEAST (6-phosphogluconate dehydrogenase, decarboxylating 2 OS=Saccharomyces cerevisiae GN=GND2 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.096e-17
Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 3
Query:  132 DKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEI 386
            D+++ + D+ QALYASKI SYAQG  LIR  +   GW L    +A +W+GGCIIR+VFL  I KAY  + DL NLL +  FA  +
Sbjct:  317 DREQFVYDLEQALYASKIISYAQGFMLIREAARSYGWKLNNPAIALMWRGGCIIRSVFLAEITKAYRDDPDLENLLFNEFFASAV 401          
BLAST of CK739612 vs. ExPASy Swiss-Prot
Match: 6PGD_BUCAI (6-phosphogluconate dehydrogenase, decarboxylating OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=gnd PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.188e-16
Identity = 40/83 (48.19%), Postives = 58/83 (69.88%), Query Frame = 3
Query:  132 DKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPEFAK 380
            DK   I++VR+ALY  KI SYAQG + ++  S +  W+LK GE+A+I++ GCIIRA FL +I   Y +N ++ NLL+ P F+K
Sbjct:  313 DKNSFIEEVRRALYLGKIISYAQGFSQLKRASEKYHWNLKYGEIAKIFRAGCIIRANFLQKITDEYTQNKNVVNLLLTPYFSK 395          
BLAST of CK739612 vs. ExPASy Swiss-Prot
Match: 6PGD_CAEEL (6-phosphogluconate dehydrogenase, decarboxylating OS=Caenorhabditis elegans GN=T25B9.9 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.552e-16
Identity = 41/87 (47.13%), Postives = 57/87 (65.52%), Query Frame = 3
Query:  132 DKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEIVD 392
            DK+  I  + +ALYASKI SYAQG  L+   S +  W+L  G +A +W+GGCIIR+ FL  I+ A+ +N  L+NLL+D  F K I +
Sbjct:  316 DKRVFIKQISKALYASKIVSYAQGFMLLAEASKQFNWNLNFGAIALMWRGGCIIRSRFLGDIEHAFQKNKQLSNLLLDDFFTKAITE 402          
BLAST of CK739612 vs. ExPASy Swiss-Prot
Match: 6PGD_SCHPO (6-phosphogluconate dehydrogenase, decarboxylating OS=Schizosaccharomyces pombe GN=SPBC660.16 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 2.647e-16
Identity = 41/85 (48.24%), Postives = 57/85 (67.06%), Query Frame = 3
Query:  132 DKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEI 386
            DK++LIDD+  ALYASKI SYAQG  L+R  + E GW L    +A +W+GGCIIR+VFL  I +A+  + +L ++L  P F   +
Sbjct:  317 DKKQLIDDLEDALYASKIISYAQGFMLMREAAKEYGWKLNNAGIALMWRGGCIIRSVFLKDITEAFREDPNLESILFHPFFTNGV 401          
BLAST of CK739612 vs. ExPASy Swiss-Prot
Match: 6PGD_TREPA (6-phosphogluconate dehydrogenase, decarboxylating OS=Treponema pallidum GN=gnd PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.313e-15
Identity = 40/103 (38.83%), Postives = 63/103 (61.17%), Query Frame = 3
Query:   78 PAKVFKSGGFGVQSNQAVDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPEFAKEI 386
            P KV K+     ++  A  +++L+  +  ALY +KI SYAQG  L+   +  +GW L    +A +W+GGCIIR+ FL +I  A+ +  DL NL++ P FA+E+
Sbjct:  306 PVKVSKA-----ETLSAQQREELVSALEDALYCAKIVSYAQGFELLSHTAKRRGWTLDFSRIASLWRGGCIIRSGFLSKISAAFAQQHDLENLVLAPFFAEEL 403          
BLAST of CK739612 vs. ExPASy Swiss-Prot
Match: 6PGD_CUNEL (6-phosphogluconate dehydrogenase, decarboxylating OS=Cunninghamella elegans GN=6-PGD PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.926e-15
Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 3
Query:  132 DKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPEF 374
            DK+  I  + QALYA+KI SYAQG  L+R  + +  W L    +A +W+GGCIIR+VFL +I+ AY +N +L NLL D  F
Sbjct:  317 DKKTFIAQLGQALYAAKIVSYAQGYMLMRQAAKDYEWKLNNAGIALMWRGGCIIRSVFLGKIRDAYTKNPELENLLFDDFF 397          
BLAST of CK739612 vs. ExPASy Swiss-Prot
Match: 6PGD_BUCBP (6-phosphogluconate dehydrogenase, decarboxylating OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=gnd PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.112e-14
Identity = 37/82 (45.12%), Postives = 54/82 (65.85%), Query Frame = 3
Query:  129 VDKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPEF 374
            +++   I+ +RQALY  KI SYAQG + + + S +  W+LKLGE++RI++ GCIIRA  L  I + Y  N +  NLL+ P F
Sbjct:  312 LNRDDFIEKIRQALYLGKIISYAQGFSQLNSASQKYNWNLKLGEISRIFQSGCIIRAKLLKNITQEYSSNNNFVNLLLTPYF 393          
BLAST of CK739612 vs. ExPASy Swiss-Prot
Match: 6PGD_HAEIN (6-phosphogluconate dehydrogenase, decarboxylating OS=Haemophilus influenzae GN=gnd PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.477e-14
Identity = 41/81 (50.62%), Postives = 52/81 (64.20%), Query Frame = 3
Query:  132 DKQKLIDDVRQALYASKICSYAQGMNLIRAKSIEKGWDLKLGELARIWKGGCIIRAVFLDRIKKAYDRNADLANLLVDPEF 374
            DK+  I+ VR+AL ASKI SYAQG  LIR  S + GWD+  G  A +W+ GCIIR+ FL  I+ AY+ N +L  L  D  F
Sbjct:  315 DKKVWIEAVRKALLASKIISYAQGFMLIREASEQFGWDINYGATALLWREGCIIRSRFLGNIRDAYEANPNLVFLGSDSYF 395          
The following BLAST results are available for this feature:
BLAST of CK739612 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
6PGD_CHLMU3.126e-1748.196-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CANAL9.096e-1751.856-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD2_YEAST9.096e-1750.596-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_BUCAI1.188e-1648.196-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CAEEL1.552e-1647.136-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_SCHPO2.647e-1648.246-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_TREPA1.313e-1538.836-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_CUNEL2.926e-1549.386-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_BUCBP1.112e-1445.126-phosphogluconate dehydrogenase, decarboxylating ... [more]
6PGD_HAEIN2.477e-1450.626-phosphogluconate dehydrogenase, decarboxylating ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_5999 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE57F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739612 ID=CK739612; Name=CK739612; organism=Citrus sinensis; type=EST; length=394bp
ATCAGTTGCAGCTCCCACTATTGCATCTTCTTTGGATGCAAGGTTCCTTA
GTGGTTTAAAGGAAGAAAGAGTTGAAGCCTGCCAAAGTCTTTAAATCAGG
TGGCTTTGGTGTTCAGTCTAACCAAGCTGTGGACAAGCAAAAGTTGATTG
ATGATGTGAGGCAGGCTCTTTATGCATCCAAGATATGTAGTTACGCACAG
GGGATGAATCTTATTCGTGCAAAGAGTATTGAAAAAGGATGGGACTTGAA
GTTGGGGGAACTGGCTAGGATTTGGAAGGGGGGTTGCATTATCCGTGCTG
TGTTCCTTGACAGAATCAAGAAGGCATACGATAGGAATGCTGATCTGGCA
AACCTTCTTGTGGACCCTGAGTTTGCAAAGGAAATTGTTGATAG
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