CK739645

Overview
NameCK739645
Unique NameCK739645
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length564
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739645 vs. ExPASy Swiss-Prot
Match: NIA1_HORVU (Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.046e-14
Identity = 32/81 (39.51%), Postives = 52/81 (64.20%), Query Frame = 3
Query:   39 MGGGDGKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEI 281
            M     K FT++EV  H + +  W++++G VYD T FL+DHPGG + +L   G D T++F+ + HS  A+ ++D Y +GE+
Sbjct:  533 MNTAGDKQFTMSEVRKHGSKESAWIVVHGHVYDCTAFLKDHPGGADSILINAGSDCTEEFDAI-HSDKAKALLDTYRIGEL 612          
BLAST of CK739645 vs. ExPASy Swiss-Prot
Match: FAD5_MORAP (Delta(5) fatty acid desaturase OS=Mortierella alpina GN=DES1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.046e-14
Identity = 41/93 (44.09%), Postives = 53/93 (56.99%), Query Frame = 3
Query:   39 MGGGDGKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTIPKKKEYT 317
            MG   GK FT  E++ HN   D +L I G+VYDVTKFL  HPGG + LL   G+D T  FE      +A  +M +YYVG +  + +P   E T
Sbjct:    1 MGTDQGKTFTWEELAAHNTKGDLFLAIRGRVYDVTKFLSRHPGGVDTLLLGAGRDVTPVFEMYHAFGAADAIMKKYYVGTLVSNELPVFPEPT 93          
BLAST of CK739645 vs. ExPASy Swiss-Prot
Match: NIA1_TOBAC (Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN=NIA1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.632e-13
Identity = 27/75 (36.00%), Postives = 55/75 (73.33%), Query Frame = 3
Query:   57 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEI 281
            K+++++EV  H++    W+I++G +YD T+FL+DHPGG + +L   G D T++F+ + HS  A+++++++ +GE+
Sbjct:  532 KMYSMSEVRKHSSADSAWIIVHGHIYDATRFLKDHPGGSDSILINAGTDCTEEFDAI-HSDKAKKLLEEFRIGEL 605          
BLAST of CK739645 vs. ExPASy Swiss-Prot
Match: NIA_SPIOL (Nitrate reductase [NADH] OS=Spinacia oleracea GN=NIA PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.437e-13
Identity = 31/93 (33.33%), Postives = 58/93 (62.37%), Query Frame = 3
Query:   57 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTIPKKKEYTPPKQPH 335
            K+++++EV  HN     W++++G VY+ T+FL+DHPGG + +L   G D T++F+ + HS  A+ +++ + +GE+ +ST       +P    H
Sbjct:  552 KMYSMSEVKKHNTADSAWIVVHGNVYNATRFLKDHPGGSDSILINAGTDCTEEFDAI-HSDKAKRLLEDFRIGEL-ISTGYTSDSSSPGNSVH 642          
BLAST of CK739645 vs. ExPASy Swiss-Prot
Match: NIA2_TOBAC (Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN=NIA2 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 5.863e-13
Identity = 27/75 (36.00%), Postives = 54/75 (72.00%), Query Frame = 3
Query:   57 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEI 281
            K+++++EV  H++    W+I++G +YD T+FL+DHPGG + +L   G D T++F+ + HS  A+++++ + +GE+
Sbjct:  532 KMYSMSEVRKHSSADSAWIIVHGHIYDATRFLKDHPGGTDSILINAGTDCTEEFDAI-HSDKAKKLLEDFRIGEL 605          
BLAST of CK739645 vs. ExPASy Swiss-Prot
Match: NIA_SOLLC (Nitrate reductase [NADH] OS=Solanum lycopersicum GN=NIA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.658e-13
Identity = 27/75 (36.00%), Postives = 54/75 (72.00%), Query Frame = 3
Query:   57 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEI 281
            K+++++EV  HN+    W+I++G +YD ++FL+DHPGG + +L   G D T++F+ + HS  A+++++ + +GE+
Sbjct:  537 KMYSMSEVRKHNSSDSAWIIVHGHIYDASRFLKDHPGGVDSILINAGTDCTEEFDAI-HSDKAKKLLEDFRIGEL 610          
BLAST of CK739645 vs. ExPASy Swiss-Prot
Match: NB5R4_XENTR (Cytochrome b5 reductase 4 OS=Xenopus tropicalis GN=cyb5r4 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.000e-12
Identity = 31/84 (36.90%), Postives = 50/84 (59.52%), Query Frame = 3
Query:   66 TLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTIPKKKEYT 317
            T  E++ HN  +DCW+ I G VY++T ++E HPGG+E L+ A G+D TD F+ V    +   M+ +  +G + +  +   KE T
Sbjct:   58 TEEELAQHNKKEDCWICIRGMVYNITPYMEYHPGGEEELMKAAGRDGTDLFDQVHRWVNYESMLKECLIGRMAIKHVSISKEVT 141          
BLAST of CK739645 vs. ExPASy Swiss-Prot
Match: NIA_EMENI (Nitrate reductase [NADPH] OS=Emericella nidulans GN=niaD PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.306e-12
Identity = 31/83 (37.35%), Postives = 57/83 (68.67%), Query Frame = 3
Query:   48 GDGKVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTI 296
            G  ++  L E   +++ +  W ++NG+VYD T FLE HPGG + ++SA G DA+++F ++ HS +A++MM  Y++G +D +++
Sbjct:  510 GVTRIIDLEEFKKNSSDERPWFVVNGEVYDGTAFLEGHPGGAQSIISAAGTDASEEFLEI-HSETAKKMMPDYHIGTLDKASL 591          
BLAST of CK739645 vs. ExPASy Swiss-Prot
Match: NIA_NEUCR (Nitrate reductase [NADPH] OS=Neurospora crassa GN=nit-3 PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 1.706e-12
Identity = 37/106 (34.91%), Postives = 59/106 (55.66%), Query Frame = 3
Query:   57 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAREMMDQYYVGEIDVSTIPKKKE-------YTPPKQPHYNQDKT 353
            ++ TL E+  H+  ++ W ++NG+VY+ T FLE HPGG   +  A G+D TD+F  + HS +A+ MM  Y++G +  S     K         + P +P + Q KT
Sbjct:  618 RLITLEELRQHDGEEEPWFVVNGQVYNGTPFLEGHPGGAASITGAAGQDVTDEFLAI-HSENAKAMMPTYHIGTLTPSAPAALKSSSTSDPALSDPSRPIFLQSKT 722          
BLAST of CK739645 vs. ExPASy Swiss-Prot
Match: FAD5B_DICDI (Delta(5) fatty acid desaturase B OS=Dictyostelium discoideum GN=fadB PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12
Identity = 36/87 (41.38%), Postives = 56/87 (64.37%), Query Frame = 3
Query:   57 KVFTLAEVSDHNNMKDCWLIINGKVYDVTKFLEDHPGGDEVLLSATGKDATDDFEDVGHSPSAR--EMMDQYYVGEIDVSTIPKKKE 311
            K++T  EVS HN   D W+I++GKVY++TK++  HPGG+++LL + G+DAT+ FE   H  + +   ++ QY +G I     PK  E
Sbjct:   13 KLYTWDEVSKHNQKNDLWIIVDGKVYNITKWVPLHPGGEDILLLSAGRDATNLFESY-HPMTDKHYSLIKQYEIGYISSYEHPKYVE 98          
The following BLAST results are available for this feature:
BLAST of CK739645 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
NIA1_HORVU9.046e-1439.51Nitrate reductase [NADH] OS=Hordeum vulgare PE=3 S... [more]
FAD5_MORAP9.046e-1444.09Delta(5) fatty acid desaturase OS=Mortierella alpi... [more]
NIA1_TOBAC2.632e-1336.00Nitrate reductase [NADH] 1 OS=Nicotiana tabacum GN... [more]
NIA_SPIOL3.437e-1333.33Nitrate reductase [NADH] OS=Spinacia oleracea GN=N... [more]
NIA2_TOBAC5.863e-1336.00Nitrate reductase [NADH] 2 OS=Nicotiana tabacum GN... [more]
NIA_SOLLC7.658e-1336.00Nitrate reductase [NADH] OS=Solanum lycopersicum G... [more]
NB5R4_XENTR1.000e-1236.90Cytochrome b5 reductase 4 OS=Xenopus tropicalis GN... [more]
NIA_EMENI1.306e-1237.35Nitrate reductase [NADPH] OS=Emericella nidulans G... [more]
NIA_NEUCR1.706e-1234.91Nitrate reductase [NADPH] OS=Neurospora crassa GN=... [more]
FAD5B_DICDI2.910e-1241.38Delta(5) fatty acid desaturase B OS=Dictyostelium ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6032 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE58A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739645 ID=CK739645; Name=CK739645; organism=Citrus sinensis; type=EST; length=564bp
TTACCTACATTGTTGAAGAGAGCTGAAGGGAGCATACAATGGGTGGTGGT
GATGGCAAGGTCTTCACTTTGGCTGAAGTATCTGATCACAACAACATGAA
AGATTGTTGGCTCATCATCAATGGCAAGGTGTATGACGTGACAAAATTCT
TGGAAGATCATCCTGGAGGTGATGAAGTTTTGCTGTCTGCAACAGGGAAG
GATGCCACGGATGACTTTGAAGATGTGGGTCATAGTCCGAGTGCCAGAGA
AATGATGGACCAGTACTACGTCGGAGAGATTGATGTATCGACCATCCCAA
AGAAAAAGGAGTATACACCTCCAAAGCAGCCTCACTACAACCAGGACAAG
ACATCAGAGTTCATCATCAGGCTTCTCCAATTCCTTGTGCCGCTAGCAAT
CCTGGGGTTGGCCGTCGGCATCCGGATTTATACAAAATCATCTTAATGTT
CTAGACTATGTTCTCATAACAGACAATTTGTGTCATCTTAATGTTCTAGA
TTATGTTTTCATAACAGACAATTTGTGTTTTGTTAATGAAACTTTCTTAG
TTCTGATAAAAAAA
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