CK739648

Overview
NameCK739648
Unique NameCK739648
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length508
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739648 vs. ExPASy Swiss-Prot
Match: METK2_PICSI (S-adenosylmethionine synthetase 2 OS=Picea sitchensis GN=METK2 PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 2.646e-69
Identity = 126/151 (83.44%), Postives = 133/151 (88.08%), Query Frame = 2
Query:    2 PHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 454
            PHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA GLARRC+VQVSYAIGVPEPLSVFVDSYGTG IPDKEIL+++KE+FDFRPGM+TINLDLKRGGNGRF KTAAYGHFGRDDPDFTWE VKPLKW+K QA
Sbjct:  243 PHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVPEPLSVFVDSYGTGSIPDKEILELIKENFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWETVKPLKWDKAQA 393          
BLAST of CK739648 vs. ExPASy Swiss-Prot
Match: METK2_CATRO (S-adenosylmethionine synthetase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 4.514e-69
Identity = 128/151 (84.77%), Postives = 135/151 (89.40%), Query Frame = 2
Query:    2 PHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 454
            PHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGR+DPDFTWEVVKPLK+EK +A
Sbjct:  243 PHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKFEKVEA 393          
BLAST of CK739648 vs. ExPASy Swiss-Prot
Match: METK_PHALU (S-adenosylmethionine synthetase OS=Phaseolus lunatus GN=SAMS PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 5.895e-69
Identity = 127/148 (85.81%), Postives = 133/148 (89.86%), Query Frame = 2
Query:    2 PHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 445
            PHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+ LARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGM++INLDLKRGGN RFLKTAAYGHFGR+DPDFTWEVVKPLKWEK
Sbjct:  244 PHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASELARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKWEK 391          
BLAST of CK739648 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 5.895e-69
Identity = 130/151 (86.09%), Postives = 134/151 (88.74%), Query Frame = 2
Query:    2 PHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 454
            PHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEIL+IVKESFDFRPGM++INLDLKRGGNGRFLKTAAYGHFGRDD DFTWEVVKPLK  K QA
Sbjct:  243 PHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILEIVKESFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKPLKSNKVQA 393          
BLAST of CK739648 vs. ExPASy Swiss-Prot
Match: METK3_ORYSJ (S-adenosylmethionine synthetase 3 OS=Oryza sativa subsp. japonica GN=METK3 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 7.699e-69
Identity = 125/151 (82.78%), Postives = 133/151 (88.08%), Query Frame = 2
Query:    2 PHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 454
            PHGDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPD+EIL+IV E+FDFRPGM+ INLDL RGGNGR+LKTAAYGHFGR+DPDFTWEVVKPLKWE+P A
Sbjct:  246 PHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILRIVTENFDFRPGMIIINLDLMRGGNGRYLKTAAYGHFGREDPDFTWEVVKPLKWEEPSA 396          
BLAST of CK739648 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.006e-68
Identity = 126/151 (83.44%), Postives = 132/151 (87.42%), Query Frame = 2
Query:    2 PHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 454
            PHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLS+FVD+YGTG IPDKEIL+I+KE FDFRPGM++INLDLKRGGNGR  KTAAYGHFGRDDPDFTWE VKPLKWEK QA
Sbjct:  243 PHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSLFVDTYGTGSIPDKEILEIIKEHFDFRPGMISINLDLKRGGNGRSQKTAAYGHFGRDDPDFTWETVKPLKWEKAQA 393          
BLAST of CK739648 vs. ExPASy Swiss-Prot
Match: METK3_PETHY (S-adenosylmethionine synthetase 3 OS=Petunia hybrida GN=SAM3 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.006e-68
Identity = 128/150 (85.33%), Postives = 132/150 (88.00%), Query Frame = 2
Query:    2 PHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 451
            PHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VANGLARRCIVQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKE+FDFRPGM+ INLDLKRGGNGRFLKTAAYGHFGRDD DFTWEVVKPLK EK Q
Sbjct:  243 PHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGMIPDKEILKIVKENFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDTDFTWEVVKPLKCEKAQ 392          
BLAST of CK739648 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 1.715e-68
Identity = 127/151 (84.11%), Postives = 132/151 (87.42%), Query Frame = 2
Query:    2 PHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 454
            PHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVANGLARR IVQVSYAIGVPEPLSVFVD+YGTGKIPDK+ILKIVKE+FDFRPGM++INLDLKRGGN RF KTAAYGHFGRDDPDFTWE VKPLKWEK  A
Sbjct:  243 PHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRAIVQVSYAIGVPEPLSVFVDTYGTGKIPDKDILKIVKENFDFRPGMISINLDLKRGGNARFQKTAAYGHFGRDDPDFTWETVKPLKWEKVPA 393          
BLAST of CK739648 vs. ExPASy Swiss-Prot
Match: METK4_HORVU (S-adenosylmethionine synthetase 4 OS=Hordeum vulgare GN=SAM4 PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 2.926e-68
Identity = 125/151 (82.78%), Postives = 133/151 (88.08%), Query Frame = 2
Query:    2 PHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 454
            PHGDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQAAKSIVA+G+ARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEIL+IVKE+FDFRPGM+ INLDLKRGG+GR+LKTAAYGHFGRD  DFTWEVVKPLKWEKP A
Sbjct:  246 PHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASGIARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILEIVKENFDFRPGMIIINLDLKRGGSGRYLKTAAYGHFGRDGADFTWEVVKPLKWEKPSA 396          
BLAST of CK739648 vs. ExPASy Swiss-Prot
Match: METK2_ORYSJ (S-adenosylmethionine synthetase 2 OS=Oryza sativa subsp. japonica GN=SAM2 PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 4.991e-68
Identity = 128/148 (86.49%), Postives = 133/148 (89.86%), Query Frame = 2
Query:    2 PHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 445
            PHGDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKE+FDFRPGMMTINLDLKRGGN RF+KTAAYGHFGR+DPDFTWEVVKPLK+EK
Sbjct:  245 PHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMMTINLDLKRGGN-RFIKTAAYGHFGREDPDFTWEVVKPLKYEK 391          
The following BLAST results are available for this feature:
BLAST of CK739648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_PICSI2.646e-6983.44S-adenosylmethionine synthetase 2 OS=Picea sitchen... [more]
METK2_CATRO4.514e-6984.77S-adenosylmethionine synthetase 2 OS=Catharanthus ... [more]
METK_PHALU5.895e-6985.81S-adenosylmethionine synthetase OS=Phaseolus lunat... [more]
METK2_BRAJU5.895e-6986.09S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK3_ORYSJ7.699e-6982.78S-adenosylmethionine synthetase 3 OS=Oryza sativa ... [more]
METK_PINBN1.006e-6883.44S-adenosylmethionine synthetase OS=Pinus banksiana... [more]
METK3_PETHY1.006e-6885.33S-adenosylmethionine synthetase 3 OS=Petunia hybri... [more]
METK2_SUASA1.715e-6884.11S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK4_HORVU2.926e-6882.78S-adenosylmethionine synthetase 4 OS=Hordeum vulga... [more]
METK2_ORYSJ4.991e-6886.49S-adenosylmethionine synthetase 2 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6035 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE58A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739648 ID=CK739648; Name=CK739648; organism=Citrus sinensis; type=EST; length=508bp
GCCTCATGGTGATGCTGGTCTCACTGGACGTAAGATCATCATCGACACTT
ATGGTGGCTGGGGAGCCCATGGTGGCGGTGCTTTCTCTGGAAAAGACCCT
ACTAAGGTGGATAGGAGTGGTGCATACATTGTTAGGCAGGCTGCTAAGAG
CATTGTTGCAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCCTATG
CCATTGGTGTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATATGGAACC
GGCAAGATTCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAAGCTTTGA
TTTCAGGCCAGGAATGATGACCATCAATTTGGATCTCAAAAGGGGCGGTA
ATGGCAGGTTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGGGATGAC
CCAGACTTCACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCA
AGCTTAAATCTGAGTTGAAAGTGAAAACTATCCCTGCTGTTCAAGTTTGC
TTCTATTG
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