CK739655
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739655 vs. ExPASy Swiss-Prot
Match: G3PA_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Scenedesmus vacuolatus GN=GapA PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 7.436e-12 Identity = 42/126 (33.33%), Postives = 67/126 (53.17%), Query Frame = 2 Query: 65 CRGTMLNSLLLMIPLSQPDYM---TYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNENEYK 427 C T NSLL +I ++ + +++ KYDS G++ ++K+ DD + K + V R+P ++PW E + V+E TGVF V+I+AP+K D P +VVGVN ++YK Sbjct: 13 CLETRQNSLLEVIAINDSGGVKQASHLLKYDSTLGKFDA-DVKIVDDGHISVNGKSIRVVSSRDPTKLPWGEMEIDLVIEGTGVFIDTPGASKHIEAGAKKVLITAPAKGSDIPTYVVGVNAHDYK 137
BLAST of CK739655 vs. ExPASy Swiss-Prot
Match: G3PA_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Gracilaria verrucosa GN=GAPA PE=2 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 8.907e-12 Identity = 35/101 (34.65%), Postives = 52/101 (51.49%), Query Frame = 2 Query: 128 TYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM--FVVGVNENEY 424 +++ KYDS+ G + + +D T+ K + V RNP E+PW E + VVE+TGVF V+I+AP K + FVVGVN++ Y Sbjct: 122 SHLLKYDSILGTFDSDVVAGEDSITV--DGKTIKVVSNRNPLELPWKEMEIDIVVEATGVFVDAVGAGKHIQAGAKKVLITAPGKGEGVGTFVVGVNDHLY 220 HSP 2 Score: 33.4982 bits (75), Expect = 8.907e-12 Identity = 17/35 (48.57%), Postives = 23/35 (65.71%), Query Frame = 1 Query: 4 KVKIGINGFGRIGRLVARVILQRDD--VELVAVND 102 KV++ INGFGRIGR R R D +++V +ND Sbjct: 80 KVRVAINGFGRIGRNFIRCWAGRTDSNMDVVCIND 114
BLAST of CK739655 vs. ExPASy Swiss-Prot
Match: E4PD_SHEPA (D-erythrose-4-phosphate dehydrogenase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=epd PE=3 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 8.963e-12 Identity = 33/112 (29.46%), Postives = 61/112 (54.46%), Query Frame = 2 Query: 107 LSQPDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK---DAPMFVVGVNENEYKPE 433 L++P+ M ++ +YD+ HG++ H ++K+ D++ ++ G+ + + +P ++PW E + V E+TGV V+IS PS DA + V GVN++ K E Sbjct: 37 LAKPEAMLHLTQYDTTHGRF-HTQVKL-DNQHMIIGDDAIKLLHEPDPAKLPWKEMDIDIVFEATGVINDRLECEAHIQAGAKQVLISHPSSSDVDATI-VFGVNQDLLKAE 145 HSP 2 Score: 36.1946 bits (82), Expect = 8.963e-12 Identity = 14/35 (40.00%), Postives = 26/35 (74.29%), Query Frame = 1 Query: 7 VKIGINGFGRIGRLVARVILQ---RDDVELVAVND 102 +++ ING+GRIGR + R + + RD +++VA+N+ Sbjct: 2 IRVAINGYGRIGRSILRALYESAKRDRIQIVAINE 36
BLAST of CK739655 vs. ExPASy Swiss-Prot
Match: G3P_HALVA (Glyceraldehyde-3-phosphate dehydrogenase OS=Haloarcula vallismortis GN=gap PE=3 SV=1) HSP 1 Score: 46.2098 bits (108), Expect = 8.968e-12 Identity = 20/32 (62.50%), Postives = 25/32 (78.12%), Query Frame = 1 Query: 7 VKIGINGFGRIGRLVARVILQRDDVELVAVND 102 V++G+NGFGRIGR V R L DDVE+V +ND Sbjct: 6 VRVGLNGFGRIGRNVFRASLHSDDVEIVGIND 37 HSP 2 Score: 43.5134 bits (101), Expect = 8.968e-12 Identity = 32/106 (30.19%), Postives = 48/106 (45.28%), Query Frame = 2 Query: 131 YMFKYDSVHGQWKHHELKVKDDKTLLFG--EKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPM--FVVGVNENEYKPE 433 Y +YDSV G+ + + DD L + +F +P ++PW + + E+TG+F V+ISAP K D P+ V GVN +EY E Sbjct: 46 YFAQYDSVMGELEGASV---DDGVLTVDGTDFEAGIFHETDPTQLPWDDLDVDVAFEATGIFRTKEDASQHLDAGADKVLISAPPKGDEPVKQLVYGVNHDEYDGE 148
BLAST of CK739655 vs. ExPASy Swiss-Prot
Match: G3P_ENTAE (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Enterobacter aerogenes GN=gap PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.518e-11 Identity = 38/107 (35.51%), Postives = 55/107 (51.40%), Query Frame = 2 Query: 107 LSQPDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNENEY 424 L +YM YM KYDS HG++ ++VKD ++ G K + V ++P + W E G + V E+TG+F V+++ PSKD PMFV G N Y Sbjct: 20 LLDAEYMAYMLKYDSTHGRFDG-TVEVKDGHLVVNG-KTIRVTAEKDPANLKWNEIGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVRGANFETY 124 HSP 2 Score: 22.7126 bits (47), Expect = 1.518e-11 Identity = 8/19 (42.11%), Postives = 13/19 (68.42%), Query Frame = 1 Query: 46 LVARVILQRDDVELVAVND 102 +V R +R D+E+V +ND Sbjct: 1 IVFRAAQKRSDIEIVGIND 19
BLAST of CK739655 vs. ExPASy Swiss-Prot
Match: E4PD_AERHH (D-erythrose-4-phosphate dehydrogenase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=epd PE=3 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 4.292e-11 Identity = 31/105 (29.52%), Postives = 58/105 (55.24%), Query Frame = 2 Query: 107 LSQPDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK---DAPMFVVGVN 412 L+ P+ M ++ ++D+ HG++ HH +++ + ++L GE +++F R+P +PW G + V++ TGVF V+ S P++ DA + V GVN Sbjct: 37 LAAPEAMVHLTRFDTSHGRF-HHPVQLAGN-SMLVGEDLISLFAERDPSRLPWRALGVDVVLDCTGVFGSRADAELHLAAGAGKVLFSHPAEADVDATI-VYGVN 138 HSP 2 Score: 34.2686 bits (77), Expect = 4.292e-11 Identity = 17/35 (48.57%), Postives = 27/35 (77.14%), Query Frame = 1 Query: 7 VKIGINGFGRIGRLVARVILQ--RD-DVELVAVND 102 +KI ING+GRIGR V R + + RD ++++VA+N+ Sbjct: 2 IKIAINGYGRIGRNVLRALYESGRDKNIKIVAINE 36
BLAST of CK739655 vs. ExPASy Swiss-Prot
Match: G3P2_STAES (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gapA2 PE=3 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 9.383e-11 Identity = 30/105 (28.57%), Postives = 51/105 (48.57%), Query Frame = 2 Query: 116 PDYMTYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNENE 421 P+ + ++ YD+ HG + + KV+ + + + + RNPE +PW E + V+E+TG F V+++ PSK D M V GVN+N+ Sbjct: 38 PETIAHLLNYDTTHGVY---DKKVEPIESGIKVNGHEIKLLSDRNPENLPWNEMDIDVVIEATGKFNHGDKAVAHINAGAKKVLLTGPSKGGDVQMIVKGVNDNQ 139 HSP 2 Score: 33.4982 bits (75), Expect = 9.383e-11 Identity = 14/29 (48.28%), Postives = 20/29 (68.97%), Query Frame = 1 Query: 13 IGINGFGRIGRLVARVILQRDDVELVAVN 99 I ING GRIGR+V R+ L ++ + A+N Sbjct: 5 IAINGMGRIGRMVLRIALNNKNLNVKAIN 33
BLAST of CK739655 vs. ExPASy Swiss-Prot
Match: G3P2_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA2 PE=3 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 9.383e-11 Identity = 30/105 (28.57%), Postives = 51/105 (48.57%), Query Frame = 2 Query: 116 PDYMTYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNENE 421 P+ + ++ YD+ HG + + KV+ + + + + RNPE +PW E + V+E+TG F V+++ PSK D M V GVN+N+ Sbjct: 38 PETIAHLLNYDTTHGVY---DKKVEPIESGIKVNGHEIKLLSDRNPENLPWNEMDIDVVIEATGKFNHGDKAVAHINAGAKKVLLTGPSKGGDVQMIVKGVNDNQ 139 HSP 2 Score: 33.4982 bits (75), Expect = 9.383e-11 Identity = 14/29 (48.28%), Postives = 20/29 (68.97%), Query Frame = 1 Query: 13 IGINGFGRIGRLVARVILQRDDVELVAVN 99 I ING GRIGR+V R+ L ++ + A+N Sbjct: 5 IAINGMGRIGRMVLRIALNNKNLNVKAIN 33 The following BLAST results are available for this feature:
BLAST of CK739655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739655 ID=CK739655; Name=CK739655; organism=Citrus sinensis; type=EST; length=436bpback to top |