CK739667

Overview
NameCK739667
Unique NameCK739667
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK1_SOLLC (S-adenosylmethionine synthetase 1 OS=Solanum lycopersicum GN=SAM1 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.419e-59
Identity = 110/116 (94.83%), Postives = 115/116 (99.14%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 349
            KVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPD+EILKIVKE+FDFRPGMM+INLDLKRGGN RFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ
Sbjct:  277 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKENFDFRPGMMSINLDLKRGGNRRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 392          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK2_SOLLC (S-adenosylmethionine synthetase 2 OS=Solanum lycopersicum GN=SAM2 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.420e-59
Identity = 109/117 (93.16%), Postives = 115/117 (98.29%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 352
            KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEIL IVKE+FDFRPGM++INLDL RGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW+KP+A
Sbjct:  277 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILNIVKENFDFRPGMISINLDLLRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPEA 393          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK3_ACTCH (S-adenosylmethionine synthetase 3 (Fragment) OS=Actinidia chinensis GN=SAM3 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.127e-59
Identity = 110/116 (94.83%), Postives = 114/116 (98.28%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 349
            KVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKESFDFRPGM+ I+LDLKRGGNGRFLKTAAYGHFGRDD DFTWEVVKPLKWEKPQ
Sbjct:  244 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKESFDFRPGMIAIHLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKPLKWEKPQ 359          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK2_DAUCA (S-adenosylmethionine synthetase 2 OS=Daucus carota GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.127e-59
Identity = 110/117 (94.02%), Postives = 113/117 (96.58%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 352
            KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVP+PLSVFVDSYGTG IPDKEILKIVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGRDD DFTWEVVKPLKWEKPQA
Sbjct:  277 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPDPLSVFVDSYGTGNIPDKEILKIVKETFDFRPGMIAINLDLKRGGNNRFLKTAAYGHFGRDDADFTWEVVKPLKWEKPQA 393          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK1_BRAJU (S-adenosylmethionine synthetase 1 OS=Brassica juncea GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.127e-59
Identity = 108/117 (92.31%), Postives = 114/117 (97.44%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 352
            KVDRSGAYIVRQ+AKS+VANG+ARR +VQVSYAIGVPEP SVFVD+YGTG IPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  277 KVDRSGAYIVRQSAKSVVANGMARRALVQVSYAIGVPEPFSVFVDTYGTGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK_SOLBR (S-adenosylmethionine synthetase OS=Solanum brevidens GN=SAMS PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 5.390e-59
Identity = 109/116 (93.97%), Postives = 114/116 (98.28%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 349
            KVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPD+EILKIVKE+FDFRPGMM+INLDLKRGGNGRFLKTAAYGHFGRDD DFTWEVVKPLKWE PQ
Sbjct:  277 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKENFDFRPGMMSINLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKPLKWENPQ 392          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK1_ARATH (S-adenosylmethionine synthetase 1 OS=Arabidopsis thaliana GN=SAM1 PE=1 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 5.390e-59
Identity = 109/117 (93.16%), Postives = 114/117 (97.44%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 352
            KVDRSGAYIVRQAAKS+VANG+ARR +VQVSYAIGVPEPLSVFVD+Y TG IPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  277 KVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYETGLIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK_LITCN (S-adenosylmethionine synthetase OS=Litchi chinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 7.040e-59
Identity = 108/117 (92.31%), Postives = 116/117 (99.15%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 352
            KVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPD+EILKIVKE+FDFRPGM+++NLDLKRGGNGRFLKTAAYGHFGR+DPDFTWEVVKPLKW+K QA
Sbjct:  277 KVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILKIVKENFDFRPGMISVNLDLKRGGNGRFLKTAAYGHFGREDPDFTWEVVKPLKWDKVQA 393          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK2_ARATH (S-adenosylmethionine synthetase 2 OS=Arabidopsis thaliana GN=SAM2 PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 7.040e-59
Identity = 108/117 (92.31%), Postives = 114/117 (97.44%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 352
            KVDRSGAYIVRQAAKS+VANG+ARR +VQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKE+FDFRPGMMTINLDLKRGGNGRF KTAAYGHFGRDDPDFTWEVVKPLKW+KPQA
Sbjct:  277 KVDRSGAYIVRQAAKSVVANGMARRALVQVSYAIGVPEPLSVFVDTYGTGLIPDKEILKIVKETFDFRPGMMTINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 393          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK1_CATRO (S-adenosylmethionine synthetase 1 OS=Catharanthus roseus GN=SAMS1 PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 7.040e-59
Identity = 109/114 (95.61%), Postives = 113/114 (99.12%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 343
            KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGM+ INLDLKRGG+GRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK
Sbjct:  277 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGSGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 390          
The following BLAST results are available for this feature:
BLAST of CK739667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_SOLLC1.419e-5994.83S-adenosylmethionine synthetase 1 OS=Solanum lycop... [more]
METK2_SOLLC2.420e-5993.16S-adenosylmethionine synthetase 2 OS=Solanum lycop... [more]
METK3_ACTCH4.127e-5994.83S-adenosylmethionine synthetase 3 (Fragment) OS=Ac... [more]
METK2_DAUCA4.127e-5994.02S-adenosylmethionine synthetase 2 OS=Daucus carota... [more]
METK1_BRAJU4.127e-5992.31S-adenosylmethionine synthetase 1 OS=Brassica junc... [more]
METK_SOLBR5.390e-5993.97S-adenosylmethionine synthetase OS=Solanum brevide... [more]
METK1_ARATH5.390e-5993.16S-adenosylmethionine synthetase 1 OS=Arabidopsis t... [more]
METK_LITCN7.040e-5992.31S-adenosylmethionine synthetase OS=Litchi chinensi... [more]
METK2_ARATH7.040e-5992.31S-adenosylmethionine synthetase 2 OS=Arabidopsis t... [more]
METK1_CATRO7.040e-5995.61S-adenosylmethionine synthetase 1 OS=Catharanthus ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6054 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone 58C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739667 ID=CK739667; Name=CK739667; organism=Citrus sinensis; type=EST; length=642bp
TAAGGTGGATAGGAGTGGTGCATACATTGTTAGGCAGGCTGCTAAGAGCA
TTGTTGCAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCC
ATTGGTGTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATATGGAACCGG
CAAGATTCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAAGCTTTGATT
TCAGGCCAGGAATGATGACCATCAATTTGGATCTCAAAAGGGGCGGTAAT
GGCAGGTTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGGGATGACCC
AGACTTCACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAG
CTTAAATTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTCAAGTTTGCT
TCTATTGGTAGTGGATGAATAATTTGAATATTATCTTGCTGCTGCTTTGT
AATACTAAGCAAATCTCCTGTGTTCAGAACTCATACATGTTCCCCATTCA
ATTCCTTTCTTTTTCTTCTTTCCCCACTTCTTTTTTGGTTTTGGTTTAAT
GTACCATGTCACCACTGTTGTGTAGTGATATCGATTGAGAATTTTGCTCA
ACTGGTGCCTGGAATTAGTAAAATTCTTCCTTTTGCTTACGA
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