CK739667

Overview
NameCK739667
Unique NameCK739667
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK_HELHP (S-adenosylmethionine synthetase OS=Helicobacter hepaticus GN=metK PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.002e-21
Identity = 53/105 (50.48%), Postives = 72/105 (68.57%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 316
            KVDRS AY  R  AK++VA+G+  + IVQV+YAIGV EP+S+ VD+ GTGK+ D ++ + VK  F   P  +  +LDL R     + KTAAYGHFGR+  +F+WE
Sbjct:  270 KVDRSAAYAARYVAKNLVASGVCDKAIVQVAYAIGVVEPVSILVDTQGTGKVEDSKLTECVKAVFRLTPKGIIESLDLLR---PIYRKTAAYGHFGRELNEFSWE 371          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK_FINM2 (S-adenosylmethionine synthetase OS=Finegoldia magna (strain ATCC 29328) GN=metK PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.002e-21
Identity = 49/105 (46.67%), Postives = 73/105 (69.52%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 316
            K DRS AY  R  AK++VA GL  +C V  SYAIGV +P+S+F++++GT KI +++I++ + E+FD RP  +   LDL+R     + + A+YGHFGR+D D +WE
Sbjct:  279 KTDRSAAYFARYIAKNVVAAGLCDKCEVGFSYAIGVAKPISMFINTFGTNKIEEEKIIQAINENFDARPKAIIDKLDLQR---PIYREVASYGHFGRNDLDLSWE 380          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK_ENTFA (S-adenosylmethionine synthetase OS=Enterococcus faecalis GN=metK PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.002e-21
Identity = 49/105 (46.67%), Postives = 75/105 (71.43%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 316
            KVDRS +Y  R  AK+IVA GLA++  VQ++YAIGV +P+S+ ++++GT  +P+ ++++ V+++FD RP  +   LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  279 KVDRSASYAARYIAKNIVAAGLAKKVEVQLAYAIGVAQPVSISINTFGTSDLPESKLIEAVRKNFDLRPAGIIEMLDLRR---PIYKQTAAYGHFGRTDIDLPWE 380          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK_ENT38 (S-adenosylmethionine synthetase OS=Enterobacter sp. (strain 638) GN=metK PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.002e-21
Identity = 55/105 (52.38%), Postives = 72/105 (68.57%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 316
            KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  270 KVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKLPTEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK_DESDG (S-adenosylmethionine synthetase OS=Desulfovibrio desulfuricans (strain G20) GN=metK PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.002e-21
Identity = 51/105 (48.57%), Postives = 73/105 (69.52%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 316
            KVDRSGAY+ R  AK++VA GLA +C VQ++Y IGV +P+SV   S G+  I D+ + + V++ FD RP  ++  LDL+R     + K+A YGHFGR+ P+F+WE
Sbjct:  276 KVDRSGAYMGRYIAKNVVAAGLAPKCEVQIAYCIGVADPVSVLCTSLGSSDISDEVLTQAVRDVFDLRPYHISKRLDLRR---PIYKKSACYGHFGREIPEFSWE 377          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK_YERPY (S-adenosylmethionine synthetase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=metK PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.615e-21
Identity = 56/105 (53.33%), Postives = 71/105 (67.62%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 316
            KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT KIP  ++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  270 KVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVEAFGTEKIPADQLTLLVREFFDLRPYGLIKMLDLL---HPIYRETAAYGHFGRE--HFPWE 369          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK_YERPS (S-adenosylmethionine synthetase OS=Yersinia pseudotuberculosis GN=metK PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.615e-21
Identity = 56/105 (53.33%), Postives = 71/105 (67.62%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 316
            KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT KIP  ++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  270 KVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVEAFGTEKIPADQLTLLVREFFDLRPYGLIKMLDLL---HPIYRETAAYGHFGRE--HFPWE 369          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK_YERPP (S-adenosylmethionine synthetase OS=Yersinia pestis (strain Pestoides F) GN=metK PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.615e-21
Identity = 56/105 (53.33%), Postives = 71/105 (67.62%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 316
            KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT KIP  ++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  270 KVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVEAFGTEKIPADQLTLLVREFFDLRPYGLIKMLDLL---HPIYRETAAYGHFGRE--HFPWE 369          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK_YERPN (S-adenosylmethionine synthetase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=metK PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.615e-21
Identity = 56/105 (53.33%), Postives = 71/105 (67.62%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 316
            KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT KIP  ++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  270 KVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVEAFGTEKIPADQLTLLVREFFDLRPYGLIKMLDLL---HPIYRETAAYGHFGRE--HFPWE 369          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK_YERPG (S-adenosylmethionine synthetase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=metK PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.615e-21
Identity = 56/105 (53.33%), Postives = 71/105 (67.62%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 316
            KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT KIP  ++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  270 KVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVEAFGTEKIPADQLTLLVREFFDLRPYGLIKMLDLL---HPIYRETAAYGHFGRE--HFPWE 369          
The following BLAST results are available for this feature:
BLAST of CK739667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_HELHP2.002e-2150.48S-adenosylmethionine synthetase OS=Helicobacter he... [more]
METK_FINM22.002e-2146.67S-adenosylmethionine synthetase OS=Finegoldia magn... [more]
METK_ENTFA2.002e-2146.67S-adenosylmethionine synthetase OS=Enterococcus fa... [more]
METK_ENT382.002e-2152.38S-adenosylmethionine synthetase OS=Enterobacter sp... [more]
METK_DESDG2.002e-2148.57S-adenosylmethionine synthetase OS=Desulfovibrio d... [more]
METK_YERPY2.615e-2153.33S-adenosylmethionine synthetase OS=Yersinia pseudo... [more]
METK_YERPS2.615e-2153.33S-adenosylmethionine synthetase OS=Yersinia pseudo... [more]
METK_YERPP2.615e-2153.33S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPN2.615e-2153.33S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPG2.615e-2153.33S-adenosylmethionine synthetase OS=Yersinia pestis... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6054 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone 58C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739667 ID=CK739667; Name=CK739667; organism=Citrus sinensis; type=EST; length=642bp
TAAGGTGGATAGGAGTGGTGCATACATTGTTAGGCAGGCTGCTAAGAGCA
TTGTTGCAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCC
ATTGGTGTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATATGGAACCGG
CAAGATTCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAAGCTTTGATT
TCAGGCCAGGAATGATGACCATCAATTTGGATCTCAAAAGGGGCGGTAAT
GGCAGGTTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGGGATGACCC
AGACTTCACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAG
CTTAAATTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTCAAGTTTGCT
TCTATTGGTAGTGGATGAATAATTTGAATATTATCTTGCTGCTGCTTTGT
AATACTAAGCAAATCTCCTGTGTTCAGAACTCATACATGTTCCCCATTCA
ATTCCTTTCTTTTTCTTCTTTCCCCACTTCTTTTTTGGTTTTGGTTTAAT
GTACCATGTCACCACTGTTGTGTAGTGATATCGATTGAGAATTTTGCTCA
ACTGGTGCCTGGAATTAGTAAAATTCTTCCTTTTGCTTACGA
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