CK739667

Overview
NameCK739667
Unique NameCK739667
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.286e-52
Identity = 102/117 (87.18%), Postives = 110/117 (94.02%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 352
            KVDRSGAY+ RQAAKSIVA+ LARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPG++TINL LKRGG  R+LKTAAYGHFGRDDPDFTWEVVKPL+ EKP A
Sbjct:  278 KVDRSGAYVARQAAKSIVASELARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGLITINLGLKRGGY-RYLKTAAYGHFGRDDPDFTWEVVKPLELEKPAA 393          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK2_HORVU (S-adenosylmethionine synthetase 2 OS=Hordeum vulgare GN=SAM2 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.286e-52
Identity = 99/117 (84.62%), Postives = 111/117 (94.87%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 352
            KVDRSGAYI RQAAKSI+A+GLARRCIVQ+SYAIGVPEPLSVFVDSYGTGKIPD+EILK+VKE+FDFRPGM++INLDLK+GG  RF+KTAAYGHFGRDD DFTWEVVKPLK++K  A
Sbjct:  279 KVDRSGAYIARQAAKSIIASGLARRCIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENFDFRPGMISINLDLKKGGK-RFIKTAAYGHFGRDDADFTWEVVKPLKFDKASA 394          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK_MESCR (S-adenosylmethionine synthetase OS=Mesembryanthemum crystallinum GN=METK PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.742e-52
Identity = 101/116 (87.07%), Postives = 107/116 (92.24%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 349
            KVDRSGAYI RQAAKSIVA GLARRCIVQ+SYAIGV EPLSVFVD+YGTGKI DK+ILKIVKE+FDFRPGM+  NLDL RGGN R+LKTAAYGHFGRDD DFTWEVVKPLKWEKPQ
Sbjct:  277 KVDRSGAYIARQAAKSIVAAGLARRCIVQISYAIGVAEPLSVFVDTYGTGKISDKDILKIVKETFDFRPGMIANNLDLLRGGN-RYLKTAAYGHFGRDDADFTWEVVKPLKWEKPQ 391          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK4_BRAJU (S-adenosylmethionine synthetase 4 OS=Brassica juncea GN=MSAMS4 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.089e-51
Identity = 97/111 (87.39%), Postives = 104/111 (93.69%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 334
            KVDRSGAYIVRQAAKS+VA GLARRCIVQVSYAIGVPEPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGMM INLDLKRGGN RF KTAAYGHFGRDDPDFTWEV+KPLK
Sbjct:  277 KVDRSGAYIVRQAAKSVVATGLARRCIVQVSYAIGVPEPLSVFVDTYKTGTIPDKDILVLIKEAFDFRPGMMAINLDLKRGGNFRFQKTAAYGHFGRDDPDFTWEVIKPLK 387          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK3_ARATH (S-adenosylmethionine synthetase 3 OS=Arabidopsis thaliana GN=METK3 PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.422e-51
Identity = 98/111 (88.29%), Postives = 104/111 (93.69%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 334
            KVDRSGAYIVRQAAKS+VA GLARRCIVQVSYAIGVPEPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGMM INLDLKRGGN RF KTAAYGHFGRDDPDFTWEVVKPLK
Sbjct:  277 KVDRSGAYIVRQAAKSVVAAGLARRCIVQVSYAIGVPEPLSVFVDTYKTGTIPDKDILVLIKEAFDFRPGMMAINLDLKRGGNFRFQKTAAYGHFGRDDPDFTWEVVKPLK 387          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK1_PICSI (S-adenosylmethionine synthetase 1 OS=Picea sitchensis GN=METK1 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.137e-51
Identity = 98/116 (84.48%), Postives = 107/116 (92.24%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTG--KIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 343
            KVDRSGAYIVRQAAKS+VA GLARRC+VQVSYAIGVPEPLSVFVD+YGTG  KI D EILK++KE+FDFRPGM++INLDLKRGGN RF KTAAYGHFGR+DPDFTWE VK LKWEK
Sbjct:  277 KVDRSGAYIVRQAAKSVVAAGLARRCLVQVSYAIGVPEPLSVFVDTYGTGTGKIQDAEILKLIKENFDFRPGMISINLDLKRGGNMRFQKTAAYGHFGREDPDFTWETVKVLKWEK 392          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 9.216e-51
Identity = 96/114 (84.21%), Postives = 107/114 (93.86%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 343
            KVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPDK+IL ++K++FDFRPGM++INLDLKRGGN RF KTAAYGHFGRDDPDF+WE VK LK EK
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILALIKKNFDFRPGMISINLDLKRGGNFRFQKTAAYGHFGRDDPDFSWETVKQLKPEK 390          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK3_VITVI (S-adenosylmethionine synthetase 3 OS=Vitis vinifera GN=METK3 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.053e-50
Identity = 95/111 (85.59%), Postives = 104/111 (93.69%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 334
            KVDRSGAYIVRQAAKS+VA+GLARRC+VQVSYAIGVPEPLSVFVD+Y TGKIPDK+IL ++KE+FDFRPGM+ INLDLKRGGN RF KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILDLIKENFDFRPGMIAINLDLKRGGNFRFQKTAAYGHFGRDDPDFTWETVKLLK 387          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK4_POPTR (S-adenosylmethionine synthetase 4 OS=Populus trichocarpa GN=METK4 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 7.802e-50
Identity = 93/111 (83.78%), Postives = 104/111 (93.69%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 334
            KVDRSGAYIVRQAAKS+VA+GLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPD++IL+++KE+FDFRPGM+ INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  277 KVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDRDILELIKENFDFRPGMIAINLDLMRGGNSRYQKTAAYGHFGRDDPDFTWETVKLLK 387          
BLAST of CK739667 vs. ExPASy Swiss-Prot
Match: METK2_ACTCH (S-adenosylmethionine synthetase 2 OS=Actinidia chinensis GN=SAM2 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.471e-48
Identity = 92/111 (82.88%), Postives = 102/111 (91.89%), Query Frame = 2
Query:    2 KVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 334
            KVDRSGAY+VRQAAKS+VA+GLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPDK+IL ++KE+FDFRPGM+ INLDLKRGGN R+ KTAAYGHFGRDD D TWE VK LK
Sbjct:  277 KVDRSGAYVVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILALIKENFDFRPGMIAINLDLKRGGNFRYQKTAAYGHFGRDDADLTWETVKILK 387          
The following BLAST results are available for this feature:
BLAST of CK739667 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_MUSAC1.286e-5287.18S-adenosylmethionine synthetase OS=Musa acuminata ... [more]
METK2_HORVU1.286e-5284.62S-adenosylmethionine synthetase 2 OS=Hordeum vulga... [more]
METK_MESCR3.742e-5287.07S-adenosylmethionine synthetase OS=Mesembryanthemu... [more]
METK4_BRAJU1.089e-5187.39S-adenosylmethionine synthetase 4 OS=Brassica junc... [more]
METK3_ARATH1.422e-5188.29S-adenosylmethionine synthetase 3 OS=Arabidopsis t... [more]
METK1_PICSI4.137e-5184.48S-adenosylmethionine synthetase 1 OS=Picea sitchen... [more]
METK1_VITVI9.216e-5184.21S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]
METK3_VITVI2.053e-5085.59S-adenosylmethionine synthetase 3 OS=Vitis vinifer... [more]
METK4_POPTR7.802e-5083.78S-adenosylmethionine synthetase 4 OS=Populus trich... [more]
METK2_ACTCH1.471e-4882.88S-adenosylmethionine synthetase 2 OS=Actinidia chi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6054 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone 58C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739667 ID=CK739667; Name=CK739667; organism=Citrus sinensis; type=EST; length=642bp
TAAGGTGGATAGGAGTGGTGCATACATTGTTAGGCAGGCTGCTAAGAGCA
TTGTTGCAAACGGGCTTGCTCGCAGGTGCATTGTCCAAGTCTCCTATGCC
ATTGGTGTGCCTGAGCCATTGTCTGTTTTTGTGGACTCATATGGAACCGG
CAAGATTCCTGACAAGGAGATCCTCAAAATTGTGAAGGAAAGCTTTGATT
TCAGGCCAGGAATGATGACCATCAATTTGGATCTCAAAAGGGGCGGTAAT
GGCAGGTTCTTGAAGACTGCTGCCTATGGACACTTTGGCAGGGATGACCC
AGACTTCACTTGGGAAGTTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAG
CTTAAATTTGAGTTGAAAAGTGAAAACTATCCCTGCTGTTCAAGTTTGCT
TCTATTGGTAGTGGATGAATAATTTGAATATTATCTTGCTGCTGCTTTGT
AATACTAAGCAAATCTCCTGTGTTCAGAACTCATACATGTTCCCCATTCA
ATTCCTTTCTTTTTCTTCTTTCCCCACTTCTTTTTTGGTTTTGGTTTAAT
GTACCATGTCACCACTGTTGTGTAGTGATATCGATTGAGAATTTTGCTCA
ACTGGTGCCTGGAATTAGTAAAATTCTTCCTTTTGCTTACGA
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