CK739695
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB28_PEA (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum GN=CAB8 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.344e-17 Identity = 54/117 (46.15%), Postives = 68/117 (58.12%), Query Frame = 3 Query: 54 GQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 G YLGNP V ++ I + + + VE R DP YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GPLENLA HL+DP +NN Sbjct: 144 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDP---LYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLSDPVNNN 256
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.344e-17 Identity = 55/126 (43.65%), Postives = 70/126 (55.56%), Query Frame = 3 Query: 18 WVHAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQRSMEK---DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 W A GG YLGNP V ++ I + + + VE R + E YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GP+ENL+ HLADP NN Sbjct: 130 WFKAGSQIFAEGG-LDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENLSDHLADPAVNN 253
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.344e-17 Identity = 54/117 (46.15%), Postives = 70/117 (59.83%), Query Frame = 3 Query: 54 GQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQRSMEK------DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 G YLGNP V ++ +I + + + VE R DP YPGG+FDPLG ++DP++ E KVKE+KNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 140 GGLDYLGNPSLVHAQSILSIWATQVILMGAVEGYRVAGGPLGEIVDP---LYPGGSFDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 252
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 4.344e-17 Identity = 55/117 (47.01%), Postives = 66/117 (56.41%), Query Frame = 3 Query: 54 GQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 G YLGNP + ++ I + + + FVE R DP YPGGAFDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GP+ENL HLADP NN Sbjct: 141 GGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPI---YPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLFDHLADPVANN 253
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.673e-17 Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 3 Query: 183 YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 YPGG+FDPLG + DP+ F E +VKEIKNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 190 YPGGSFDPLGLADDPEAFAELEVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 254
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB21_MAIZE (Chlorophyll a-b binding protein 1, chloroplastic OS=Zea mays GN=CAB1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 5.673e-17 Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = 3 Query: 183 YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 YPGG+FDPLG + DP+ F E KVKE+KNGRLA+ + GF V Q+ G GPLENLA H+ADP +NN Sbjct: 186 YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHIADPVNNN 250
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 9.677e-17 Identity = 41/66 (62.12%), Postives = 49/66 (74.24%), Query Frame = 3 Query: 183 YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 YPGG FDPLG + DP+ F + KVKE+KNGRLA+ + GF V Q+ G GPLENLA HLADP +NN Sbjct: 189 YPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLENLADHLADPVNNN 253
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 9.677e-17 Identity = 53/117 (45.30%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 54 GQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQR------SMEKDPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 G YLGNP V ++ I + + + +E R DP YPGG+FDPLG + DP+ F E KVKEIKNGRLA+ + GF V Q+ G GPL+NL HLADP +NN Sbjct: 143 GGLDYLGNPSLVHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVTDP---LYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLDNLVDHLADPVNNN 255
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 9.677e-17 Identity = 59/133 (44.36%), Postives = 72/133 (54.14%), Query Frame = 3 Query: 6 GLGNWVHAQEWAAVPGGQATYLGNP--VPWGTLPTILVIEFLSIAFVEHQRSMEK------DPEKKKYPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 G W A GG YLGNP V +L I + + + VE R DP YPGG+FDPLG ++ PQ F E KVKEIKNGRLA+ + GF V Q+ G GPLE+LA H+ADP +NN Sbjct: 127 GEAGWFKAGSQIFSDGG-LDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDP---LYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPLEDLADHIADPVNNN 254
BLAST of CK739695 vs. ExPASy Swiss-Prot
Match: CB2A_PINSY (Chlorophyll a-b binding protein type 2 member 1A, chloroplastic OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.264e-16 Identity = 42/66 (63.64%), Postives = 48/66 (72.73%), Query Frame = 3 Query: 183 YPGGAFDPLGFSKDPQKFEEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNN 380 YPGG FDPLG + DP F E KVKEIKNGRLA+ + GF V Q+ G GP+ENLA HLADP +NN Sbjct: 202 YPGGNFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFV-QAIVTGKGPIENLADHLADPVNNN 266 The following BLAST results are available for this feature:
BLAST of CK739695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739695 ID=CK739695; Name=CK739695; organism=Citrus sinensis; type=EST; length=524bpback to top |