CK739810
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.811e-11 Identity = 42/112 (37.50%), Postives = 60/112 (53.57%), Query Frame = 2 Query: 41 LFVLEMALMGFAEHRRFQDWANPGSMGRQYFLGFEK-YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 ++ ++ LMG E R G +G G + Y GG+ DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DH+ADPV NN Sbjct: 159 IWATQVVLMGLIEGYR----VGGGPLGE----GLDPLYPGGAFDPL----------GLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANN 252
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.671e-11 Identity = 30/52 (57.69%), Postives = 40/52 (76.92%), Query Frame = 2 Query: 218 DEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 D ++ + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHLADPV NN Sbjct: 87 DPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANN 138
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.671e-11 Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 149 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 Y GGS DP + ++ + K+KE+KNGRLAM ++ G+FVQ +VT GP ++L DH+ADPVNNN Sbjct: 190 YPGGSFDPL----------GLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNN 254
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.262e-11 Identity = 32/72 (44.44%), Postives = 43/72 (59.72%), Query Frame = 2 Query: 158 GSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 G G+ Y D + + K+KE+KNGRLAM ++ G+FVQ +VT GP +NLLDHL +PV NN Sbjct: 182 GEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANN 253
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.262e-11 Identity = 32/72 (44.44%), Postives = 42/72 (58.33%), Query Frame = 2 Query: 158 GSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 G G+ Y D + + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHL DPV NN Sbjct: 185 GEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANN 256
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB21_PEA (Chlorophyll a-b binding protein AB96 (Fragment) OS=Pisum sativum GN=AB96 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.262e-11 Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 2 Query: 149 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 Y GGS DP + ++ + K+KE+KNGRLAM ++ G+FV +VT GP +NL DHLADPVNNN Sbjct: 152 YPGGSFDPL----------GLAEVPEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNN 216
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.179e-11 Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 2 Query: 218 DEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 D + + K+KE+KNGRLAM A LG+FVQ +VT GP +NL DHLA+P NN Sbjct: 211 DPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENN 262
BLAST of CK739810 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.179e-11 Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 2 Query: 149 YLGGSGDPAYXXXXXXXXXXXXKDEKSMKDFKLKEVKNGRLAMLAILGYFVQGLVT*VGPYQNLLDHLADPVNNN 373 Y GGS DP D ++ + K+KE+KNGRLAM ++ G+FVQ +VT GP +NL DHLADP NN Sbjct: 189 YPGGSFDPL----------GLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNN 253 The following BLAST results are available for this feature:
BLAST of CK739810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739810 ID=CK739810; Name=CK739810; organism=Citrus sinensis; type=EST; length=529bpback to top |