CK739850

Overview
NameCK739850
Unique NameCK739850
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: TNI3K_RAT (Serine/threonine-protein kinase TNNI3K OS=Rattus norvegicus GN=Tnni3k PE=2 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 1.587e-18
Identity = 60/170 (35.29%), Postives = 96/170 (56.47%), Query Frame = 1
Query:  139 KLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHS--KKIVHRDVKTENMLLDANRTLKIADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMP 636
            +L+HP V +F+GA +       PSQ A              +V +Y+ GG+L   L   KR  L  +  + IA+D+A+G+ YLHS  + I+HRD+ + N+LL  +    +ADFG +R +++ +  +MT + G L +MAPEV      Y  K DV+S+ +CLWE+   ++P
Sbjct:  515 QLNHPCVVQFVGACLDD-----PSQFA--------------IVTQYISGGSLFSLLHEQKRI-LDLQSKLIIAVDVAKGMEYLHSLTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRYTIKADVFSYSLCLWELLTGEIP 664          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: TNI3K_MOUSE (Serine/threonine-protein kinase TNNI3K OS=Mus musculus GN=Tnni3k PE=2 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 1.587e-18
Identity = 60/170 (35.29%), Postives = 96/170 (56.47%), Query Frame = 1
Query:  139 KLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHS--KKIVHRDVKTENMLLDANRTLKIADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMP 636
            +L+HP V +F+GA +       PSQ A              +V +Y+ GG+L   L   KR  L  +  + IA+D+A+G+ YLHS  + I+HRD+ + N+LL  +    +ADFG +R +++ +  +MT + G L +MAPEV      Y  K DV+S+ +CLWE+   ++P
Sbjct:  514 QLNHPCVVQFVGACLDD-----PSQFA--------------IVTQYISGGSLFSLLHEQKRI-LDLQSKLIIAVDVAKGMEYLHSLTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRYTIKADVFSYALCLWELLIGEIP 663          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.072e-18
Identity = 50/126 (39.68%), Postives = 73/126 (57.94%), Query Frame = 1
Query:  262 VVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLH---SKKIVHRDVKTENMLLDANRTLKIADFGVARVE--AQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYC 624
            +V EY+  G LK  L  +    L++K  +++ +  ARGL YLH   S+ I+HRD+K+ N+LLD N   K+ADFG++R           TG  G+ GY+ PE    +    K DVYSFG+ L+E+ C
Sbjct:  560 LVYEYMDKGPLKSHLYGSTNPPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLSRSGPCIDETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLC 685          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: TNI3K_HUMAN (Serine/threonine-protein kinase TNNI3K OS=Homo sapiens GN=TNNI3K PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.072e-18
Identity = 60/170 (35.29%), Postives = 96/170 (56.47%), Query Frame = 1
Query:  139 KLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHS--KKIVHRDVKTENMLLDANRTLKIADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLDG-KPYNRKCDVYSFGICLWEIYCCDMP 636
            +L+HP V +F+GA +       PSQ A              +V +Y+ GG+L   L   KR  L  +  + IA+D+A+G+ YLH+  + I+HRD+ + N+LL  +    +ADFG +R +++ +  +MT + G L +MAPEV      Y  K DV+S+ +CLWEI   ++P
Sbjct:  616 QLNHPCVIQFVGACLND-----PSQFA--------------IVTQYISGGSLFSLLHEQKRI-LDLQSKLIIAVDVAKGMEYLHNLTQPIIHRDLNSHNILLYEDGHAVVADFGESRFLQSLDEDNMTKQPGNLRWMAPEVFTQCTRYTIKADVFSYALCLWEILTGEIP 765          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: NEK8_DANRE (Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.072e-18
Identity = 45/129 (34.88%), Postives = 80/129 (62.02%), Query Frame = 1
Query:  235 NSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHSKKIVHRDVKTENMLLDANRTL-KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 618
            N L  +A  + +EY PGGTL  ++ +     L    ++   + +   L ++H+K I+HRD+KT+N+LLD ++ + KI DFG++++     +  T   GT  Y++PE+ +GKPYN+K D+++ G  L+E+
Sbjct:   69 NFLEDKALMIAMEYAPGGTLADYIQKRCNSLLDEDTILHSFVQILLALYHVHNKLILHRDLKTQNILLDKHQMIVKIGDFGISKILVSKSKAYT-VVGTPCYISPELCEGKPYNQKSDIWALGCVLYEL 196          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: MLTK_HUMAN (Mitogen-activated protein kinase kinase kinase MLT OS=Homo sapiens GN=MLTK PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.072e-18
Identity = 45/128 (35.16%), Postives = 76/128 (59.38%), Query Frame = 1
Query:  262 VVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHSK---KIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMP 636
            +V EY   G+L  ++  N+ +++    ++  A D+A+G+ YLH +   K++HRD+K+ N+++ A+  LKI DFG +R    N        GT  +MAPEV+   P +  CD YS+G+ LWE+   ++P
Sbjct:   80 IVTEYASLGSLYDYINSNRSEEMDMDHIMTWATDVAKGMHYLHMEAPVKVIHRDLKSRNVVIAADGVLKICDFGASRFH--NHTTHMSLVGTFPWMAPEVIQSLPVSETCDTYSYGVVLWEMLTREVP 205          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: M313B_XENLA (Mitogen-activated protein kinase kinase kinase 13-B OS=Xenopus laevis GN=map3k13-B PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.072e-18
Identity = 52/167 (31.14%), Postives = 89/167 (53.29%), Query Frame = 1
Query:  136 QKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEIYCCDMP 636
            +KL HPN+  F G                        +   C+++EY   G L + L     +K+  K +++ +  +A G++YLH  KI+HRD+K+ N+L+    T+KI+DFG ++ E  +        GT+ +MAPEV+  +P + K D++SFG+ LWE+   ++P
Sbjct:  212 RKLKHPNIIAFKGVCT--------------------QAPCYCILMEYCAQGQLYEVL--RAGRKVTPKLLVEWSTGIASGMNYLHLHKIIHRDLKSPNVLVTHADTVKISDFGTSK-ELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVLLWELLTGEIP 355          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: MKK2_YEAST (MAP kinase kinase MKK2/SSP33 OS=Saccharomyces cerevisiae GN=MKK2 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.706e-18
Identity = 54/128 (42.19%), Postives = 80/128 (62.50%), Query Frame = 1
Query:  247 SRACCVVVEYLPG----GTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 618
            S +  + +EY+ G     T K  L R  R  ++ + + +IA  + RGLSYLH +K++HRD+K +N+LL+    +K+ DFGV+  EA N   MT  TGT  YMAPE + G+PY+  CDV+S G+ L E+
Sbjct:  285 SSSIYIAMEYMGGKSLEATYKNLLKRGGR--ISERVIGKIAESVLRGLSYLHERKVIHRDIKPQNILLNEKGEIKLCDFGVSG-EAVNSLAMT-FTGTSFYMAPERIQGQPYSVTCDVWSLGLTLLEV 408          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: LIMK2_HUMAN (LIM domain kinase 2 OS=Homo sapiens GN=LIMK2 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.706e-18
Identity = 61/183 (33.33%), Postives = 89/183 (48.63%), Query Frame = 1
Query:  130 VWQKLDHPNVTKFIGASMGTTNLKIPSQSATSDSHNSLPSRACCVVVEYLPGGTLKKFLIRNKRKKLAFKGVIQIALDLARGLSYLHSKKIVHRDVKTENMLLDANRTLKIADFGVAR--VEAQNPRDMTGET------------------GTLGYMAPEVLDGKPYNRKCDVYSFGICLWEI 618
            V + LDHPNV KFIG       L +                    + EY+ GGTLK FL         ++  ++ A  +A G++YLHS  I+HRD+ + N L+  ++T+ +ADFG++R  VE +    M   T                  G   +MAPE+L+GK Y+   D++SFGI L EI
Sbjct:  379 VMRSLDHPNVLKFIGVLYKDKKLNL--------------------LTEYIEGGTLKDFL--RSMDPFPWQQKVRFAKGIASGMAYLHSMCIIHRDLNSHNCLIKLDKTVVVADFGLSRLIVEERKRAPMEKATTKKRTLRKNDRKKRYTVVGNPYWMAPEMLNGKSYDETVDIFSFGIVLCEI 539          
BLAST of CK739850 vs. ExPASy Swiss-Prot
Match: KRAF1_CAEBR (Raf homolog serine/threonine-protein kinase OS=Caenorhabditis briggsae GN=lin-45 PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.706e-18
Identity = 49/134 (36.57%), Postives = 81/134 (60.45%), Query Frame = 1
Query:  262 VVVEYLPGGTLKKFL-IRNKRKKLAFKGVIQIALDLARGLSYLHSKKIVHRDVKTENM-LLDANRTLKIADFGVARVEAQ----NPRDMTGETGTLGYMAPEVL---DGKPYNRKCDVYSFGICLWEIYCCDMP 636
            ++ ++  G +L + + ++  R +     VI I   ++ G++YLHSK I+HRD+KT N+ L+D   T+KI DFG+A V+ +      +     TG++ +MAPEV+   D  PY  + DVYSFG+C++EI    +P
Sbjct:  549 IITQWCEGSSLYRHIHVQEPRVEFEMSAVIDILKQVSLGMNYLHSKNIIHRDLKTNNIFLMDDMSTVKIGDFGLATVKTKWTVNGGQQQQQPTGSILWMAPEVIRMQDDNPYTPQSDVYSFGVCMYEILSSHLP 682          
The following BLAST results are available for this feature:
BLAST of CK739850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TNI3K_RAT1.587e-1835.29Serine/threonine-protein kinase TNNI3K OS=Rattus n... [more]
TNI3K_MOUSE1.587e-1835.29Serine/threonine-protein kinase TNNI3K OS=Mus musc... [more]
Y5241_ARATH2.072e-1839.68Probable receptor-like protein kinase At5g24010 OS... [more]
TNI3K_HUMAN2.072e-1835.29Serine/threonine-protein kinase TNNI3K OS=Homo sap... [more]
NEK8_DANRE2.072e-1834.88Serine/threonine-protein kinase Nek8 OS=Danio reri... [more]
MLTK_HUMAN2.072e-1835.16Mitogen-activated protein kinase kinase kinase MLT... [more]
M313B_XENLA2.072e-1831.14Mitogen-activated protein kinase kinase kinase 13-... [more]
MKK2_YEAST2.706e-1842.19MAP kinase kinase MKK2/SSP33 OS=Saccharomyces cere... [more]
LIMK2_HUMAN2.706e-1833.33LIM domain kinase 2 OS=Homo sapiens GN=LIMK2 PE=1 ... [more]
KRAF1_CAEBR2.706e-1836.57Raf homolog serine/threonine-protein kinase OS=Cae... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6240 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739850 ID=CK739850; Name=CK739850; organism=Citrus sinensis; type=EST; length=639bp
GGACTGTGTACCGCGGCGCATATGATGGCCAAGATGTTGCAGTGAAGATA
TTGGATTGGGCGGAGGATGGGATGGTCACATCTGCTGAAGCTGCTGCAAT
TCGGGCATCATTTCGGCAAGAGGTGGCCTGTTTGGCAAAAGCTTGACCAT
CCAAACGTAACCAAATTTATTGGAGCTTCAATGGGAACAACCAATCTTAA
GATTCCTTCCCAAAGTGCTACGAGTGACAGCCATAATTCTCTTCCTTCCA
GGGCTTGCTGTGTTGTTGTTGAATACCTTCCAGGCGGGACATTGAAGAAA
TTTTTGATCAGGAACAAGAGGAAAAAACTTGCCTTTAAGGGTGTGATTCA
AATTGCTTTGGATCTTGCTAGAGGATTGAGCTATCTTCACTCAAAAAAGA
TTGTACATCGTGATGTTAAGACAGAAAACATGTTGCTAGATGCTAACAGA
ACTTTGAAAATTGCTGATTTTGGTGTTGCTCGAGTTGAAGCTCAGAATCC
AAGGGACATGACTGGGGAAACAGGAACTCTTGGGTACATGGCCCCAGAGG
TACTGGATGGGAAGCCTTACAATAGGAAATGCGATGTCTATAGCTTTGGG
ATATGCCTATGGGAAATCTACTGCTGCGATATGCCTTTA
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