CK739882
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS9_METVS (30S ribosomal protein S9P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps9p PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.243e-17 Identity = 48/115 (41.74%), Postives = 70/115 (60.87%), Query Frame = 3 Query: 12 GRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK--FGGRGARAR 350 G G I+IN P+EL+EP+ ++ K EP++L G +D+ + VKGGG SQ+ A R ++ KA++ F K E+K++ + YDRTLLV+D RR EP K +G RAR Sbjct: 22 GSGKIRINKKPLELMEPKYIKMKLMEPVILAGEI-LGSIDVDVDVKGGGTVSQMDAARTALGKAIIEF-------TGKMELKEMFLSYDRTLLVSDARRTEPHKPSKSSKGPRAR 128
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS9_METMP (30S ribosomal protein S9P OS=Methanococcus maripaludis GN=rps9p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.207e-16 Identity = 49/117 (41.88%), Postives = 71/117 (60.68%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK--FGGRGARAR 350 K G G I+IN P+EL+EP+ ++ K EP++L G + +D+ I VKGGG SQ+ A R ++ KA+V F K ++K+ + YDRTLLV+D RR EP K +G RA+ Sbjct: 20 KEGSGKIRINKKPLELMEPKYIKMKLMEPVILAG-EALSNIDVDIDVKGGGIVSQMDATRTALGKAIVEF-------TGKMDLKEKFLSYDRTLLVSDARRTEPHKPSKSSKGPRAK 128
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS9_META3 (30S ribosomal protein S9P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps9p PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.991e-16 Identity = 47/106 (44.34%), Postives = 63/106 (59.43%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK 323 K G+G I+IN PIE+VEP+ + K EPI+L G G+D+ I V GGG Q+ A R ++ KA+V F E+KD V YDRT+L++D RR EP K Sbjct: 20 KEGKGRIRINKKPIEIVEPKYINAKLMEPIILAG-DVVDGIDIDITVNGGGIVGQMDAARTALGKAIVEF-------TGDMELKDRFVHYDRTILISDARRTEPHK 117
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS9_THESM (30S ribosomal protein S9P OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rps9p PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.824e-16 Identity = 42/106 (39.62%), Postives = 63/106 (59.43%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKK 323 K G G +++N P+E++EPEI RF EP+++ G VD+ ++V+GGG Q A R +IA+ALV + +K+ ++YDRT+LV D RR EP K Sbjct: 28 KEGNGRVRVNYKPVEILEPEIARFTIMEPLVIAGEEILGKVDVDVKVEGGGFMGQAEAARIAIARALVEW-------TGDMNLKEKFMKYDRTMLVGDSRRTEPHK 126
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS9_PICTO (30S ribosomal protein S9P OS=Picrophilus torridus GN=rps9p PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.743e-15 Identity = 51/115 (44.35%), Postives = 70/115 (60.87%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARAR 350 ++G G ING PIEL EILR K EPI +LG R +D+ + V GGG+T Q A R ++AKA++ +++ D + EI+ YDR++LV D RR PKK G GARA+ Sbjct: 21 RKGSGKFLINGYPIELYPIEILREKMLEPIRILG-DRSKEIDIDVNVHGGGNTGQADATRTAMAKAIIEYFK---DSDLEAEIR----AYDRSMLVNDVRRKMPKKPMGYGARAK 127
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS9_PYRAE (30S ribosomal protein S9P OS=Pyrobaculum aerophilum GN=rps9p PE=3 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 2.277e-15 Identity = 47/115 (40.87%), Postives = 69/115 (60.00%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARAR 350 K G G ++ING P+EL E+ R K EP++L G VD+ + V GGG+ Q A+R ++A+ LVAF+Q +E+K++ RYD +L DPRR E KK G + AR++ Sbjct: 30 KPGIGRVRINGYPLELWPIEMARIKMSEPLILAGELA-KKVDIDVNVSGGGYMGQAVAVRIAMARGLVAFFQ-------SQELKELYERYDPYMLKGDPRRTEHKKPGIKHARSK 136
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS9_SULTO (30S ribosomal protein S9P OS=Sulfolobus tokodaii GN=rps9p PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.624e-15 Identity = 42/111 (37.84%), Postives = 65/111 (58.56%), Query Frame = 3 Query: 12 GRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGAR 344 G+G + +N P+E++ E++R K EP+LL G + +D +I V+GGG Q A R ++A+ALV F KE+++I YDRT+L DPR+ E +K+ AR Sbjct: 26 GKGRVFVNDIPLEIIPMEVVRMKIMEPLLLAGEKISSSIDAKIYVEGGGVMGQADAARMALARALVKF-------TGSKELEEIYKVYDRTMLAGDPRQTESEKWMRYSAR 129
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS9_SULAC (30S ribosomal protein S9P OS=Sulfolobus acidocaldarius GN=rps9p PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.517e-14 Identity = 42/113 (37.17%), Postives = 65/113 (57.52%), Query Frame = 3 Query: 6 KRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGAR 344 K G G + +N PIE++ E++R+K EP++L G + ++ RI +GGG Q A R ++A+ALV F + KE+ +I YDRT+L DPR+ E +K+ AR Sbjct: 25 KPGNGKVFVNDIPIEIIPIEVVRYKIMEPLVLAGDKITSSIEARIYTQGGGIMGQADAARMALARALVKF-------TNSKELVEIYKSYDRTMLAGDPRQTESEKWMRYSAR 130
BLAST of CK739882 vs. ExPASy Swiss-Prot
Match: RS9_SULSO (30S ribosomal protein S9P OS=Sulfolobus solfataricus GN=rps9p PE=3 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 1.249e-13 Identity = 43/111 (38.74%), Postives = 62/111 (55.86%), Query Frame = 3 Query: 12 GRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGAR 344 G+G + +N PIEL+ E++R K EP+LL G + +D +I GGG Q A R ++A+ALV F KE++ I YDRT+L DPR+ E +K+ AR Sbjct: 26 GKGRVFVNNVPIELIPIEMVRLKIMEPLLLAGNDIRSKIDAKIITYGGGIMGQADAARMALARALVKF-------TGSKELEKIYRAYDRTMLAGDPRQTESEKWMRYSAR 129 The following BLAST results are available for this feature:
BLAST of CK739882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739882 ID=CK739882; Name=CK739882; organism=Citrus sinensis; type=EST; length=354bpback to top |