CK739890

Overview
NameCK739890
Unique NameCK739890
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length428
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT2_WHEAT (ADP,ATP carrier protein 2, mitochondrial OS=Triticum aestivum GN=ANT-G2 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.724e-49
Identity = 84/102 (82.35%), Postives = 92/102 (90.20%), Query Frame = 2
Query:  122 KAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGE 427
            KA+K GG+RQFNGL+DVY+KTLKSDGIAGLYRGF+ISCVGIIVYRGLYFG+YDSLKPV+LT  +Q    ASF LGW IT GAGLASYPIDTVRRRMMMTSGE
Sbjct:  169 KASKGGGDRQFNGLVDVYRKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGLYDSLKPVLLTGTLQVCSFASFALGWLITNGAGLASYPIDTVRRRMMMTSGE 270          

HSP 2 Score: 42.743 bits (99), Expect = 5.724e-49
Identity = 18/33 (54.55%), Postives = 18/33 (54.55%), Query Frame = 3
Query:    3 DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYART 101
            DGYWKWF GN             FVYSLDY RT
Sbjct:  130 DGYWKWFGGNLASGGAAGASSLFFVYSLDYGRT 162          
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT_KLULA (ADP,ATP carrier protein OS=Kluyveromyces lactis GN=AAC PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.339e-47
Identity = 79/102 (77.45%), Postives = 92/102 (90.20%), Query Frame = 2
Query:  122 KAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGE 427
            K+AKKGGERQFNGL+DVYKKTL SDG+AGLYRGF  S VGI+VYRGLYFG+YDSLKP++LT  +++SFLASFLLGW +T GA  ASYP+DTVRRRMMMTSG+
Sbjct:  147 KSAKKGGERQFNGLVDVYKKTLASDGVAGLYRGFLPSVVGIVVYRGLYFGLYDSLKPLLLTGSLENSFLASFLLGWAVTTGASTASYPLDTVRRRMMMTSGQ 248          

HSP 2 Score: 38.891 bits (89), Expect = 2.339e-47
Identity = 18/33 (54.55%), Postives = 19/33 (57.58%), Query Frame = 3
Query:    3 DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYART 101
            +GY KWFAGN             FVYSLDYART
Sbjct:  108 EGYAKWFAGNLASGGLAGGLSLLFVYSLDYART 140          
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT_SCHPO (ADP,ATP carrier protein OS=Schizosaccharomyces pombe GN=anc1 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 6.744e-47
Identity = 76/102 (74.51%), Postives = 91/102 (89.22%), Query Frame = 2
Query:  122 KAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGE 427
            K+AKKGGERQFNGL+DVY+KT +SDG+ GLYRGF  S VGI+VYRGLYFGMYD+LKPVVL   ++ +FLASFLLGW +T G+G+ASYP+DT+RRRMMMTSGE
Sbjct:  165 KSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVGPLEGNFLASFLLGWAVTTGSGVASYPLDTIRRRMMMTSGE 266          

HSP 2 Score: 40.4318 bits (93), Expect = 6.744e-47
Identity = 19/33 (57.58%), Postives = 19/33 (57.58%), Query Frame = 3
Query:    3 DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYART 101
            DGY KWFAGN             FVYSLDYART
Sbjct:  126 DGYAKWFAGNLASGGAAGAASLLFVYSLDYART 158          
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT_NEUCR (ADP,ATP carrier protein OS=Neurospora crassa GN=acp PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.146e-46
Identity = 74/102 (72.55%), Postives = 90/102 (88.24%), Query Frame = 2
Query:  122 KAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGE 427
            K+AKKGGERQFNGL+DVY+KT+ SDGIAGLYRGF  S  GI+VYRGLYFG+YDS+KPV+L   ++++FLASF LGW +T  AG+ASYP+DT+RRRMMMTSGE
Sbjct:  151 KSAKKGGERQFNGLVDVYRKTIASDGIAGLYRGFGPSVAGIVVYRGLYFGLYDSIKPVLLVGDLKNNFLASFALGWCVTTAAGIASYPLDTIRRRMMMTSGE 252          

HSP 2 Score: 43.5134 bits (101), Expect = 1.146e-46
Identity = 19/33 (57.58%), Postives = 19/33 (57.58%), Query Frame = 3
Query:    3 DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYART 101
            DGYWKW AGN             FVYSLDYART
Sbjct:  112 DGYWKWMAGNLASGGAAGATSLLFVYSLDYART 144          
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT2_YEAST (ADP,ATP carrier protein 2 OS=Saccharomyces cerevisiae GN=AAC2 PE=1 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.946e-46
Identity = 79/102 (77.45%), Postives = 90/102 (88.24%), Query Frame = 2
Query:  122 KAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGE 427
            K++KKGG RQFNGLIDVYKKTLKSDG+AGLYRGF  S VGI+VYRGLYFGMYDSLKP++LT  ++ SFLASFLLGW +T GA   SYP+DTVRRRMMMTSG+
Sbjct:  160 KSSKKGGARQFNGLIDVYKKTLKSDGVAGLYRGFLPSVVGIVVYRGLYFGMYDSLKPLLLTGSLEGSFLASFLLGWVVTTGASTCSYPLDTVRRRMMMTSGQ 261          

HSP 2 Score: 38.891 bits (89), Expect = 1.946e-46
Identity = 18/33 (54.55%), Postives = 19/33 (57.58%), Query Frame = 3
Query:    3 DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYART 101
            +GY KWFAGN             FVYSLDYART
Sbjct:  121 EGYAKWFAGNLASGGAAGALSLLFVYSLDYART 153          
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT3_YEAST (ADP,ATP carrier protein 3 OS=Saccharomyces cerevisiae GN=AAC3 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 2.111e-45
Identity = 79/102 (77.45%), Postives = 88/102 (86.27%), Query Frame = 2
Query:  122 KAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGE 427
            K++KKGG RQFNGL DVYKKTLKSDGIAGLYRGF  S VGI+VYRGLYFGM+DSLKP+VLT  +  SFLASFLLGW +T GA   SYP+DTVRRRMMMTSG+
Sbjct:  149 KSSKKGGARQFNGLTDVYKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFGMFDSLKPLVLTGSLDGSFLASFLLGWVVTTGASTCSYPLDTVRRRMMMTSGQ 250          

HSP 2 Score: 37.7354 bits (86), Expect = 2.111e-45
Identity = 17/33 (51.52%), Postives = 19/33 (57.58%), Query Frame = 3
Query:    3 DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYART 101
            +GY KWFAGN             FVYSLD+ART
Sbjct:  110 EGYGKWFAGNLASGGAAGALSLLFVYSLDFART 142          
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT1_YEAST (ADP,ATP carrier protein 1 OS=Saccharomyces cerevisiae GN=AAC1 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.212e-43
Identity = 72/102 (70.59%), Postives = 87/102 (85.29%), Query Frame = 2
Query:  122 KAAKKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGE 427
            + +K   +RQFNGL+DVYKKTLK+DG+ GLYRGF  S +GIIVYRGLYFG+YDS KPV+LT  ++ SF+ASFLLGW IT+GA  ASYP+DTVRRRMMMTSG+
Sbjct:  151 RGSKSTSQRQFNGLLDVYKKTLKTDGLLGLYRGFVPSVLGIIVYRGLYFGLYDSFKPVLLTGALEGSFVASFLLGWVITMGASTASYPLDTVRRRMMMTSGQ 252          

HSP 2 Score: 40.4318 bits (93), Expect = 4.212e-43
Identity = 19/33 (57.58%), Postives = 19/33 (57.58%), Query Frame = 3
Query:    3 DGYWKWFAGNXXXXXXXXXXXXXFVYSLDYART 101
            DGY KWFAGN             FVYSLDYART
Sbjct:  112 DGYAKWFAGNLFSGGAAGGLSLLFVYSLDYART 144          
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT1_ANOGA (ADP,ATP carrier protein 1 OS=Anopheles gambiae GN=AGAP006782 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 1.090e-26
Identity = 53/95 (55.79%), Postives = 67/95 (70.53%), Query Frame = 2
Query:  140 GERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSG 424
            GER+FNGL+D  KKT+KSDGI GLYRGF++S  GII+YR  YFG +D+ K  +L D    S   S+ +   +T  +G+ SYP DTVRRRMMM SG
Sbjct:  152 GEREFNGLLDCLKKTVKSDGIIGLYRGFNVSVQGIIIYRAAYFGCFDTAKG-MLPDPKNTSIFVSWAIAQVVTTASGIISYPFDTVRRRMMMQSG 245          

HSP 2 Score: 31.187 bits (69), Expect = 1.090e-26
Identity = 13/34 (38.24%), Postives = 17/34 (50.00%), Query Frame = 3
Query:    9 YWKWFAGNXXXXXXXXXXXXXFVYSLDYARTPFG 110
            +W++F GN             FVY LD+ART  G
Sbjct:  111 FWRYFLGNLGSGGAAGATSLCFVYPLDFARTRLG 144          
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT1_RAT (ADP/ATP translocase 1 OS=Rattus norvegicus GN=Slc25a4 PE=1 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 1.981e-25
Identity = 51/98 (52.04%), Postives = 65/98 (66.33%), Query Frame = 2
Query:  131 KKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSG 424
            K   +R+FNGL D   K  KSDG+ GLY+GFS+S  GII+YR  YFG+YD+ K  +L D      + S+++   +T  AGL SYP DTVRRRMMM SG
Sbjct:  147 KGSSQREFNGLGDCLTKIFKSDGLKGLYQGFSVSVQGIIIYRAAYFGVYDTAKG-MLPDPKNVHIIVSWMIAQSVTAVAGLVSYPFDTVRRRMMMQSG 243          

HSP 2 Score: 33.8834 bits (76), Expect = 1.981e-25
Identity = 19/48 (39.58%), Postives = 23/48 (47.92%), Query Frame = 3
Query:    9 YWKWFAGNXXXXXXXXXXXXXFVYSLDYARTPFGK*CLRQLKRVGKGS 152
            +W++FAGN             FVY LD+ART       R    VGKGS
Sbjct:  109 FWRYFAGNLASGGAAGATSLCFVYPLDFART-------RLAADVGKGS 149          
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT1_MOUSE (ADP/ATP translocase 1 OS=Mus musculus GN=Slc25a4 PE=1 SV=4)

HSP 1 Score: 101.293 bits (251), Expect = 1.981e-25
Identity = 51/98 (52.04%), Postives = 65/98 (66.33%), Query Frame = 2
Query:  131 KKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSG 424
            K   +R+FNGL D   K  KSDG+ GLY+GFS+S  GII+YR  YFG+YD+ K  +L D      + S+++   +T  AGL SYP DTVRRRMMM SG
Sbjct:  147 KGSSQREFNGLGDCLTKIFKSDGLKGLYQGFSVSVQGIIIYRAAYFGVYDTAKG-MLPDPKNVHIIVSWMIAQSVTAVAGLVSYPFDTVRRRMMMQSG 243          

HSP 2 Score: 33.8834 bits (76), Expect = 1.981e-25
Identity = 19/48 (39.58%), Postives = 23/48 (47.92%), Query Frame = 3
Query:    9 YWKWFAGNXXXXXXXXXXXXXFVYSLDYARTPFGK*CLRQLKRVGKGS 152
            +W++FAGN             FVY LD+ART       R    VGKGS
Sbjct:  109 FWRYFAGNLASGGAAGATSLCFVYPLDFART-------RLAADVGKGS 149          
The following BLAST results are available for this feature:
BLAST of CK739890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ADT2_WHEAT5.724e-4982.35ADP,ATP carrier protein 2, mitochondrial OS=Tritic... [more]
ADT_KLULA2.339e-4777.45ADP,ATP carrier protein OS=Kluyveromyces lactis GN... [more]
ADT_SCHPO6.744e-4774.51ADP,ATP carrier protein OS=Schizosaccharomyces pom... [more]
ADT_NEUCR1.146e-4672.55ADP,ATP carrier protein OS=Neurospora crassa GN=ac... [more]
ADT2_YEAST1.946e-4677.45ADP,ATP carrier protein 2 OS=Saccharomyces cerevis... [more]
ADT3_YEAST2.111e-4577.45ADP,ATP carrier protein 3 OS=Saccharomyces cerevis... [more]
ADT1_YEAST4.212e-4370.59ADP,ATP carrier protein 1 OS=Saccharomyces cerevis... [more]
ADT1_ANOGA1.090e-2655.79ADP,ATP carrier protein 1 OS=Anopheles gambiae GN=... [more]
ADT1_RAT1.981e-2552.04ADP/ATP translocase 1 OS=Rattus norvegicus GN=Slc2... [more]
ADT1_MOUSE1.981e-2552.04ADP/ATP translocase 1 OS=Mus musculus GN=Slc25a4 P... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6282 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739890 ID=CK739890; Name=CK739890; organism=Citrus sinensis; type=EST; length=428bp
GAGATGGCTACTGGAAGTGGTTTGCTGGGAACTTGGCATCTGGTGGGGCT
GCTGGTGCTTCATCGCTTCTTTTTGTGTATTCGCTTGACTATGCAAGAAC
ACCGTTTGGCAAATGATGCCTAAGGCAGCTAAAAAGGGTGGGGAAAGGCA
GTTTAATGGTTTGATTGATGTCTACAAGAAGACTCTGAAATCTGATGGCA
TTGCTGGGCTCTACCGTGGATTCAGCATCTCATGTGTTGGAATTATAGTG
TATCGTGGGCTCTACTTTGGAATGTATGATTCTCTGAAACCTGTGGTGTT
GACTGATGGGATGCAGGATAGTTTCTTGGCTAGCTTCTTACTTGGCTGGG
GAATCACAATTGGTGCTGGTTTGGCTTCTTACCCAATTGATACAGTGCGT
AGAAGGATGATGATGACCTCTGGAGAAG
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