CK739890

Overview
NameCK739890
Unique NameCK739890
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length428
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT2_TACAC (ADP/ATP translocase 2 OS=Tachyglossus aculeatus aculeatus GN=SLC25A5 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 6.088e-24
Identity = 51/98 (52.04%), Postives = 63/98 (64.29%), Query Frame = 2 
Query:  131 KKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSG 424
            K G  R+F GL D   K  KSDGI GLY+GF++S  GII+YR  YFG+YD+ K  +L D        S+++   +T  AGL SYP DTVRRRMMM SG
Sbjct:  147 KAGDAREFKGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAKG-MLPDPKNTHIFISWMIAQSVTAVAGLTSYPFDTVRRRMMMQSG 243

HSP 2 Score: 31.5722 bits (70), Expect = 6.088e-24
Identity = 13/31 (41.94%), Postives = 17/31 (54.84%), Query Frame = 3 
Query:    9 YWKWFAGNXXXXXXXXXXXXXFVYSLDYART 101
            +W++FAGN             FVY LD+ART
Sbjct:  109 FWRYFAGNLASGGAAGATSLCFVYPLDFART 139
[Close]
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT_DROME (ADP,ATP carrier protein OS=Drosophila melanogaster GN=sesB PE=2 SV=4)

HSP 1 Score: 98.2117 bits (243), Expect = 7.916e-24
Identity = 50/97 (51.55%), Postives = 62/97 (63.92%), Query Frame = 2 
Query:  134 KGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSG 424
            KGG+R+F GL +   K  KSDGI GLYRGF +S  GII+YR  YFG YD+ +  +L D        S+ +   +T  AG+ SYP DTVRRRMMM SG
Sbjct:  162 KGGQREFTGLGNCLTKIFKSDGIVGLYRGFGVSVQGIIIYRAAYFGFYDTARG-MLPDPKNTPIYISWAIAQVVTTVAGIVSYPFDTVRRRMMMQSG 257

HSP 2 Score: 31.5722 bits (70), Expect = 7.916e-24
Identity = 13/31 (41.94%), Postives = 17/31 (54.84%), Query Frame = 3 
Query:    9 YWKWFAGNXXXXXXXXXXXXXFVYSLDYART 101
            +W++FAGN             FVY LD+ART
Sbjct:  124 FWRYFAGNLASGGAAGATSLCFVYPLDFART 154
[Close]
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT1_HUMAN (ADP/ATP translocase 1 OS=Homo sapiens GN=SLC25A4 PE=1 SV=4)

HSP 1 Score: 96.6709 bits (239), Expect = 1.031e-23
Identity = 49/98 (50.00%), Postives = 64/98 (65.31%), Query Frame = 2 
Query:  131 KKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSG 424
            K   +R+F+GL D   K  KSDG+ GLY+GF++S  GII+YR  YFG+YD+ K  +L D        S+++   +T  AGL SYP DTVRRRMMM SG
Sbjct:  147 KGAAQREFHGLGDCIIKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKG-MLPDPKNVHIFVSWMIAQSVTAVAGLVSYPFDTVRRRMMMQSG 243

HSP 2 Score: 32.7278 bits (73), Expect = 1.031e-23
Identity = 18/48 (37.50%), Postives = 23/48 (47.92%), Query Frame = 3 
Query:    9 YWKWFAGNXXXXXXXXXXXXXFVYSLDYARTPFGK*CLRQLKRVGKGS 152
            +W++FAGN             FVY LD+ART       R    VGKG+
Sbjct:  109 FWRYFAGNLASGGAAGATSLCFVYPLDFART-------RLAADVGKGA 149
[Close]
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT4_MOUSE (ADP/ATP translocase 4 OS=Mus musculus GN=Slc25a31 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.744e-23
Identity = 51/95 (53.68%), Postives = 64/95 (67.37%), Query Frame = 2 
Query:  143 ERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSGE 427
            +RQF GL D   K  KSDG+ GLY+GF +S  GIIVYR  YFG YD++K  +L    +  FL SF++   +T  +G+ SYP DTVRRRMMM SGE
Sbjct:  164 QRQFTGLGDCIMKIAKSDGLIGLYQGFGVSVQGIIVYRASYFGAYDTVKG-LLPKPKETPFLVSFIIAQIVTTCSGILSYPFDTVRRRMMMQSGE 257

HSP 2 Score: 29.6462 bits (65), Expect = 1.744e-23
Identity = 12/34 (35.29%), Postives = 15/34 (44.12%), Query Frame = 3 
Query:    9 YWKWFAGNXXXXXXXXXXXXXFVYSLDYARTPFG 110
            +W+WF  N              VY LD+ART  G
Sbjct:  122 FWRWFLANLASGGAAGATSLCVVYPLDFARTRLG 155
[Close]
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT1_RABIT (ADP/ATP translocase 1 OS=Oryctolagus cuniculus GN=SLC25A4 PE=2 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 2.272e-23
Identity = 48/98 (48.98%), Postives = 65/98 (66.33%), Query Frame = 2 
Query:  131 KKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSG 424
            K   +R+F+GL +   K  KSDG+ GLY+GF++S  GII+YR  YFG+YD+ K  +L D      + S+++   +T  AGL SYP DTVRRRMMM SG
Sbjct:  147 KGAAQREFSGLGNCLTKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKG-MLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSG 243

HSP 2 Score: 32.7278 bits (73), Expect = 2.272e-23
Identity = 18/48 (37.50%), Postives = 23/48 (47.92%), Query Frame = 3 
Query:    9 YWKWFAGNXXXXXXXXXXXXXFVYSLDYARTPFGK*CLRQLKRVGKGS 152
            +W++FAGN             FVY LD+ART       R    VGKG+
Sbjct:  109 FWRYFAGNLASGGAAGATSLCFVYPLDFART-------RLAADVGKGA 149
[Close]
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT1_BOVIN (ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 2.956e-23
Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 2 
Query:  131 KKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSG 424
            K   +R+F GL +   K  KSDG+ GLY+GF++S  GII+YR  YFG+YD+ K  +L D      + S+++   +T  AGL SYP DTVRRRMMM SG
Sbjct:  147 KGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKG-MLPDPKNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSG 243

HSP 2 Score: 32.7278 bits (73), Expect = 2.956e-23
Identity = 18/48 (37.50%), Postives = 23/48 (47.92%), Query Frame = 3 
Query:    9 YWKWFAGNXXXXXXXXXXXXXFVYSLDYARTPFGK*CLRQLKRVGKGS 152
            +W++FAGN             FVY LD+ART       R    VGKG+
Sbjct:  109 FWRYFAGNLASGGAAGATSLCFVYPLDFART-------RLAADVGKGA 149
[Close]
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT3_PIG (ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 1.434e-22
Identity = 49/98 (50.00%), Postives = 63/98 (64.29%), Query Frame = 2 
Query:  131 KKGGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSG 424
            K   ER+F GL D   K  KSDGI GLY+GF++S  GII+YR  YFG+Y + K  +L D      + S+++   +T  AG+ SYP DTVRRRMMM SG
Sbjct:  147 KSATEREFKGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIYRAAYFGVYGTAKG-MLPDPRNTHIVVSWMIAQTVTAVAGVFSYPFDTVRRRMMMQSG 243

HSP 2 Score: 31.5722 bits (70), Expect = 1.434e-22
Identity = 13/31 (41.94%), Postives = 17/31 (54.84%), Query Frame = 3 
Query:    9 YWKWFAGNXXXXXXXXXXXXXFVYSLDYART 101
            +W++FAGN             FVY LD+ART
Sbjct:  109 FWRYFAGNLASGGAAGATSLCFVYPLDFART 139
[Close]
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT_CHLKE (ADP,ATP carrier protein OS=Chlorella kessleri PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.862e-22
Identity = 48/96 (50.00%), Postives = 62/96 (64.58%), Query Frame = 2 
Query:  137 GGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSG 424
            G  R+F GL+D   K +K  G   LY+GF +S  GIIVYRG YFG+YD+ K V+  D    +F A + +   +T GAG+ SYP DTVRRR+MM SG
Sbjct:  182 GKSREFTGLVDCLSKVVKRGGPMALYQGFGVSVQGIIVYRGAYFGLYDTAKGVLFKDERTANFFAKWAVAQAVTAGAGVLSYPFDTVRRRLMMQSG 277

HSP 2 Score: 23.8682 bits (50), Expect = 1.862e-22
Identity = 10/31 (32.26%), Postives = 14/31 (45.16%), Query Frame = 3 
Query:    9 YWKWFAGNXXXXXXXXXXXXXFVYSLDYART 101
            +W++F  N              VY LD+ART
Sbjct:  143 FWRFFVVNLASGGLAGAGSLLIVYPLDFART 173
[Close]
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT2_ANOGA (ADP,ATP carrier protein 2 OS=Anopheles gambiae GN=AGAP002358 PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 4.677e-20
Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 2 
Query:  134 KGGE-RQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGITIGAGLASYPIDTVRRRMMMTSG 424
            KG E R+F GL D   K  K+DG+ GLYRGF +S  GII+YR  YFG YD+ +  +L +     +  S+ +   +T  AG+ SYP DTVRRRMMM SG
Sbjct:  149 KGAEAREFKGLGDCISKIFKTDGLVGLYRGFGVSVQGIIIYRAAYFGFYDTARG-MLPNPKTTPWYVSWAIAQCVTTVAGIVSYPFDTVRRRMMMQSG 245

HSP 2 Score: 25.7942 bits (55), Expect = 4.677e-20
Identity = 16/48 (33.33%), Postives = 21/48 (43.75%), Query Frame = 3 
Query:    9 YWKWFAGNXXXXXXXXXXXXXFVYSLDYARTPFGK*CLRQLKRVGKGS 152
            + ++F GN             FVY LD+ART       R    VGKG+
Sbjct:  111 FTRYFIGNLASGGMAGATSLCFVYPLDFART-------RLAADVGKGA 151
[Close]
BLAST of CK739890 vs. ExPASy Swiss-Prot
Match: ADT_DICDI (Mitochondrial substrate carrier family protein ancA OS=Dictyostelium discoideum GN=ancA PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.943e-19
Identity = 49/100 (49.00%), Postives = 60/100 (60.00%), Query Frame = 2 
Query:  137 GGERQFNGLIDVYKKTLKSDGIAGLYRGFSISCVGIIVYRGLYFGMYDSLKPVVLTDGMQDSFLASFLLGWGI----TIGAGLASYPIDTVRRRMMMTSG 424
            G  RQF GL +      K DG+ GLYRGF +S  GI VYR  +FG YD+ K ++L +  +    ASF   WGI    T  AG+ SYP DTVRRRMMM +G
Sbjct:  151 GSARQFTGLGNCISSIYKRDGLIGLYRGFGVSVGGIFVYRAAFFGGYDTAKGILLGENNKK---ASFWASWGIAQVVTTIAGVVSYPFDTVRRRMMMQAG 247

HSP 2 Score: 25.0238 bits (53), Expect = 2.943e-19
Identity = 12/29 (41.38%), Postives = 14/29 (48.28%), Query Frame = 3 
Query:   15 KWFAGNXXXXXXXXXXXXXFVYSLDYART 101
            K+F GN             FVY LD+ART
Sbjct:  114 KFFIGNLLSGGAAGATSLLFVYPLDFART 142
The following BLAST results are available for this feature:
BLAST of CK739890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
ADT2_TACAC6.088e-2452.04ADP/ATP translocase 2 OS=Tachyglossus aculeatus ac... [more]
ADT_DROME7.916e-2451.55ADP,ATP carrier protein OS=Drosophila melanogaster... [more]
ADT1_HUMAN1.031e-2350.00ADP/ATP translocase 1 OS=Homo sapiens GN=SLC25A4 P... [more]
ADT4_MOUSE1.744e-2353.68ADP/ATP translocase 4 OS=Mus musculus GN=Slc25a31 ... [more]
ADT1_RABIT2.272e-2348.98ADP/ATP translocase 1 OS=Oryctolagus cuniculus GN=... [more]
ADT1_BOVIN2.956e-2348.98ADP/ATP translocase 1 OS=Bos taurus GN=SLC25A4 PE=... [more]
ADT3_PIG1.434e-2250.00ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=... [more]
ADT_CHLKE1.862e-2250.00ADP,ATP carrier protein OS=Chlorella kessleri PE=3... [more]
ADT2_ANOGA4.677e-2048.98ADP,ATP carrier protein 2 OS=Anopheles gambiae GN=... [more]
ADT_DICDI2.943e-1949.00Mitochondrial substrate carrier family protein anc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_6282 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739890 ID=CK739890; Name=CK739890; organism=Citrus sinensis; type=EST; length=428bp
GAGATGGCTACTGGAAGTGGTTTGCTGGGAACTTGGCATCTGGTGGGGCT
GCTGGTGCTTCATCGCTTCTTTTTGTGTATTCGCTTGACTATGCAAGAAC
ACCGTTTGGCAAATGATGCCTAAGGCAGCTAAAAAGGGTGGGGAAAGGCA
GTTTAATGGTTTGATTGATGTCTACAAGAAGACTCTGAAATCTGATGGCA
TTGCTGGGCTCTACCGTGGATTCAGCATCTCATGTGTTGGAATTATAGTG
TATCGTGGGCTCTACTTTGGAATGTATGATTCTCTGAAACCTGTGGTGTT
GACTGATGGGATGCAGGATAGTTTCTTGGCTAGCTTCTTACTTGGCTGGG
GAATCACAATTGGTGCTGGTTTGGCTTCTTACCCAATTGATACAGTGCGT
AGAAGGATGATGATGACCTCTGGAGAAG
back to top