CK740113

Overview
NameCK740113
Unique NameCK740113
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK740113 vs. ExPASy Swiss-Prot
Match: ANXA4_HUMAN (Annexin A4 OS=Homo sapiens GN=ANXA4 PE=1 SV=4)

HSP 1 Score: 67.3958 bits (163), Expect = 7.672e-11
Identity = 40/130 (30.77%), Postives = 67/130 (51.54%), Query Frame = 2 
Query:    2 RNAAQRKLIRQTYADTYGEDLLKSLDKELTNDFERVVMLWTLDPAERDAFLANEATKRWTSSNQVLMEIACTRSSKQLLEARQAYHARFKKSLEEDVGYHTNGDFRKLLLPLVTAYRYEGDEVNITLANQ 391
            RN AQR+ IR  Y  T G DL+  L  EL+ +FE+V++         D      A K   +    L+EI  +R+ +++    Q Y  ++ +SLE+D+   T+  F+++L+ L    R EG+ ++  L  Q
Sbjct:   44 RNTAQRQEIRTAYKSTIGRDLIDDLKSELSGNFEQVIVGMMTPTVLYDVQELRRAMKGAGTDEGCLIEILASRTPEEIRRISQTYQQQYGRSLEDDIRSDTSFMFQRVLVSLSAGGRDEGNYLDDALVRQ 173
The following BLAST results are available for this feature:
BLAST of CK740113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
ANXA4_HUMAN7.672e-1130.77Annexin A4 OS=Homo sapiens GN=ANXA4 PE=1 SV=4[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6607 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65E12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740113 ID=CK740113; Name=CK740113; organism=Citrus sinensis; type=EST; length=667bp
CAGAAATGCTGCTCAACGCAAGTTGATTCGACAAACATATGCTGATACTT
ACGGCGAAGACCTCCTCAAGTCGCTCGACAAGGAACTCACTAATGACTTT
GAGAGGGTGGTGATGCTCTGGACTCTTGATCCTGCTGAACGTGATGCGTT
TTTGGCTAATGAAGCCACTAAGAGGTGGACTTCTAGCAACCAGGTTCTTA
TGGAAATTGCATGCACCAGGTCTTCGAAGCAATTGCTCGAAGCAAGGCAG
GCTTATCATGCTCGTTTTAAGAAGTCCCTTGAAGAGGATGTTGGTTATCA
CACCAATGGGGACTTCCGCAAGCTTTTGCTACCCCTTGTGACTGCCTACC
GATATGAGGGTGATGAGGTGAACATTACACTTGCAAATCAGAAGCTAAGA
TTCTCCATGAGAAGATTTCTAATAAGGCTTACAATGATGAGGATCTCATC
AGGATCTTGGCTACAGGAGCAAGCACAGATCAATGCGACTCTGAATCAAT
ACAAGAATGTATATGGGGAATGATATTGATCAGGACTTAGAGGCTGACCC
TAAAGATGAGTACCTCGACCTACTGAGGGCCACAGTTCAGTGCTTAGTCC
GCCCTGAACATTATTTTGAGAAGATACTTCTCTGGCATTAACAAACAGGG
AACAGATGAAGGGCTCT
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