CK740134

Overview
NameCK740134
Unique NameCK740134
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_PICTO (50S ribosomal protein L14P OS=Picrophilus torridus GN=rpl14p PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.563e-30
Identity = 61/115 (53.04%), Postives = 85/115 (73.91%), Query Frame = 1
Query:   79 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 423
            + C DNTGAK + +I VK +     R+P+A VGDM +A+VKKG P++R KV+ AV+VRQR+P+RR DG  + FEDNA V+V P GE++GS I GP+ +E A+ WPRIA+ ++ IV
Sbjct:   18 IPCVDNTGAKMISLIDVKALHTVAKRIPAAGVGDMFIASVKKGTPEMRSKVVYAVVVRQRRPYRRADGTMIEFEDNAAVLVTPDGEVRGSEIKGPVAREAAERWPRIAAISSTIV 132          
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_METS5 (50S ribosomal protein L14P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl14p PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.041e-30
Identity = 63/115 (54.78%), Postives = 84/115 (73.04%), Query Frame = 1
Query:   79 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 423
            VN +DN+GAK   IISV G +G L R+P A VGD+VM +V+KG PD+RK+   AV++RQR P+RR DG ++ F+DNA VIVNP G  KG+ I GP+ +E A+ WP++AS A  IV
Sbjct:   24 VNVSDNSGAKEAMIISVFGYRGALRRVPYANVGDLVMVSVRKGAPDVRKQKFKAVVIRQRMPFRRPDGTWISFDDNAVVIVNPDGTAKGTEIRGPVAREAAERWPKVASLATLIV 138          
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_METS3 (50S ribosomal protein L14P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl14p PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 4.548e-30
Identity = 61/115 (53.04%), Postives = 85/115 (73.91%), Query Frame = 1
Query:   79 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 423
            + C DNTGA+ + IISVKG KG   RL  A VGD+V+A+VKKG  D+R++V+ AV++RQ+K + R DG+ + FEDNA VI+ P+G +KGS + GP+ KE AD WP + SAA+ +V
Sbjct:   18 LQCVDNTGAREIQIISVKGFKGVRRRLDVAGVGDLVVASVKKGTADMRREVVNAVVIRQKKEYMRADGLRVKFEDNAAVIITPEGILKGSEVRGPVAKEAADRWPSVGSAASILV 132          
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_METVS (50S ribosomal protein L14P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl14p PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.939e-30
Identity = 61/112 (54.46%), Postives = 81/112 (72.32%), Query Frame = 1
Query:   85 CADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 420
            CADNTGAK L +I+VK   G + RLPSA VG +V  +VKKG P++RK+V+PA+I+RQ+K ++R DG  + FEDNA VIV P+G  KGS I GP+ KE A+ WP ++  A  I
Sbjct:   20 CADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPVSKEAAERWPGVSRLAKII 131          
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_METVA (50S ribosomal protein L14P OS=Methanococcus vannielii GN=rpl14p PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.939e-30
Identity = 61/112 (54.46%), Postives = 81/112 (72.32%), Query Frame = 1
Query:   85 CADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 420
            CADNTGAK L +I+VK   G + RLPSA VG +V  +VKKG P++RK+V+PA+I+RQ+K ++R DG  + FEDNA VIV P+G  KGS I GP+ KE A+ WP ++  A  I
Sbjct:   20 CADNTGAKELEVIAVKNYSGTVRRLPSAGVGQIVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSDIKGPVSKEAAERWPGVSRLAKII 131          
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_METMP (50S ribosomal protein L14P OS=Methanococcus maripaludis GN=rpl14p PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.013e-29
Identity = 61/112 (54.46%), Postives = 80/112 (71.43%), Query Frame = 1
Query:   85 CADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 420
            CADNTGAK L +I+VK   G + RLP+  VG MV  +VKKG P++RK+V+PA+I+RQ+K +RR DG  + FEDNA VIV P+G  KGS I GP+ KE A+ WP ++  A  I
Sbjct:   20 CADNTGAKELEVIAVKNYVGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYRRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131          
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_METM7 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl14p PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.323e-29
Identity = 61/112 (54.46%), Postives = 80/112 (71.43%), Query Frame = 1
Query:   85 CADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 420
            CADNTGAK L II+VK   G + RLP+  VG MV  +VKKG P++RK+V+PA+I+RQ+K ++R DG  + FEDNA VIV P+G  KGS I GP+ KE A+ WP ++  A  I
Sbjct:   20 CADNTGAKELEIIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131          
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_META3 (50S ribosomal protein L14P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl14p PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.323e-29
Identity = 62/112 (55.36%), Postives = 80/112 (71.43%), Query Frame = 1
Query:   85 CADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 420
            CADNTGAK L II+VKG KG   RLP+  VG +V  +VKKG P++RK+V+PA+I+RQ+K +RR DG  + FEDNA VIV P+G  KGS I GP+ KE A+ W  ++  A  I
Sbjct:   20 CADNTGAKELEIIAVKGYKGVARRLPAGGVGSLVFVSVKKGTPEMRKQVLPAIIIRQKKEYRRPDGSRVKFEDNAAVIVTPEGSPKGSEIKGPVAKEAAERWAGVSRLAKII 131          
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_METM6 (50S ribosomal protein L14P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl14p PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.728e-29
Identity = 60/112 (53.57%), Postives = 80/112 (71.43%), Query Frame = 1
Query:   85 CADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAI 420
            CADNTGAK L +I+VK   G + RLP+  VG MV  +VKKG P++RK+V+PA+I+RQ+K ++R DG  + FEDNA VIV P+G  KGS I GP+ KE A+ WP ++  A  I
Sbjct:   20 CADNTGAKELEVIAVKNYTGTVRRLPAGGVGHMVFVSVKKGTPEMRKQVLPAIIIRQKKEYKRADGTRVKFEDNAAVIVTPEGTPKGSEIKGPVSKEAAERWPGVSRLAKII 131          
BLAST of CK740134 vs. ExPASy Swiss-Prot
Match: RL14_SULSO (50S ribosomal protein L14P OS=Sulfolobus solfataricus GN=rpl14p PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.257e-29
Identity = 62/115 (53.91%), Postives = 81/115 (70.43%), Query Frame = 1
Query:   79 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 423
            VN ADN+G K   II V G +G L R+P A + DMVM ++KKG P++RK+   AVIVRQR P+RR DG ++ FEDNA VI+NP G  KG+ + GPI +E A+ WP+IAS A  +V
Sbjct:   24 VNVADNSGGKEAMIIGVYGYRGVLRRVPFANIADMVMVSIKKGTPEVRKQKFRAVIVRQRMPYRRPDGTWISFEDNAVVIINPDGTPKGTEVRGPIAREAAERWPKIASLATLVV 138          
The following BLAST results are available for this feature:
BLAST of CK740134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 461
Match NameE-valueIdentityDescription
RL14_PICTO1.563e-3053.0450S ribosomal protein L14P OS=Picrophilus torridus... [more]
RL14_METS52.041e-3054.7850S ribosomal protein L14P OS=Metallosphaera sedul... [more]
RL14_METS34.548e-3053.0450S ribosomal protein L14P OS=Methanobrevibacter s... [more]
RL14_METVS5.939e-3054.4650S ribosomal protein L14P OS=Methanococcus vannie... [more]
RL14_METVA5.939e-3054.4650S ribosomal protein L14P OS=Methanococcus vannie... [more]
RL14_METMP1.013e-2954.4650S ribosomal protein L14P OS=Methanococcus maripa... [more]
RL14_METM71.323e-2954.4650S ribosomal protein L14P OS=Methanococcus maripa... [more]
RL14_META31.323e-2955.3650S ribosomal protein L14P OS=Methanococcus aeolic... [more]
RL14_METM61.728e-2953.5750S ribosomal protein L14P OS=Methanococcus maripa... [more]
RL14_SULSO2.257e-2953.9150S ribosomal protein L14P OS=Sulfolobus solfatari... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6628 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740134 ID=CK740134; Name=CK740134; organism=Citrus sinensis; type=EST; length=596bp
AAATGTCGAAGCGAGGACGCGGAGGATCAGCAGGTAACAAGTTCAGGATG
TCACTGGGTTTGCCAGTGGCAGCAACCTGTGAACTGTGCTGACAACACTG
GGGCAAAGAACCTTTACATCATCTCAGTTAAGGGAATCAAAGGTCGCCTC
AACCGTTTGCCGTCTGCCTGTGTTGGAGACATGGTTATGGCTACTGTGAA
GAAAGGGAAGCCTGATCTTAGGAAGAAGGTGATGCCCGCCGTCATTGTAA
GGCAGCGCAAGCCATGGCGCAGAAAGGATGGTGTCTTCATGTACTTTGAA
GATAATGCAGGTGTTATTGTGAATCCAAAGGGAGAAATGAAGGGTTCTGC
CATCACCGGTCCAATTGGTAAAGAGTGTGCTGATTTGTGGCCGAGGATTG
CAAGTGCAGCCAATGCTATCGTTTAAGACATTCAAGACCGATAACCTATA
TCATCCTTTTTGTTGCACTAAAAAGAATTCTGGTGAAGTTTCATAGTAGG
AAGGAGTAAAGCTTTTCTGTGAACTTTCTGTATGATTTTGTTGGTCTAGT
TTTGGAAGTGGTATGAAAGTTTGGAGTTTTGTTGATCTTGAAAAAA
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