CK740164

Overview
NameCK740164
Unique NameCK740164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.005e-19
Identity = 57/146 (39.04%), Postives = 83/146 (56.85%), Query Frame = 2
Query:  101 PFFSILEDVLELPEEQENTRNNPSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEK--VPPPQPKTIQV 532
            PFF +   +  +P  +             +  A A    D  E P ++VF  D+PG+K  E+KV+VE  NVL +SG+R R+ +EK++     + R+ER  G+FMRKF LP+NA V+++ A  ++GVL VTV K   P PQ K I V
Sbjct:   29 PFFGLPSTLSTVPRSET----------AAETAAFANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEEKND----TWHRVERSSGQFMRKFRLPENAKVDQVKAGMENGVLTVTVPKNEAPKPQVKAINV 160          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP11_SOLPE (17.7 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 2.924e-19
Identity = 49/117 (41.88%), Postives = 78/117 (66.67%), Query Frame = 2
Query:  188 DAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTV--EKVPPPQPKTIQV 532
            +  A A T  D  E P ++VF  D+PG+K  E+KV+VE + VL +SGER  + ++K++    K+ R+ER  GKFMR+F LP+NA ++++ A  ++GVL VTV  E++  P  K+I++
Sbjct:   40 ETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEEDRVLQISGERNMEKEDKND----KWQRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEMKKPDVKSIEI 152          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP12_SOLPE (17.6 kDa class I heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.515e-19
Identity = 62/156 (39.74%), Postives = 94/156 (60.26%), Query Frame = 2
Query:   71 DLRSLAGFDSPFFSILEDVLELPEEQENTRNNPSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTV--EKVPPPQPKTIQV 532
            D RS + FD   FSI  DV +  +E   T +N       +  A A T  D  E P ++VF  D+PG+K  E+KV+VE + VL +SGER  + ++K++     + R+ER  GKFMR+F LP+NA ++++ A  ++GVL VTV  E+V  P  K+I++
Sbjct:   10 DRRSTSVFDP--FSI--DVFDPFKELGFTVSNSG-----ETSAFANTRIDWKETPEAHVFKADLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKND----TWHRVERSSGKFMRRFRLPENAKMDQVKASMENGVLTVTVPKEEVNNPDVKSIEI 152          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP11_MEDSA (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.515e-19
Identity = 46/121 (38.02%), Postives = 82/121 (67.77%), Query Frame = 2
Query:  176 AYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTV--EKVPPPQPKTIQV 532
            ++ ++  A  +T  D  E P ++VF  D+PG+K  E+KV++E + VL +SGER  + ++K++    ++ R+ER  GKFMR+F LP+NA ++++ A  ++GVL VTV  E++  P+ K+I++
Sbjct:   25 SFPQENSAFVSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDDRVLQISGERNVEKEDKND----QWHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEIKKPEVKSIEI 141          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HS17A_ORYSJ (17.9 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.9A PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.515e-19
Identity = 48/118 (40.68%), Postives = 74/118 (62.71%), Query Frame = 2
Query:  188 DAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQPKTIQVQVA 541
            +  A A    D  E P ++VF  D+PG+K  E+KV+V+  N+L +SGER ++ +EK +    ++ R+ER  GKF+R+F LPDNA  E+I A  ++GVL VTV K    +P    +Q++
Sbjct:   47 ETAAFAGARIDWKETPEAHVFKADVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTD----QWHRVERSSGKFLRRFRLPDNAKPEQIKASMENGVLTVTVPKEEAKKPDVKSIQIS 160          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HS16B_WHEAT (16.9 kDa class I heat shock protein 2 OS=Triticum aestivum GN=hsp16.9B PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.111e-18
Identity = 52/117 (44.44%), Postives = 77/117 (65.81%), Query Frame = 2
Query:  188 DAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEK--VPPPQPKTIQV 532
            +  A A    D  E P ++VF  D+PG+K  E+KV+VE  NVLVVSGER ++ ++K++    K+ R+ER  GKF+R+F L ++A VE++ A  ++GVL VTV K  V  P+ K IQ+
Sbjct:   37 ETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKND----KWHRVERSSGKFVRRFRLLEDAKVEEVKAGLENGVLTVTVPKAEVKKPEVKAIQI 149          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.895e-18
Identity = 46/119 (38.66%), Postives = 76/119 (63.87%), Query Frame = 2
Query:  185 RDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQPKTIQVQVA 541
            ++  A   T  D  E P ++VF  D+PG+K  E+KV++E   VL +SGER ++ +EK++    K+ R+ER  GKF+R+F LP+NA V+++ A   +GV+ VTV KV   +P+   + ++
Sbjct:   42 KETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKND----KWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDIS 156          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.233e-18
Identity = 49/124 (39.52%), Postives = 77/124 (62.10%), Query Frame = 2
Query:  167 PSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTV--EKVPPPQPKTIQV 532
            P+ +   +  A  +T  D  E P ++VF  D+PG+K  E+KVQ+E + VL +SGER  + ++K++     + R+ER  GKF R+F LP+NA V ++ A  ++GVL VTV  E+V  P  K I++
Sbjct:   33 PTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKND----TWHRVERSSGKFTRRFRLPENAKVNEVKASMENGVLTVTVPKEEVKKPDVKAIEI 152          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.233e-18
Identity = 49/114 (42.98%), Postives = 73/114 (64.04%), Query Frame = 2
Query:  197 AMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTV--EKVPPPQPKTIQV 532
            A   T  D  E P ++VF  D+PG+K  E+KVQ+E + VL +SGER  + ++K++     + R+ER  G FMR+F LP+NA VE++ A  ++GVL VTV  E+V  P  K I++
Sbjct:   42 AFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKND----TWHRVERSSGNFMRRFRLPENAKVEQVKASMENGVLTVTVPKEEVKKPDVKAIEI 151          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.515e-18
Identity = 48/114 (42.11%), Postives = 75/114 (65.79%), Query Frame = 2
Query:  185 RDAKAMAATPA--DVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQPK 520
            +D  +MA +PA  D  E P  +V ++D+PG+K  EIKV+VE   VL VSGERK++    + K G  + R+ER +GKF R+F LP N +++ + A  ++GVL +T++K+ P + K
Sbjct:   57 KDEASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKE----EEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLTLDKLSPGKIK 166          
The following BLAST results are available for this feature:
BLAST of CK740164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
HSP11_CHERU1.005e-1939.0418.3 kDa class I heat shock protein OS=Chenopodium... [more]
HSP11_SOLPE2.924e-1941.8817.7 kDa class I heat shock protein OS=Solanum per... [more]
HSP12_SOLPE6.515e-1939.7417.6 kDa class I heat shock protein OS=Solanum per... [more]
HSP11_MEDSA6.515e-1938.0218.1 kDa class I heat shock protein (Fragment) OS=... [more]
HS17A_ORYSJ6.515e-1940.6817.9 kDa class I heat shock protein OS=Oryza sativ... [more]
HS16B_WHEAT1.111e-1844.4416.9 kDa class I heat shock protein 2 OS=Triticum ... [more]
HSP11_DAUCA1.895e-1838.6617.8 kDa class I heat shock protein OS=Daucus caro... [more]
HSP14_SOYBN3.233e-1839.5217.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP13_SOYBN3.233e-1842.9817.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP41_SOYBN5.515e-1842.1122.0 kDa class IV heat shock protein OS=Glycine ma... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6658 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740164 ID=CK740164; Name=CK740164; organism=Citrus sinensis; type=EST; length=612bp
CAAACACAAAATCGCACTAGCATAGCTAAAGCTCTCGCATATATATAAAA
AAAGAGAAGAATACAACATGGATCTAAGAAGCCTAGCAGGTTTCGATTCA
CCATTCTTCTCAATCCTCGAAGACGTGCTGGAGCTGCCTGAAGAACAAGA
AAATACCCGAAACAACCCGTCAAGAGCCTACGTTCGGGATGCCAAAGCCA
TGGCGGCAACACCAGCAGATGTGGTGGAGTATCCGAATTCATACGTGTTC
GTTGTGGACATGCCAGGGATTAAGGCCAGCGAGATCAAGGTCCAAGTTGA
GAGCGAAAACGTGCTCGTGGTCAGCGGAGAGCGGAAACGGGATCCCAAGG
AGAAAGATAACAAAGATGGTGTTAAGTACGTGAGAATGGAGAGGAGGTTT
GGCAAGTTTATGAGGAAGTTCGTGCTGCCTGACAATGCTAATGTGGAAAA
GATATCTGCGTTGTGTCAGGACGGTGTTTTGATAGTCACTGTCGAGAAAG
TGCCCCCACCGCAGCCAAAGACCATTCAGGTTCAAGTTGCCTGAGACATT
TTAATTTGGGTGTGTTTGTGACTCAATTATCAATCTGACTATCTGAGTGT
CGTGATGTTTGT
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