CK740207

Overview
NameCK740207
Unique NameCK740207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length511
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_THEEB (Sulfate/thiosulfate import ATP-binding protein cysA OS=Thermosynechococcus elongatus (strain BP-1) GN=cysA PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.183e-24
Identity = 68/161 (42.24%), Postives = 97/161 (60.25%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            V ++GPSG+GKST+L++IAGL  PD G + + G+      + + +    IG VFQ  ALF  +TVR+N+ F L E  K+   +I+  V E L  V L G+ DR PS+LSGG ++RVALAR++       +VEP+VLL DEP   LD      +   +R +H
Sbjct:   31 VALLGPSGSGKSTLLRLIAGLEMPDTGRILLTGKD----ATYQSVQERNIGFVFQHYALFKHMTVRQNIAFGL-ELRKVPRAKINARVAELLELVQLTGLGDRYPSQLSGGQRQRVALARAL-------AVEPKVLLLDEPFGALDAKVRKELRAWLRRLH 179          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_ANASP (Sulfate/thiosulfate import ATP-binding protein cysA OS=Anabaena sp. (strain PCC 7120) GN=cysA PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.183e-24
Identity = 67/161 (41.61%), Postives = 96/161 (59.63%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            V ++GPSG+GKST+L++IAGL  PD G + + G+      +++ +    IG VFQ  ALF  LTVR+N+ F L E  K    ++   V++ L  V L G+ DR PS+LSGG ++RVALAR++       +VEP VLL DEP   LD      +   +R +H
Sbjct:   31 VALLGPSGSGKSTLLRLIAGLEKPDDGRIILTGKD----ATNQSVQERNIGFVFQHYALFKHLTVRQNIAFGL-EIRKAPANKVKGRVEQLLELVQLSGLGDRYPSQLSGGQRQRVALARAL-------AVEPSVLLLDEPFGALDAKVRKDLRAWLRRLH 179          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: YRBF_ECOLI (Uncharacterized ABC transporter ATP-binding protein yrbF OS=Escherichia coli (strain K12) GN=yrbF PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.018e-24
Identity = 62/160 (38.75%), Postives = 96/160 (60.00%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEIS-GLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            I+GPSG GK+T+L++I G +APD GE+   G     +      +   R+ ++FQS ALF  + V +NV + L E++++    +   V   L AVGL+G    +PSELSGGM +R ALAR+I       ++EP+++++DEP  G DPI   V+  LI  ++
Sbjct:   39 IMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAI-------ALEPDLIMFDEPFVGQDPITMGVLVKLISELN 191          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: YRBF_ECOL6 (Uncharacterized ABC transporter ATP-binding protein yrbF OS=Escherichia coli O6 GN=yrbF PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.018e-24
Identity = 62/160 (38.75%), Postives = 96/160 (60.00%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEIS-GLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            I+GPSG GK+T+L++I G +APD GE+   G     +      +   R+ ++FQS ALF  + V +NV + L E++++    +   V   L AVGL+G    +PSELSGGM +R ALAR+I       ++EP+++++DEP  G DPI   V+  LI  ++
Sbjct:   39 IMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAI-------ALEPDLIMFDEPFVGQDPITMGVLVKLISELN 191          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: YRBF_ECO57 (Uncharacterized ABC transporter ATP-binding protein yrbF OS=Escherichia coli O157:H7 GN=yrbF PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.018e-24
Identity = 62/160 (38.75%), Postives = 96/160 (60.00%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEIS-GLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            I+GPSG GK+T+L++I G +APD GE+   G     +      +   R+ ++FQS ALF  + V +NV + L E++++    +   V   L AVGL+G    +PSELSGGM +R ALAR+I       ++EP+++++DEP  G DPI   V+  LI  ++
Sbjct:   39 IMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAI-------ALEPDLIMFDEPFVGQDPITMGVLVKLISELN 191          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: FBPC_ECOLI (Fe(3+) ions import ATP-binding protein fbpC OS=Escherichia coli (strain K12) GN=fbpC PE=3 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 4.497e-24
Identity = 67/163 (41.10%), Postives = 100/163 (61.35%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            V ++GPSG GK+TIL+++AGL  P +G+++I G      ++   I    I +VFQS ALF  +++ ENVG+ L      R E +   VKE LA V L+G EDR   ++SGG ++RVALAR++I       ++P+VLL+DEP + LD      + D IR + K+
Sbjct:   35 VTLLGPSGCGKTTILRLVAGLEKPSEGQIFIDGED----VTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPRAE-LKARVKEALAMVDLEGFEDRFVDQISGGQQQRVALARALI-------LKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQ 185          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_CHLVU (Probable sulfate/thiosulfate import ATP-binding protein cysA OS=Chlorella vulgaris GN=cysA PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.002e-23
Identity = 66/163 (40.49%), Postives = 97/163 (59.51%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            VG++GPSG+GKST+L+++AGL  PD G +++ G+    +    ++    IG VFQ+ ALF  LTV ENV F L E  K+      + V E L  + L+   D  P++LSGG ++RVALAR++       ++EP+VLL DEP A LD      +   +R +H K
Sbjct:   31 VGLLGPSGSGKSTLLRVLAGLEKPDSGRIWLEGQDATQM----KLQDREIGFVFQNYALFPHLTVSENVAFGL-EIQKIDSLLKKKRVNELLKLMQLEKFGDSYPNQLSGGQRQRVALARAL-------AMEPKVLLLDEPFAALDAKIRKQLRSWLRELHHK 181          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: POTA_LACS1 (Spermidine/putrescine import ATP-binding protein potA OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=potA PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.308e-23
Identity = 68/161 (42.24%), Postives = 96/161 (59.63%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            ++GPSG GK+TIL IIAGL     G+VY  G++    I+D   +  ++  VFQ  ALF  L V +N+ F L +  K+  ++I E V E L  V L G EDR  SE+SGG ++RVA+AR+I+ D       P+VLL DEP + LD      ++  +RS+ KK
Sbjct:   37 LLGPSGCGKTTILNIIAGLSDATSGDVYFDGKR----INDVPANKRQVNTVFQDYALFQHLNVYDNIAFGL-KIKKVPADKIKEKVTEALRMVRLDGYEDRAISEMSGGQRQRVAIARAIVLD-------PKVLLLDEPLSALDQKLRAEMQYELRSLQKK 185          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: POTA_LISMO (Spermidine/putrescine import ATP-binding protein potA OS=Listeria monocytogenes GN=potA PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.709e-23
Identity = 68/161 (42.24%), Postives = 96/161 (59.63%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            ++GPSG GK+TIL++IAG L   KG++Y+  +    +I+    +   +  VFQ  ALF  L V ENV F L    K++ E I E VKE L  V LKG E R  SE+SGG ++RVA+AR+I+        EPEV+L DEP + LD    T ++  +R + K+
Sbjct:   39 LLGPSGCGKTTILRLIAGFLEASKGQIYLGDK----VINQIPANKRPVNTVFQDYALFPHLNVYENVAFGL-RIKKLKKEAIDEKVKEALRFVNLKGYEKREISEMSGGQRQRVAIARAIV-------NEPEVILLDEPLSALDLKLRTEMQYELRDLQKR 187          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: FBPC1_RHIME (Fe(3+) ions import ATP-binding protein fbpC 1 OS=Rhizobium meliloti GN=fbpC1 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.709e-23
Identity = 66/163 (40.49%), Postives = 99/163 (60.74%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            V ++GPSG GK+T L+++AGL  P  G + I G+    L ++E      + +VFQS ALF  +   +NV + L E+S MR ++  E  +E LA VGL G+  RLP+ELSGG ++RVA+AR+++       +EP+VLL DEP + LD      V   IR + ++
Sbjct:   37 VTLLGPSGCGKTTTLRMLAGLEHPTSGRILIGGKDVTMLPANER----DVSMVFQSYALFPHMNALDNVAYGL-ESSGMRRKEARERAEEGLALVGLPGMGQRLPAELSGGQQQRVAVARALV-------LEPQVLLLDEPLSNLDARLRRRVRTEIRELQQR 187          
The following BLAST results are available for this feature:
BLAST of CK740207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSA_THEEB1.183e-2442.24Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_ANASP1.183e-2441.61Sulfate/thiosulfate import ATP-binding protein cys... [more]
YRBF_ECOLI2.018e-2438.75Uncharacterized ABC transporter ATP-binding protei... [more]
YRBF_ECOL62.018e-2438.75Uncharacterized ABC transporter ATP-binding protei... [more]
YRBF_ECO572.018e-2438.75Uncharacterized ABC transporter ATP-binding protei... [more]
FBPC_ECOLI4.497e-2441.10Fe(3+) ions import ATP-binding protein fbpC OS=Esc... [more]
CYSA_CHLVU1.002e-2340.49Probable sulfate/thiosulfate import ATP-binding pr... [more]
POTA_LACS11.308e-2342.24Spermidine/putrescine import ATP-binding protein p... [more]
POTA_LISMO1.709e-2342.24Spermidine/putrescine import ATP-binding protein p... [more]
FBPC1_RHIME1.709e-2340.49Fe(3+) ions import ATP-binding protein fbpC 1 OS=R... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_6702 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740207 ID=CK740207; Name=CK740207; organism=Citrus sinensis; type=EST; length=511bp
GTTGGTATAATAGGGCCTTCAGGCACTGGGAAATCAACGATTTTAAAGAT
TATTGCTGGGCTTCTTGCTCCAGACAAGGGAGAGGTTTACATTCGAGGTA
GGAAGAGAGCTGGTTTGATTAGCGATGAGGAGATATCTGGTCTTCGGATT
GGATTGGTTTTCCAAAGTGCGGCTCTTTTTGACTCATTGACTGTCCGGGA
AAATGTTGGTTTCCTTCTGTATGAAAATTCGAAGATGCGTGATGAACAAA
TTTCAGAGCTTGTGAAGGAAAATTTGGCTGCTGTTGGATTAAAGGGAGTT
GAGGATCGCTTACCATCTGAGTTGTCTGGTGGAATGAAGAAAAGAGTTGC
TTTAGCTCGATCCATAATTTTCGATAACACAAAGGAATCAGTGGAGCCAG
AGGTGCTGTTGTATGATGAACCTACGGCTGGCCTTGATCCCATTGCATCC
ACTGTAGTTGAAGATCTGATCCGTTCCGTTCATAAGAAAGGTGAAAATGG
ACTTGCCAACC
back to top