CK740207

Overview
NameCK740207
Unique NameCK740207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length511
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CBIO1_THETN (Cobalt import ATP-binding protein cbiO 1 OS=Thermoanaerobacter tengcongensis GN=cbiO1 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 7.937e-21
Identity = 66/170 (38.82%), Postives = 104/170 (61.18%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEIS----GLRIGLVFQ--SAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGL-KGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            VGIIG +G+GKST+++ + GLL P KG++YI G      I+D+++S      ++GLVFQ     LF+  TV +++ F    N  + +E++ E V E +  VG+ K + D+ P ELSGG K+RVA+A  +       ++ P++L+ DEPTAGLDP     + + I+ +H K
Sbjct:   36 VGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGID----ITDKKVSLKDIRKQVGLVFQYPEYQLFEE-TVFKDIAF-GPSNLGLSEEEVKERVYEAMEIVGISKELADKSPFELSGGQKRRVAIAGIL-------AMRPKILILDEPTAGLDPKGKQEILNKIKEIHDK 192          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: Y1572_METJA (Putative ABC transporter ATP-binding protein MJ1572 OS=Methanocaldococcus jannaschii GN=MJ1572 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.037e-20
Identity = 66/171 (38.60%), Postives = 104/171 (60.82%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAG-LISDEEIS---GLRIGLVFQSA-ALFDSLTVRENVGFL-LYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGE 495
            V I+GP+G GK+T+LKI+ GL+ PDKGEVY  G+K    ++ D+E+      ++G VFQ+   +  + TV + V F  L+  SK   E+  E+  + L  + +  ++DR P  LSGG KK+V+++  +       SVEPEV+L DEPT+ LDP +   + +LI+S  + G+
Sbjct:   34 VAILGPNGAGKTTLLKILDGLVFPDKGEVYFEGKKLTDEILRDKELMKEFRRKVGFVFQNPDVMLFNPTVWDEVAFSPLHLYSK---EKAIEVTDKTLKDMKIYHLKDRHPYNLSGGEKKKVSISCIL-------SVEPEVILMDEPTSALDPKSRAEIMNLIKSFKECGK 194          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: SSUB_BACLD (Aliphatic sulfonates import ATP-binding protein ssuB OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=ssuB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.037e-20
Identity = 59/161 (36.65%), Postives = 91/161 (56.52%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            +IGPSG GKST+LKI AGL    +G + + GR+  G        G++ G +FQ   LF  +TV +N+   L     +++  + + V E +  V LKG E + P ELSGGM +RVA+AR+++        EPE+LL DEP   LD      ++D++  + ++
Sbjct:   37 VIGPSGCGKSTLLKIAAGLDGDYEGRISMNGREIKG-------PGIQQGFIFQEHRLFPWMTVEQNIAADL----SLKEPAVRKKVDELIETVRLKGAEKQYPRELSGGMSQRVAIARALL-------REPEILLLDEPFGALDAFTRKHLQDVLTDIWRE 179          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: POTA_LACC3 (Spermidine/putrescine import ATP-binding protein potA OS=Lactobacillus casei (strain ATCC 334) GN=potA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.037e-20
Identity = 62/144 (43.06%), Postives = 89/144 (61.81%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLD 438
            ++GPSG+GK+TIL+ IAG L   +GEV   G++    I+D   +  ++  VFQ  ALF  L V +NV F L  + +M  + I   V++ L  V L+G  DR  SELSGG ++RVA+AR+I+       +EP+VLL DEP + LD
Sbjct:   36 LLGPSGSGKTTILRAIAGFLDVSEGEVLFDGKR----INDVPANQRKVNTVFQDYALFPHLNVFDNVAFGLRLH-RMSKQDIQTKVEDALKMVRLQGYADREISELSGGQQQRVAIARAIV-------LEPQVLLLDEPLSALD 167          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_NITEU (Sulfate/thiosulfate import ATP-binding protein cysA OS=Nitrosomonas europaea GN=cysA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.037e-20
Identity = 63/164 (38.41%), Postives = 91/164 (55.49%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGF-LLYENSKMRDE--QISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            + ++GPSG+GK+T+L++IAGL   D G+V           +D+ I    +G VFQ  ALF ++T+ ENV F L     K R    +I+  V E L  V L  + DR P +LSGG ++R+ALAR++       +VEP VLL DEP   LD      +   +R +H
Sbjct:   31 LALLGPSGSGKTTLLRVIAGLETADSGQVLFNEEDS----TDKHIRDRHVGFVFQHYALFRNMTIFENVAFGLRVRPRKQRPNAPEINHRVTELLQLVQLDWLADRYPHQLSGGQRQRIALARAL-------AVEPSVLLLDEPFGALDAKVRKELRAWLRKLH 183          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CBIO2_CLOD6 (Cobalt import ATP-binding protein cbiO 2 OS=Clostridium difficile (strain 630) GN=cbiO2 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.037e-20
Identity = 66/171 (38.60%), Postives = 104/171 (60.82%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEIS----GLRIGLVFQ--SAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGL--KGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            VG+IG +G+GKST+++ + GLL P  GE++I        I+D+ ++      R+G+VFQ     LF+  T+ +++ F    N  + + +I   VK ++ AVGL  +G +D+ P ELSGG K+RVA+A  I       ++ PEVL+ DEPTAGLDP     + +LI+ +H+K
Sbjct:   36 VGLIGHTGSGKSTLIQHLNGLLKPSSGEIFINDFN----ITDKNLNLTEIRKRVGVVFQYPEYQLFEE-TIDKDIAF-GPSNLGLEESEIHNRVKASMEAVGLDYEGFKDKSPFELSGGQKRRVAIAGVI-------AMNPEVLILDEPTAGLDPGGRDEIFNLIKDLHEK 193          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: Y4020_METAC (Putative ABC transporter ATP-binding protein MA_4020 OS=Methanosarcina acetivorans GN=MA_4020 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.354e-20
Identity = 64/168 (38.10%), Postives = 99/168 (58.93%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLR--IGLVFQSAALFDSL---TVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            V ++G +G GKST+ K + G+L P  GEV ++G K    I+ + +   R  +G+VFQ     D +   +V E++ F    N  +  E++ + VKE L  VGL+G E+R P  LSGG KK VA+A  +       ++ PEV++ DEPTAGLDP++S    +LI  ++K+
Sbjct:   76 VAVLGANGAGKSTLFKHLNGILKPLSGEVLVKGEK----ITKKNVRMCRETVGIVFQDPD--DQVLAPSVEEDIAFGPI-NMGLSSEEVEKRVKEALKMVGLEGFEERAPHHLSGGQKKLVAIAGIL-------AMRPEVIVLDEPTAGLDPLSSARFLELIMKMNKE 229          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: METN_RALSO (Methionine import ATP-binding protein metN OS=Ralstonia solanacearum GN=metN PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.354e-20
Identity = 65/167 (38.92%), Postives = 97/167 (58.08%), Query Frame = 1
Query:    4 GIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLR-----IGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            GIIG SG GKST++++I  L  P  G V + G+    L +D    GLR     IG++FQ   L  S TV +NV   L E +    E+I E+V   L  VGL   +DR P+++SGG K+RV +AR++       + +P+VLL DE T+ LDP  +  + DL+R ++++
Sbjct:   36 GIIGRSGAGKSTLVRVINLLNRPTSGTVTVAGQSLTALNAD----GLRQARRKIGMIFQHFNLLSSRTVYDNVALPL-ELAGTPRERIREIVLPLLELVGLDAHKDRYPAQISGGQKQRVGIARAL-------ASQPDVLLSDEATSALDPETTRSILDLLRKINRE 190          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: METN_BORPE (Methionine import ATP-binding protein metN OS=Bordetella pertussis GN=metN PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.354e-20
Identity = 66/163 (40.49%), Postives = 94/163 (57.67%), Query Frame = 1
Query:    4 GIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDE-EISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            GIIGPSG GKST+++ I  L  PD+G + I G+   GL   +      RIG+VFQ   L    TV  NV   L E + +   +I   V+  LA VGL+ + DR PS++SGG K+RV +AR++  D       P+VLL DE T+ LDP  +  +  L+R +++K
Sbjct:   35 GIIGPSGAGKSTLVQCINLLERPDQGSIAIGGQALVGLGEAQLRNQRRRIGMVFQGFNLLARRTVYGNVALPL-EIAGVARAEIPARVERLLALVGLEHLRDRYPSQISGGQKQRVGIARALAND-------PDVLLSDEATSALDPETTHNILALLRDINRK 189          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: METN_BORPA (Methionine import ATP-binding protein metN OS=Bordetella parapertussis GN=metN PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.354e-20
Identity = 66/163 (40.49%), Postives = 94/163 (57.67%), Query Frame = 1
Query:    4 GIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDE-EISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            GIIGPSG GKST+++ I  L  PD+G + I G+   GL   +      RIG+VFQ   L    TV  NV   L E + +   +I   V+  LA VGL+ + DR PS++SGG K+RV +AR++  D       P+VLL DE T+ LDP  +  +  L+R +++K
Sbjct:   35 GIIGPSGAGKSTLVQCINLLERPDQGSIAIGGQALVGLGEAQLRNQRRRIGMVFQGFNLLARRTVYGNVALPL-EIAGVARAEIPARVERLLALVGLEHLRDRYPSQISGGQKQRVGIARALAND-------PDVLLSDEATSALDPETTHNILALLRDINRK 189          
The following BLAST results are available for this feature:
BLAST of CK740207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CBIO1_THETN7.937e-2138.82Cobalt import ATP-binding protein cbiO 1 OS=Thermo... [more]
Y1572_METJA1.037e-2038.60Putative ABC transporter ATP-binding protein MJ157... [more]
SSUB_BACLD1.037e-2036.65Aliphatic sulfonates import ATP-binding protein ss... [more]
POTA_LACC31.037e-2043.06Spermidine/putrescine import ATP-binding protein p... [more]
CYSA_NITEU1.037e-2038.41Sulfate/thiosulfate import ATP-binding protein cys... [more]
CBIO2_CLOD61.037e-2038.60Cobalt import ATP-binding protein cbiO 2 OS=Clostr... [more]
Y4020_METAC1.354e-2038.10Putative ABC transporter ATP-binding protein MA_40... [more]
METN_RALSO1.354e-2038.92Methionine import ATP-binding protein metN OS=Rals... [more]
METN_BORPE1.354e-2040.49Methionine import ATP-binding protein metN OS=Bord... [more]
METN_BORPA1.354e-2040.49Methionine import ATP-binding protein metN OS=Bord... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6702 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740207 ID=CK740207; Name=CK740207; organism=Citrus sinensis; type=EST; length=511bp
GTTGGTATAATAGGGCCTTCAGGCACTGGGAAATCAACGATTTTAAAGAT
TATTGCTGGGCTTCTTGCTCCAGACAAGGGAGAGGTTTACATTCGAGGTA
GGAAGAGAGCTGGTTTGATTAGCGATGAGGAGATATCTGGTCTTCGGATT
GGATTGGTTTTCCAAAGTGCGGCTCTTTTTGACTCATTGACTGTCCGGGA
AAATGTTGGTTTCCTTCTGTATGAAAATTCGAAGATGCGTGATGAACAAA
TTTCAGAGCTTGTGAAGGAAAATTTGGCTGCTGTTGGATTAAAGGGAGTT
GAGGATCGCTTACCATCTGAGTTGTCTGGTGGAATGAAGAAAAGAGTTGC
TTTAGCTCGATCCATAATTTTCGATAACACAAAGGAATCAGTGGAGCCAG
AGGTGCTGTTGTATGATGAACCTACGGCTGGCCTTGATCCCATTGCATCC
ACTGTAGTTGAAGATCTGATCCGTTCCGTTCATAAGAAAGGTGAAAATGG
ACTTGCCAACC
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