CK740207

Overview
NameCK740207
Unique NameCK740207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length511
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: POTA_STRP8 (Spermidine/putrescine import ATP-binding protein potA OS=Streptococcus pyogenes serotype M18 GN=potA PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.209e-22
Identity = 66/161 (40.99%), Postives = 100/161 (62.11%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            ++G SG+GKSTIL I+AGLL    G++Y+ G +    I+D  I+   I  VFQ+ ALF  +TV ENV F L +  K+  ++I++ VKE L  V L+G E+R   +LSGG ++RVA+AR+II        +P V+L DEP + LD    T ++  +R + ++
Sbjct:   38 LLGASGSGKSTILNIMAGLLDASSGDIYLDGER----INDLPINKRDIHTVFQNYALFPHMTVFENVAFAL-KLKKVDKKEIAKRVKETLKMVQLEGFENRSIQKLSGGQRQRVAIARAII-------NQPRVVLLDEPLSALDLKLRTEMQYELRELQQR 186          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: POTA_STRP6 (Spermidine/putrescine import ATP-binding protein potA OS=Streptococcus pyogenes serotype M6 GN=potA PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.209e-22
Identity = 66/161 (40.99%), Postives = 100/161 (62.11%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            ++G SG+GKSTIL I+AGLL    G++Y+ G +    I+D  I+   I  VFQ+ ALF  +TV ENV F L +  K+  ++I++ VKE L  V L+G E+R   +LSGG ++RVA+AR+II        +P V+L DEP + LD    T ++  +R + ++
Sbjct:   38 LLGASGSGKSTILNIMAGLLDASSGDIYLDGER----INDLPINKRDIHTVFQNYALFPHMTVFENVAFAL-KLKKVDKKEIAKRVKETLKMVQLEGYENRSIQKLSGGQRQRVAIARAII-------NQPRVVLLDEPLSALDLKLRTEMQYELRELQQR 186          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: POTA_STRP3 (Spermidine/putrescine import ATP-binding protein potA OS=Streptococcus pyogenes serotype M3 GN=potA PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.209e-22
Identity = 66/161 (40.99%), Postives = 100/161 (62.11%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            ++G SG+GKSTIL I+AGLL    G++Y+ G +    I+D  I+   I  VFQ+ ALF  +TV ENV F L +  K+  ++I++ VKE L  V L+G E+R   +LSGG ++RVA+AR+II        +P V+L DEP + LD    T ++  +R + ++
Sbjct:   38 LLGASGSGKSTILNIMAGLLDASSGDIYLDGER----INDLPINKRDIHTVFQNYALFPHMTVFENVAFAL-KLKKVDKKEIAKRVKETLKMVQLEGYENRSIQKLSGGQRQRVAIARAII-------NQPRVVLLDEPLSALDLKLRTEMQYELRELQQR 186          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: POTA_STRP1 (Spermidine/putrescine import ATP-binding protein potA OS=Streptococcus pyogenes serotype M1 GN=potA PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.209e-22
Identity = 66/161 (40.99%), Postives = 100/161 (62.11%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            ++G SG+GKSTIL I+AGLL    G++Y+ G +    I+D  I+   I  VFQ+ ALF  +TV ENV F L +  K+  ++I++ VKE L  V L+G E+R   +LSGG ++RVA+AR+II        +P V+L DEP + LD    T ++  +R + ++
Sbjct:   38 LLGASGSGKSTILNIMAGLLDASSGDIYLDGER----INDLPINKRDIHTVFQNYALFPHMTVFENVAFAL-KLKKVDKKEIAKRVKETLKMVQLEGFENRSIQKLSGGQRQRVAIARAII-------NQPRVVLLDEPLSALDLKLRTEMQYELRELQQR 186          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: POTA_LISW6 (Spermidine/putrescine import ATP-binding protein potA OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=potA PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.209e-22
Identity = 65/161 (40.37%), Postives = 96/161 (59.63%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            ++GPSG GK+TIL++IAG L   +G++Y+  +    +I+    +   +  VFQ  ALF  L V ENV F L    K++ E I + V+E L  V LKG E R  SE+SGG ++RVA+AR+I+        EPEV+L DEP + LD    T ++  +R + K+
Sbjct:   39 LLGPSGCGKTTILRLIAGFLEASEGQIYLGDK----VINQIPANKRPVNTVFQDYALFPHLNVYENVAFGL-RIKKLKKEAIDKKVQEALRFVNLKGYEKREISEMSGGQRQRVAIARAIV-------NEPEVILLDEPLSALDLKLRTEMQYELRDLQKR 187          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_MYCTU (Sulfate/thiosulfate import ATP-binding protein cysA OS=Mycobacterium tuberculosis GN=cysA PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.209e-22
Identity = 66/159 (41.51%), Postives = 90/159 (56.60%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            ++GPSG+GKST+L+ IAGL  PD G + I GR     ++        IG VFQ  A F  LTVR+NV F L    + + E I   V   L  VGL G + R P++LSGG ++R+ALAR++       +V+PEVLL DEP   LD      +   +R +H
Sbjct:   37 LLGPSGSGKSTLLRTIAGLDQPDTGTITINGRD----VTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAFGLKIRKRPKAE-IKAKVDNLLQVVGLSGFQSRYPNQLSGGQRQRMALARAL-------AVDPEVLLLDEPFGALDAKVREELRAWLRRLH 183          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_MYCBO (Sulfate/thiosulfate import ATP-binding protein cysA OS=Mycobacterium bovis GN=cysA PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 4.209e-22
Identity = 66/159 (41.51%), Postives = 90/159 (56.60%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            ++GPSG+GKST+L+ IAGL  PD G + I GR     ++        IG VFQ  A F  LTVR+NV F L    + + E I   V   L  VGL G + R P++LSGG ++R+ALAR++       +V+PEVLL DEP   LD      +   +R +H
Sbjct:   37 LLGPSGSGKSTLLRTIAGLDQPDTGTITINGRD----VTRVPPQRRGIGFVFQHYAAFKHLTVRDNVAFGLKIRKRPKAE-IKAKVDNLLQVVGLSGFQSRYPNQLSGGQRQRMALARAL-------AVDPEVLLLDEPFGALDAKVREELRAWLRRLH 183          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: POTA_LAWIP (Spermidine/putrescine import ATP-binding protein potA OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=potA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.497e-22
Identity = 64/161 (39.75%), Postives = 96/161 (59.63%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            ++GPSG GK+TIL+II+G   PD GE+ I G   +G   +      ++  VFQ  ALF  +TVR+NV F L    K   E+++ELV E L  V L+   DR PS+LSGG ++RVA+AR+++        +P +LL DEP + LD     +++  I+ + +K
Sbjct:   38 LLGPSGCGKTTILRIISGFETPDVGEILIAGVNVSGFPPERR----QVNTVFQHYALFPHMTVRDNVAFGL-RMQKCPREKVNELVFEALRMVHLENFADRRPSQLSGGQQQRVAIARAVV-------NKPLLLLLDEPFSALDHKLRQIMQLEIKHLQRK 186          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_XANAC (Sulfate/thiosulfate import ATP-binding protein cysA OS=Xanthomonas axonopodis pv. citri GN=cysA PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 5.497e-22
Identity = 65/166 (39.16%), Postives = 100/166 (60.24%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYE---NSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            + ++GPSG+GK+T+L+I+AGL   D G+V   G + A  +S   +   R+G VFQ  ALF  + V EN+ F L     N++  + +I   V+E LA V L+G+E R P++LSGG ++RVALAR++       ++EP VLL DEP   LD      +   +R +H++
Sbjct:   31 LALLGPSGSGKTTLLRIMAGLEHADGGQVLF-GDEDATRMS---VQSRRVGFVFQHYALFKHMDVFENIAFGLRVRRGNARWAEARIRARVEELLALVQLQGLEQRYPTQLSGGQRQRVALARAL-------AIEPRVLLLDEPFGALDAQVRRDLRRWLRELHER 185          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_NOCFA (Sulfate/thiosulfate import ATP-binding protein cysA OS=Nocardia farcinica GN=cysA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 5.497e-22
Identity = 65/161 (40.37%), Postives = 95/161 (59.01%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            ++GPSG+GKST+L+ IAGL A D G V I G+    +   +      IG VFQ  A F  +TVR+NV F L    + + E I++ V E L  VGL G + R P++LSGG ++R+ALAR++       +V+P+VLL DEP   LD      +   +R +H++
Sbjct:   32 LLGPSGSGKSTLLRSIAGLEALDDGVVVIAGKDVTRVAPQKR----DIGFVFQHYAAFKHMTVRDNVAFGLKIRKRPKAE-ITKRVDELLGIVGLDGFQHRYPAQLSGGQRQRMALARAL-------AVDPQVLLLDEPFGALDAKVRADLRTWLRRLHEE 180          
The following BLAST results are available for this feature:
BLAST of CK740207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
POTA_STRP84.209e-2240.99Spermidine/putrescine import ATP-binding protein p... [more]
POTA_STRP64.209e-2240.99Spermidine/putrescine import ATP-binding protein p... [more]
POTA_STRP34.209e-2240.99Spermidine/putrescine import ATP-binding protein p... [more]
POTA_STRP14.209e-2240.99Spermidine/putrescine import ATP-binding protein p... [more]
POTA_LISW64.209e-2240.37Spermidine/putrescine import ATP-binding protein p... [more]
CYSA_MYCTU4.209e-2241.51Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_MYCBO4.209e-2241.51Sulfate/thiosulfate import ATP-binding protein cys... [more]
POTA_LAWIP5.497e-2239.75Spermidine/putrescine import ATP-binding protein p... [more]
CYSA_XANAC5.497e-2239.16Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_NOCFA5.497e-2240.37Sulfate/thiosulfate import ATP-binding protein cys... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6702 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740207 ID=CK740207; Name=CK740207; organism=Citrus sinensis; type=EST; length=511bp
GTTGGTATAATAGGGCCTTCAGGCACTGGGAAATCAACGATTTTAAAGAT
TATTGCTGGGCTTCTTGCTCCAGACAAGGGAGAGGTTTACATTCGAGGTA
GGAAGAGAGCTGGTTTGATTAGCGATGAGGAGATATCTGGTCTTCGGATT
GGATTGGTTTTCCAAAGTGCGGCTCTTTTTGACTCATTGACTGTCCGGGA
AAATGTTGGTTTCCTTCTGTATGAAAATTCGAAGATGCGTGATGAACAAA
TTTCAGAGCTTGTGAAGGAAAATTTGGCTGCTGTTGGATTAAAGGGAGTT
GAGGATCGCTTACCATCTGAGTTGTCTGGTGGAATGAAGAAAAGAGTTGC
TTTAGCTCGATCCATAATTTTCGATAACACAAAGGAATCAGTGGAGCCAG
AGGTGCTGTTGTATGATGAACCTACGGCTGGCCTTGATCCCATTGCATCC
ACTGTAGTTGAAGATCTGATCCGTTCCGTTCATAAGAAAGGTGAAAATGG
ACTTGCCAACC
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