CK740207

Overview
NameCK740207
Unique NameCK740207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length511
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_CAUCR (Sulfate/thiosulfate import ATP-binding protein cysA OS=Caulobacter crescentus GN=cysA PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 9.376e-22
Identity = 63/164 (38.41%), Postives = 94/164 (57.32%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLL---YENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            + ++GPSG+GK+T+L+ IAGL  PD G+V   G+     ++    +  R+G VFQ  ALF  +TV +N+ F L       K    +I+  V+E L  V L+G+  R PS+LSGG ++RVAL+R++       +V+P VLL DEP   LD      +   +R VH
Sbjct:   31 LALLGPSGSGKTTLLRTIAGLEFPDAGQVLFDGQD----VTYASAAARRVGFVFQQYALFKHMTVAKNIAFGLDVRKGKDKPSKAEIARRVEELLKLVELEGLGGRYPSQLSGGQRQRVALSRAL-------AVQPSVLLLDEPFGALDATVRKSLRRELRRVH 183          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA1_SHEON (Sulfate/thiosulfate import ATP-binding protein cysA 1 OS=Shewanella oneidensis GN=cysA1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 9.376e-22
Identity = 60/164 (36.59%), Postives = 93/164 (56.71%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGF---LLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            +G++GPSG+GK+T+L+IIAGL   D G ++   R     ++   +   R+G VFQ+ ALF  +TV +NV F   ++ +  +    +I + V   L  V L  +  R P +LSGG K+R+ALAR++       + +PEVLL DEP   LD      +   +RS+H
Sbjct:   31 IGLLGPSGSGKTTLLRIIAGLEGADSGHIHFGNRD----VTQVHVRDRRVGFVFQNYALFRHMTVADNVAFGLEVIPKKQRPSAAEIQKRVSHLLEMVQLGHLAQRYPEQLSGGQKQRIALARAL-------ATQPEVLLLDEPFGALDAKVRKELRRWLRSLH 183          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: THIQ_SILST (Thiamine import ATP-binding protein thiQ OS=Silicibacter sp. (strain TM1040) GN=thiQ PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.225e-21
Identity = 64/168 (38.10%), Postives = 94/168 (55.95%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGL 504
            V +IGPSG GKST+L+ IAG      G+V  RG      ++        + ++FQ   LF  LTVR+N G  +  N K+R ++  + V+E +A VGL G+E+R P+ELSGG + R ALAR ++          ++LL DEP A L P     + DL++ +    ENG+
Sbjct:   28 VAVIGPSGAGKSTLLEAIAGFQPLHAGQVLWRGED----LTAHRPGQRPVAMLFQDGNLFPHLTVRQNAGLGIDPNRKLRPKE-RQTVEEAIARVGLGGLEERKPAELSGGQQSRAALARVLV-------QRRDILLLDEPFAALGPALKAEMLDLVKEI--TSENGV 181          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: POTA_LACAC (Spermidine/putrescine import ATP-binding protein potA OS=Lactobacillus acidophilus GN=potA PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.225e-21
Identity = 69/161 (42.86%), Postives = 94/161 (58.39%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            ++GPSG+GKSTIL+IIAG   P  G+V+  G+     I+D + S   I  VFQ+ ALF  L V ENV F L    K  +E I   VK+ L  V L G  +R  SELSGG ++RVA+AR+I+        EP+VLL DE  + LD      ++  +R++ KK
Sbjct:   35 LLGPSGSGKSTILRIIAGFTQPSSGQVFFDGKD----ITDLDASKRHINTVFQNYALFPHLNVFENVAFGLKIKKKPLNE-IRPAVKDALHMVRLDGYANREISELSGGQQQRVAIARAIV-------NEPKVLLLDESLSALDKRLRKDMQFELRAIQKK 183          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: THIQ_PHOPR (Thiamine import ATP-binding protein thiQ OS=Photobacterium profundum GN=thiQ PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.599e-21
Identity = 60/163 (36.81%), Postives = 96/163 (58.90%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            + +IGPSG GKS++L +IAG L PD GE+++ G     LI+ +  +   + ++FQ   LF  LTV EN+G  ++   K+  ++  ++V    A VG+    DRLP +LSGG K+RVALAR +I        +  +LL DEP + LDP     + +L++ + ++
Sbjct:   37 IALIGPSGAGKSSLLAMIAGFLKPDSGELHLNGE----LITTQAPANRPLSMLFQEHNLFPHLTVFENIGLGIHPGLKLSRQEKEDIVVA-AARVGVNKYLDRLPEQLSGGQKQRVALARCLI-------RQRPLLLLDEPFSALDPALRKEMLELVKHIARE 187          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: FBPC_PHOPR (Fe(3+) ions import ATP-binding protein fbpC OS=Photobacterium profundum GN=fbpC PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.599e-21
Identity = 58/163 (35.58%), Postives = 100/163 (61.35%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            V ++GPSG GK+T+L+++AGL  P  G+++I G      +++  I    I +VFQS ALF  L++ +NVG+ L +  K+   +I + V + L  V L G+ DR   ++SGG ++R+ALAR+++       ++P+VLL+DEP + LD      + + IR + ++
Sbjct:   35 VTLLGPSGCGKTTVLRLVAGLEKPTSGQIFIDGED----VTNTSIQQRDICMVFQSYALFPHLSLYDNVGYGL-KMLKLPAAEIKQRVDDALKLVDLSGMGDRFVDQISGGQQQRIALARALV-------LKPKVLLFDEPLSNLDANLRRSMRETIRDLQQR 185          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_ERWCT (Sulfate/thiosulfate import ATP-binding protein cysA OS=Erwinia carotovora subsp. atroseptica GN=cysA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.599e-21
Identity = 62/149 (41.61%), Postives = 86/149 (57.72%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLY---ENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLD 438
            V ++GPSG GK+T+L+IIAGL  PD G +   G+     +S  ++    +G VFQ  ALF  +TV +NV F L    +N +     I + V E L  V L  + DR P +LSGG ++R+ALAR++I       VEP +LL DEP   LD
Sbjct:   31 VALLGPSGCGKTTLLRIIAGLEQPDSGSIIFHGQD----VSVHDVRKRNVGFVFQHYALFRHMTVFDNVAFGLRMKPKNIRPSKSDIEKKVHELLNLVQLDWLGDRYPEQLSGGQRQRIALARALI-------VEPSILLLDEPFGALD 168          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_BURPS (Sulfate/thiosulfate import ATP-binding protein cysA OS=Burkholderia pseudomallei GN=cysA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.599e-21
Identity = 69/166 (41.57%), Postives = 96/166 (57.83%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISEL-----VKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            V ++GPSG GK+T+L++IAGL   D G+V ++G   A + + E     ++G VFQ  ALF  +TV ENV F L    K R E+ SE      V E L+ V L  +  R PSELSGG ++R+ALAR++       +VEP+VLL DEP   LD      +   +R +H
Sbjct:   31 VALLGPSGCGKTTLLRVIAGLEHADSGQVVLQGLDVASVGARER----QVGFVFQHYALFRHMTVFENVAFGL--RVKPRRERPSEAAIRAKVHELLSLVQLDWLAQRYPSELSGGQRQRIALARAL-------AVEPKVLLLDEPFGALDAKVRKELRGWLRRLH 183          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_BURMA (Sulfate/thiosulfate import ATP-binding protein cysA OS=Burkholderia mallei GN=cysA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.599e-21
Identity = 69/166 (41.57%), Postives = 96/166 (57.83%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISEL-----VKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            V ++GPSG GK+T+L++IAGL   D G+V ++G   A + + E     ++G VFQ  ALF  +TV ENV F L    K R E+ SE      V E L+ V L  +  R PSELSGG ++R+ALAR++       +VEP+VLL DEP   LD      +   +R +H
Sbjct:   31 VALLGPSGCGKTTLLRVIAGLEHADSGQVVLQGLDVASVGARER----QVGFVFQHYALFRHMTVFENVAFGL--RVKPRRERPSEAAIRAKVHELLSLVQLDWLAQRYPSELSGGQRQRIALARAL-------AVEPKVLLLDEPFGALDAKVRKELRGWLRRLH 183          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: POTA_DESDG (Spermidine/putrescine import ATP-binding protein potA OS=Desulfovibrio desulfuricans (strain G20) GN=potA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.089e-21
Identity = 59/144 (40.97%), Postives = 90/144 (62.50%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLD 438
            ++GPSG GK+TIL++++G   P  G+V + GR    +++D      ++  VFQ+ ALF  +TVR+NVGF L    + +DE I+  V+E L  V L+   DR P+ LSGG ++RVA+AR+++ +       P VLL DEP + LD
Sbjct:   38 LLGPSGCGKTTILRLLSGFETPSSGDVILSGR----VVNDVPPEQRQVNTVFQNYALFPHMTVRDNVGFGLKMQKRPKDE-IARRVREALKMVHLEQFGDRKPARLSGGQQQRVAIARAVVNN-------PYVLLLDEPFSALD 169          
The following BLAST results are available for this feature:
BLAST of CK740207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CYSA_CAUCR9.376e-2238.41Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA1_SHEON9.376e-2236.59Sulfate/thiosulfate import ATP-binding protein cys... [more]
THIQ_SILST1.225e-2138.10Thiamine import ATP-binding protein thiQ OS=Silici... [more]
POTA_LACAC1.225e-2142.86Spermidine/putrescine import ATP-binding protein p... [more]
THIQ_PHOPR1.599e-2136.81Thiamine import ATP-binding protein thiQ OS=Photob... [more]
FBPC_PHOPR1.599e-2135.58Fe(3+) ions import ATP-binding protein fbpC OS=Pho... [more]
CYSA_ERWCT1.599e-2141.61Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_BURPS1.599e-2141.57Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_BURMA1.599e-2141.57Sulfate/thiosulfate import ATP-binding protein cys... [more]
POTA_DESDG2.089e-2140.97Spermidine/putrescine import ATP-binding protein p... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6702 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740207 ID=CK740207; Name=CK740207; organism=Citrus sinensis; type=EST; length=511bp
GTTGGTATAATAGGGCCTTCAGGCACTGGGAAATCAACGATTTTAAAGAT
TATTGCTGGGCTTCTTGCTCCAGACAAGGGAGAGGTTTACATTCGAGGTA
GGAAGAGAGCTGGTTTGATTAGCGATGAGGAGATATCTGGTCTTCGGATT
GGATTGGTTTTCCAAAGTGCGGCTCTTTTTGACTCATTGACTGTCCGGGA
AAATGTTGGTTTCCTTCTGTATGAAAATTCGAAGATGCGTGATGAACAAA
TTTCAGAGCTTGTGAAGGAAAATTTGGCTGCTGTTGGATTAAAGGGAGTT
GAGGATCGCTTACCATCTGAGTTGTCTGGTGGAATGAAGAAAAGAGTTGC
TTTAGCTCGATCCATAATTTTCGATAACACAAAGGAATCAGTGGAGCCAG
AGGTGCTGTTGTATGATGAACCTACGGCTGGCCTTGATCCCATTGCATCC
ACTGTAGTTGAAGATCTGATCCGTTCCGTTCATAAGAAAGGTGAAAATGG
ACTTGCCAACC
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