CK740207

Overview
NameCK740207
Unique NameCK740207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length511
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: FBPC_RHIEC (Fe(3+) ions import ATP-binding protein fbpC OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=fbpC PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.089e-21
Identity = 63/163 (38.65%), Postives = 97/163 (59.51%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            V ++GPSG GK+T L+++AGL  P  G + I G     L ++E      + +VFQS ALF  +T  +NV + L ++S +  ++  E  +E L  VGL G+  RLP+ELSGG ++RVA+AR+++       +EP+VLL DEP + LD      V   IR + ++
Sbjct:   37 VTLLGPSGCGKTTTLRMLAGLEHPTSGRILIGGADVTMLPANER----DVSMVFQSYALFPHMTSLDNVAYGL-QSSGLGKKEAREKAEEGLKLVGLAGMGHRLPAELSGGQQQRVAVARALV-------LEPQVLLLDEPLSNLDARLRRRVRTEIRELQQR 187          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_BRUSU (Sulfate/thiosulfate import ATP-binding protein cysA OS=Brucella suis GN=cysA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.089e-21
Identity = 62/166 (37.35%), Postives = 95/166 (57.23%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLY---ENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            + ++GPSG+GK+T+L++IAGL  P +G ++  G + A   S + +    +G VFQ  ALF  +TV +N+GF L      ++    +I     E L  V L G+E R P++LSGG ++RVALAR++       ++EP VLL DEP   LD      +   +R +H K
Sbjct:   31 IALLGPSGSGKTTLLRLIAGLETPTEGMIFF-GDEDA---SQKSVQERNVGFVFQHYALFRHMTVADNIGFGLKVRPGGTRPSTAEIRRRALELLDLVQLSGLEKRYPAQLSGGQRQRVALARAM-------AIEPRVLLLDEPFGALDAQVRKELRRWLREIHDK 185          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_BRUME (Sulfate/thiosulfate import ATP-binding protein cysA OS=Brucella melitensis GN=cysA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.089e-21
Identity = 62/166 (37.35%), Postives = 95/166 (57.23%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLY---ENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            + ++GPSG+GK+T+L++IAGL  P +G ++  G + A   S + +    +G VFQ  ALF  +TV +N+GF L      ++    +I     E L  V L G+E R P++LSGG ++RVALAR++       ++EP VLL DEP   LD      +   +R +H K
Sbjct:   31 IALLGPSGSGKTTLLRLIAGLETPTEGMIFF-GDEDA---SQKSVQERNVGFVFQHYALFRHMTVADNIGFGLKVRPGGTRPSTAEIRRRALELLDLVQLSGLEKRYPAQLSGGQRQRVALARAM-------AIEPRVLLLDEPFGALDAQVRKELRRWLREIHDK 185          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_BORBR (Sulfate/thiosulfate import ATP-binding protein cysA OS=Bordetella bronchiseptica GN=cysA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.089e-21
Identity = 63/164 (38.41%), Postives = 93/164 (56.71%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLL---YENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            V ++GPSG GK+T+L+IIAGL + D G V   G       +D ++   ++G VFQ  ALF  +TV ENV F L   + + +  + +I   V + L  V L  + DR P++LSGG ++R+ALAR++       +VEP VLL DEP   LD      +   +R +H
Sbjct:   31 VALLGPSGCGKTTLLRIIAGLESADAGSVLFAGED----ATDVDVRQRQVGFVFQHYALFKHMTVFENVAFGLRVRHRSQRPSEARIRAKVLDLLGLVQLDWLADRYPAQLSGGQRQRIALARAL-------AVEPRVLLLDEPFGALDAKVRKELRRWLRRLH 183          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: GLUA_CORGL (Glutamate transport ATP-binding protein gluA OS=Corynebacterium glutamicum GN=gluA PE=3 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 2.728e-21
Identity = 60/169 (35.50%), Postives = 99/169 (58.58%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLR-----IGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKG 492
            V ++GPSG+GKST+ + I  L   ++G + I G+     +  EE  GL      +G+VFQS  LF  LT+++NV     +  KM+  +  +L    L  VG+    D+ P++LSGG ++RVA+AR++       ++ P+++L+DEPT+ LDP     V D++ S+ K+G
Sbjct:   30 VVVLGPSGSGKSTLCRTINRLETIEEGTIEIDGK-----VLPEEGKGLANLRADVGMVFQSFNLFPHLTIKDNVTLAPIKVRKMKKSEAEKLAMSLLERVGIANQADKYPAQLSGGQQQRVAIARAL-------AMNPKIMLFDEPTSALDPEMVNEVLDVMASLAKEG 186          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_XANCP (Sulfate/thiosulfate import ATP-binding protein cysA OS=Xanthomonas campestris pv. campestris GN=cysA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.728e-21
Identity = 66/166 (39.76%), Postives = 99/166 (59.64%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGF-LLYENSKMR--DEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            + ++GPSG+GK+T+L+I+AGL   D G+V   G + A  +S   +   R+G VFQ  ALF  + V EN+ F L     K R  + +I   V+E LA V L+G+E R P++LSGG ++RVALAR++       ++EP VLL DEP   LD      +   +R +H++
Sbjct:   31 LALLGPSGSGKTTLLRIMAGLEHADGGQVLF-GDEDATRMS---VQSRRVGFVFQHYALFKHMDVFENIAFGLRVRRGKERWAEARIRARVEELLALVQLQGLEQRYPTQLSGGQRQRVALARAL-------AIEPRVLLLDEPFGALDAQVRRDLRRWLRELHEQ 185          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_BACCR (Sulfate/thiosulfate import ATP-binding protein cysA OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=cysA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.728e-21
Identity = 63/164 (38.41%), Postives = 90/164 (54.88%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKM---RDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            V ++GPSG+GK+T+L+IIAGL   D G +   G      ++D  +   ++G VFQ  ALF  + V ENV F L    K      E I E V E L  V + G   R P++LSGG ++R+ALAR++       +VEP++LL DEP   LD      +   +R +H
Sbjct:   31 VALLGPSGSGKTTLLRIIAGLEEADGGSISFDGED----LTDIHVKNRQVGFVFQHYALFKHMNVFENVAFGLKVRKKSLRPSAEAIEEKVTELLKLVKMDGFAKRYPAQLSGGQRQRIALARAL-------AVEPKILLLDEPFGALDAKVRKELRRWLRKLH 183          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA2_AGRT5 (Sulfate/thiosulfate import ATP-binding protein cysA 2 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=cysA2 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.728e-21
Identity = 60/162 (37.04%), Postives = 92/162 (56.79%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQ-ISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            + ++GPSG+GK+TIL+++AGL   D G ++        +     +    +G VFQ  ALF  +T+ EN+ F +  +   RD+  I   VKE L  V L G+ DR P+++SGG ++RVALAR++       SV+P+VLL DEP   LD      +   +R +H
Sbjct:   31 LALLGPSGSGKTTILRMVAGLEYSDGGRIFFGDEDATNI----PVRDRGVGFVFQHYALFPHMTLHENIAFGMKVSKVKRDKAAIDARVKELLNLVKLDGLGDRFPAQISGGQRQRVALARAL-------SVDPKVLLLDEPFGALDANVRRDLRRWLREIH 181          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: FBPC_ACTPL (Fe(3+) ions import ATP-binding protein fbpC OS=Actinobacillus pleuropneumoniae GN=fbpC PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.563e-21
Identity = 58/163 (35.58%), Postives = 97/163 (59.51%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            V ++GPSG GK+T+L+++AGL  P  G+++I G      ++   I    I +VFQS ALF  +++ +NVG+ L     + +E+  + VKE L  V L G  DR   ++SGG ++RVALAR+++       ++P+VL+ DEP + LD      + + IR + ++
Sbjct:   34 VTLLGPSGCGKTTVLRLVAGLENPTSGQIFIDGED----VTKSSIQNRDICIVFQSYALFPHMSIGDNVGYGL-RMQGVSNEERKQRVKEALELVDLAGFADRFVDQISGGQQQRVALARALV-------LKPKVLILDEPLSNLDANLRRSMREKIRELQQR 184          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_PSEAE (Sulfate/thiosulfate import ATP-binding protein cysA OS=Pseudomonas aeruginosa GN=cysA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.563e-21
Identity = 60/149 (40.27%), Postives = 85/149 (57.05%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLY---ENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLD 438
            V ++GPSG GK+T+L+IIAGL  PD G +   G      +S  ++    +G VFQ  ALF  +TV +NV F L    +  +  +  I   V E L  V L  + DR P +LSGG ++R+ALAR++       +VEP++LL DEP   LD
Sbjct:   31 VALLGPSGCGKTTLLRIIAGLETPDAGNIVFHGED----VSQHDVRDRNVGFVFQHYALFRHMTVFDNVAFGLRMKPKGERPGESAIKAKVHELLNMVQLDWLADRYPEQLSGGQRQRIALARAL-------AVEPKILLLDEPFGALD 168          
The following BLAST results are available for this feature:
BLAST of CK740207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FBPC_RHIEC2.089e-2138.65Fe(3+) ions import ATP-binding protein fbpC OS=Rhi... [more]
CYSA_BRUSU2.089e-2137.35Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_BRUME2.089e-2137.35Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_BORBR2.089e-2138.41Sulfate/thiosulfate import ATP-binding protein cys... [more]
GLUA_CORGL2.728e-2135.50Glutamate transport ATP-binding protein gluA OS=Co... [more]
CYSA_XANCP2.728e-2139.76Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_BACCR2.728e-2138.41Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA2_AGRT52.728e-2137.04Sulfate/thiosulfate import ATP-binding protein cys... [more]
FBPC_ACTPL3.563e-2135.58Fe(3+) ions import ATP-binding protein fbpC OS=Act... [more]
CYSA_PSEAE3.563e-2140.27Sulfate/thiosulfate import ATP-binding protein cys... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_6702 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740207 ID=CK740207; Name=CK740207; organism=Citrus sinensis; type=EST; length=511bp
GTTGGTATAATAGGGCCTTCAGGCACTGGGAAATCAACGATTTTAAAGAT
TATTGCTGGGCTTCTTGCTCCAGACAAGGGAGAGGTTTACATTCGAGGTA
GGAAGAGAGCTGGTTTGATTAGCGATGAGGAGATATCTGGTCTTCGGATT
GGATTGGTTTTCCAAAGTGCGGCTCTTTTTGACTCATTGACTGTCCGGGA
AAATGTTGGTTTCCTTCTGTATGAAAATTCGAAGATGCGTGATGAACAAA
TTTCAGAGCTTGTGAAGGAAAATTTGGCTGCTGTTGGATTAAAGGGAGTT
GAGGATCGCTTACCATCTGAGTTGTCTGGTGGAATGAAGAAAAGAGTTGC
TTTAGCTCGATCCATAATTTTCGATAACACAAAGGAATCAGTGGAGCCAG
AGGTGCTGTTGTATGATGAACCTACGGCTGGCCTTGATCCCATTGCATCC
ACTGTAGTTGAAGATCTGATCCGTTCCGTTCATAAGAAAGGTGAAAATGG
ACTTGCCAACC
back to top