CK740226
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740226 vs. ExPASy Swiss-Prot
Match: GDIB_HUMAN (Rab GDP dissociation inhibitor beta OS=Homo sapiens GN=GDI2 PE=1 SV=2) HSP 1 Score: 201.06 bits (510), Expect = 1.956e-60 Identity = 95/161 (59.01%), Postives = 126/161 (78.26%), Query Frame = 2 Query: 92 PKHTEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVSSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 574 P+ EG+D + T R++ K+ L + IDF GHALAL+R D YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP ++ + GKV+GV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND Sbjct: 155 PRTFEGIDPKKTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCYETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEI-IVQNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTND 313 HSP 2 Score: 52.7582 bits (125), Expect = 1.956e-60 Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 1 Query: 1 EALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHRG 108 EAL S LMG+FEKRR RKF +YV ++DE DP+T G Sbjct: 125 EALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEG 160
BLAST of CK740226 vs. ExPASy Swiss-Prot
Match: GDIB_PIG (Rab GDP dissociation inhibitor beta OS=Sus scrofa GN=GDI2 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.551e-60 Identity = 94/161 (58.39%), Postives = 125/161 (77.64%), Query Frame = 2 Query: 92 PKHTEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVSSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 574 P+ EG+D + RE+ K+ L + IDF GHALAL+R D YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP ++ + GKV+GV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NT+D Sbjct: 155 PRTFEGVDPKKTAMREVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEI-IVQNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTSD 313 HSP 2 Score: 55.0694 bits (131), Expect = 2.551e-60 Identity = 24/36 (66.67%), Postives = 29/36 (80.56%), Query Frame = 1 Query: 1 EALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHRG 108 EAL S LMG+FEKRR RKF +YV ++DENDP+T G Sbjct: 125 EALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEG 160
BLAST of CK740226 vs. ExPASy Swiss-Prot
Match: GDIB_RAT (Rab GDP dissociation inhibitor beta OS=Rattus norvegicus GN=Gdi2 PE=1 SV=2) HSP 1 Score: 198.749 bits (504), Expect = 9.611e-60 Identity = 94/161 (58.39%), Postives = 126/161 (78.26%), Query Frame = 2 Query: 92 PKHTEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVSSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 574 P+ EG+D + + R++ K+ L + IDF GH+LAL+R D YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP ++ + GKVVGV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND Sbjct: 155 PRTFEGVDPKKTSMRDVYKKFDLGQDVIDFTGHSLALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEI-IVQNGKVVGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTND 313 HSP 2 Score: 52.7582 bits (125), Expect = 9.611e-60 Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 1 Query: 1 EALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHRG 108 EAL S LMG+FEKRR RKF +YV ++DE DP+T G Sbjct: 125 EALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEG 160
BLAST of CK740226 vs. ExPASy Swiss-Prot
Match: GDIB_MOUSE (Rab GDP dissociation inhibitor beta OS=Mus musculus GN=Gdi2 PE=1 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 9.611e-60 Identity = 94/161 (58.39%), Postives = 126/161 (78.26%), Query Frame = 2 Query: 92 PKHTEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVSSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 574 P+ EG+D + + R++ K+ L + IDF GH+LAL+R D YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP ++ + GKVVGV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND Sbjct: 155 PRTFEGVDPKKTSMRDVYKKFDLGQDVIDFTGHSLALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEI-IVQNGKVVGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTND 313 HSP 2 Score: 52.7582 bits (125), Expect = 9.611e-60 Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 1 Query: 1 EALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHRG 108 EAL S LMG+FEKRR RKF +YV ++DE DP+T G Sbjct: 125 EALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEG 160
BLAST of CK740226 vs. ExPASy Swiss-Prot
Match: GDIB_CANFA (Rab GDP dissociation inhibitor beta OS=Canis familiaris GN=GDI2 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 1.634e-59 Identity = 94/161 (58.39%), Postives = 124/161 (77.02%), Query Frame = 2 Query: 92 PKHTEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVSSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 574 P+ EG+D + E+ K+ L + IDF GHALAL+R D YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP ++ + GKV+GV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND Sbjct: 155 PRTFEGIDPKKTAIGEVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEI-IVQNGKVIGVKSEGEVARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTND 313 HSP 2 Score: 52.7582 bits (125), Expect = 1.634e-59 Identity = 23/36 (63.89%), Postives = 28/36 (77.78%), Query Frame = 1 Query: 1 EALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHRG 108 EAL S LMG+FEKRR RKF +YV ++DE DP+T G Sbjct: 125 EALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEG 160
BLAST of CK740226 vs. ExPASy Swiss-Prot
Match: GDI1_YEAST (Rab GDP-dissociation inhibitor OS=Saccharomyces cerevisiae GN=GDI1 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 9.066e-48 Identity = 80/159 (50.31%), Postives = 115/159 (72.33%), Query Frame = 2 Query: 104 EGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEE-GKVVGVSSEGETAKCKKVVCDPSYLPNKVRKVG-RVARAIAIMSHPIPNTND 574 +G+DL + T E+ K+GL ++T +FIGHA+AL +D YL +PA + +R+ LY +S+AR+ G SPY+YP+YGLGELPQ FARLSA+YGGTYML+ P +V + ++ GK GV ++ T K V+ DP+Y P K + G RV RAI I++HP+PNT++ Sbjct: 167 QGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARY-GKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGTFKAPLVIADPTYFPEKCKSTGQRVIRAICILNHPVPNTSN 324 HSP 2 Score: 51.9878 bits (123), Expect = 9.066e-48 Identity = 23/41 (56.10%), Postives = 30/41 (73.17%), Query Frame = 1 Query: 1 EALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHRGNGLDQ 123 EA+ SPLMGIFEKRR +KF ++ Y E+D TH+G LD+ Sbjct: 133 EAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDK 173
BLAST of CK740226 vs. ExPASy Swiss-Prot
Match: GDI1_SCHPO (Probable secretory pathway GDP dissociation inhibitor 1 OS=Schizosaccharomyces pombe GN=gdi1 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 2.698e-45 Identity = 87/161 (54.04%), Postives = 118/161 (73.29%), Query Frame = 2 Query: 92 PKHTEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVSSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 574 P + +++ R + + K+GL T DFIGHA+AL+ DD YL +PA +T +R+ LYA SIA+F G SPYIYPLYGLGELPQ FARLSA+YGGTYMLN+P ++ + ++G +GV S + AK K+++ DPSY KVR VGR+ RAI I++HPIPNT++ Sbjct: 154 PSTYKDINIDRDSMESVFKKFGLQSGTQDFIGHAMALYLDDAYLKKPARETRERILLYASSIAKF-GKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNQPVDEIVYGDDGVAIGVRSGDQVAKAKQIIGDPSYFREKVRSVGRLVRAICILNHPIPNTDN 313
BLAST of CK740226 vs. ExPASy Swiss-Prot
Match: RABEP_DROME (Rab proteins geranylgeranyltransferase component A OS=Drosophila melanogaster GN=Rep PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.085e-13 Identity = 39/109 (35.78%), Postives = 60/109 (55.05%), Query Frame = 2 Query: 245 VKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVSSEGETAKCKKVVCDPSYLP--NKVRKVGRVARAIAIMSHPIPN 565 ++R + + S+ R+ G +P+++P+YG GELPQ F RL AVYGG Y L + + D +SS G+T + K VV P Y P + ++R + I S P+ N Sbjct: 231 MQRTQRFLGSLGRY-GNTPFLFPMYGCGELPQCFCRLCAVYGGIYCLKRAVDDIALDSNSNEFLLSSAGKTLRAKNVVSAPGYTPVSKGIELKPHISRGLFISSSPLGN 338
BLAST of CK740226 vs. ExPASy Swiss-Prot
Match: RAE2_MOUSE (Rab proteins geranylgeranyltransferase component A 2 OS=Mus musculus GN=Chml PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 1.297e-12 Identity = 47/161 (29.19%), Postives = 82/161 (50.93%), Query Frame = 2 Query: 104 EGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML-NKPECKVEFDEEGKVVG-VSSEGETAKCKKVVCDPSYLPNKV---RKVGRVARAIAIMSHPIPNTN 571 E D + + + + L N FI H++A+ + LD ++ K + + + RF G +P+I+PLYG GE+PQ F R+ AV+GG Y L +K +C V + G+ G + + G+ + + SYLP + + +++RA+ I I T+ Sbjct: 312 EYQDFKQCSFSDYLKTKKLTPNLQHFILHSIAMTSESSCTT---LDGLQATKNFLQCLGRF-GNTPFIFPLYGHGEIPQCFCRMCAVFGGVYCLRHKVQCLVVDKDSGRCKGIIDAFGQRISANYFIVEDSYLPKETCSNVQYKQISRAVLITDQSILKTD 468 HSP 2 Score: 21.557 bits (44), Expect = 1.297e-12 Identity = 8/29 (27.59%), Postives = 15/29 (51.72%), Query Frame = 1 Query: 1 EALKSPLMGIFEKRRARKFFIYVQDYDEN 87 + S + + EKR KF + DY+++ Sbjct: 281 DVFNSKELSMVEKRMLMKFLTFCLDYEQH 309 The following BLAST results are available for this feature:
BLAST of CK740226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740226 ID=CK740226; Name=CK740226; organism=Citrus sinensis; type=EST; length=575bpback to top |