CK740227
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740227 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 9.103e-25 Identity = 58/90 (64.44%), Postives = 63/90 (70.00%), Query Frame = 3 Query: 9 DIPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKA 275 DIPTYV+GVN Y + IISNASCTTNCLAPF KVLD++FGI+KGTMTTTHSYTGDQ NIVPTSTGAAKA Sbjct: 213 DIPTYVIGVNEQDYGHEVADIISNASCTTNCLAPFAKVLDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKA 302
BLAST of CK740227 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.189e-24 Identity = 58/90 (64.44%), Postives = 63/90 (70.00%), Query Frame = 3 Query: 9 DIPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKA 275 DIPTYVVGVN Y + IISNASCTTNCLAPFVKV+D++ GI+KGTMTTTHSYTGDQ NIVPTSTGAAKA Sbjct: 182 DIPTYVVGVNEQDYSHEVADIISNASCTTNCLAPFVKVMDEELGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKA 271
BLAST of CK740227 vs. ExPASy Swiss-Prot
Match: G3P2_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Synechocystis sp. (strain PCC 6803) GN=gap2 PE=1 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 7.706e-24 Identity = 58/90 (64.44%), Postives = 63/90 (70.00%), Query Frame = 3 Query: 9 DIPTYVVGVNADAYKPDE-PIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKA 275 +I TYVVGVNA YK +E +ISNASCTTNCLAPF KV++ FGIIKGTMTTTHSYTGDQ NIVPTSTGAAKA Sbjct: 128 NIGTYVVGVNAHEYKHEEYEVISNASCTTNCLAPFGKVINDNFGIIKGTMTTTHSYTGDQRILDASHRDLRRARAAAVNIVPTSTGAAKA 217
BLAST of CK740227 vs. ExPASy Swiss-Prot
Match: G3PA_CHOCR (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Chondrus crispus GN=GAPA PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.228e-22 Identity = 54/93 (58.06%), Postives = 64/93 (68.82%), Query Frame = 3 Query: 3 KGD-IPTYVVGVNADAYKPDE-PIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKA 275 KGD I T+VVGVN Y D+ I+SNASCTTNC+APF+KVLD +FG+++G MTTTHSYTGDQ NIVPT+TGAAKA Sbjct: 202 KGDGIGTFVVGVNEKDYSHDKYDIVSNASCTTNCMAPFMKVLDDEFGVVRGMMTTTHSYTGDQRLLDAGHRDLRRARSAALNIVPTTTGAAKA 294
BLAST of CK740227 vs. ExPASy Swiss-Prot
Match: G3PA_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Gracilaria verrucosa GN=GAPA PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.607e-21 Identity = 52/93 (55.91%), Postives = 64/93 (68.82%), Query Frame = 3 Query: 3 KGD-IPTYVVGVNADAYKPDE-PIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKA 275 KG+ + T+VVGVN Y D+ I+SNASCTTNC+APF+KVLD +FG+++G MTTTHSYTGDQ NIVPT+TGAAKA Sbjct: 204 KGEGVGTFVVGVNDHLYSHDKFDIVSNASCTTNCMAPFMKVLDDEFGVVRGMMTTTHSYTGDQRLLDAGHRDLRRARSAALNIVPTTTGAAKA 296
BLAST of CK740227 vs. ExPASy Swiss-Prot
Match: G3P_YARLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrowia lipolytica GN=GPD PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.106e-21 Identity = 51/91 (56.04%), Postives = 59/91 (64.84%), Query Frame = 3 Query: 6 GDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTGAAKA 275 GD P +VVGVN DAYKPD +ISNASCTTNCLAP KV++ K+GII+G MTT HS T Q NI+P+STGAAKA Sbjct: 125 GDAPMFVVGVNLDAYKPDMTVISNASCTTNCLAPLAKVVNDKYGIIEGLMTTVHSITATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKA 215
BLAST of CK740227 vs. ExPASy Swiss-Prot
Match: G3P2_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap2 PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 6.106e-21 Identity = 54/92 (58.70%), Postives = 60/92 (65.22%), Query Frame = 3 Query: 3 KGDIPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKA 275 K + T+V+GVN Y + IISNASCTTNCLAP KVL+ KFGIIKG+MTTTHSYTGDQ NIVPTSTGAAKA Sbjct: 126 KNEDGTFVIGVNHHDYDHNVHHIISNASCTTNCLAPIAKVLNDKFGIIKGSMTTTHSYTGDQRLLDASHRDLRRARAAAINIVPTSTGAAKA 217
BLAST of CK740227 vs. ExPASy Swiss-Prot
Match: G3P2_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Anabaena sp. (strain PCC 7120) GN=gap2 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.041e-20 Identity = 54/92 (58.70%), Postives = 60/92 (65.22%), Query Frame = 3 Query: 3 KGDIPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKA 275 K + T+V+GVN Y + IISNASCTTNCLAP KVL+ KFGIIKG+MTTTHSYTGDQ NIVPTSTGAAKA Sbjct: 126 KNEDGTFVMGVNHHDYDHNLHNIISNASCTTNCLAPIAKVLNDKFGIIKGSMTTTHSYTGDQRLLDASHRDLRRARAAAINIVPTSTGAAKA 217
BLAST of CK740227 vs. ExPASy Swiss-Prot
Match: G3P_MYCTU (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium tuberculosis GN=gap PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.030e-20 Identity = 50/86 (58.14%), Postives = 55/86 (63.95%), Query Frame = 3 Query: 18 TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKA 275 T V+GVN D Y + IISNASCTTNCLAP KVLD +FGI+KG MTT H+YT DQ NIVPTSTGAAKA Sbjct: 136 TIVLGVNDDKYDGSQNIISNASCTTNCLAPLAKVLDDEFGIVKGLMTTIHAYTQDQNLQDGPHKDLRRARAAALNIVPTSTGAAKA 221
BLAST of CK740227 vs. ExPASy Swiss-Prot
Match: G3P_MYCBO (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium bovis GN=gap PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.030e-20 Identity = 50/86 (58.14%), Postives = 55/86 (63.95%), Query Frame = 3 Query: 18 TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTGAAKA 275 T V+GVN D Y + IISNASCTTNCLAP KVLD +FGI+KG MTT H+YT DQ NIVPTSTGAAKA Sbjct: 136 TIVLGVNDDKYDGSQNIISNASCTTNCLAPLAKVLDDEFGIVKGLMTTIHAYTQDQNLQDGPHKDLRRARAAALNIVPTSTGAAKA 221 The following BLAST results are available for this feature:
BLAST of CK740227 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 323
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740227 ID=CK740227; Name=CK740227; organism=Citrus sinensis; type=EST; length=275bpback to top |