CK740274

Overview
NameCK740274
Unique NameCK740274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length515
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740274 vs. ExPASy Swiss-Prot
Match: CATA_ASCSU (Catalase OS=Ascaris suum GN=CAT PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.792e-15
Identity = 46/130 (35.38%), Postives = 69/130 (53.08%), Query Frame = 1
Query:   76 VPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAP-KCAQHNNHYDG-FMNFMHRDEEIDYFPSRYD-PVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALSD 456
            VPGI +S DK+LQ R+F+Y DTQ HRLGPNY+QLP+N P +   HN   DG F    ++     Y P+ ++  +   ++  +   +  G  ++     E+NF QP +    W     E    R VD ++D
Sbjct:  339 VPGIEFSPDKMLQGRLFAYPDTQFHRLGPNYVQLPINCPYRSRAHNTQRDGCFALDYNQGGMPTYHPNSFNGAIERTDVKESAWSV-SGDVDRFNGDDEDNFSQPRD---LWLKVMDETERARLVDNIAD 464          

HSP 2 Score: 33.4982 bits (75), Expect = 1.792e-15
Identity = 15/24 (62.50%), Postives = 19/24 (79.17%), Query Frame = 3
Query:    3 LVLNKNIDNFFAENEQLAFCPAIV 74
            +VLNKN  N+FAE EQ+AF P+ V
Sbjct:  315 IVLNKNPTNYFAEVEQIAFAPSHV 338          
BLAST of CK740274 vs. ExPASy Swiss-Prot
Match: CATB_DICDI (Catalase-B OS=Dictyostelium discoideum GN=catB PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.008e-15
Identity = 45/136 (33.09%), Postives = 59/136 (43.38%), Query Frame = 1
Query:   76 VPGIYYSNDKLLQTRIFSYADTQRHRL-GPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYD---------PVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFICRWVDALS 453
            VPGI +SND LLQ RIFSY DTQ  RL GPN+ ++P+N P C   NN  DG            YFP+  D                 P P  I G +        E++F Q    + S +   +   I  +   +S
Sbjct:  338 VPGIDFSNDPLLQGRIFSYLDTQLSRLGGPNFNEIPINRPVCPFANNQRDGIHRMTINKGGASYFPNSIDKGYPLLKEPSANKGGFRPYPENISGTKSYDRSETFEDHFSQATMFWNSMSQHEKNHIIAAYTFEIS 473          

HSP 2 Score: 34.2686 bits (77), Expect = 3.008e-15
Identity = 13/20 (65.00%), Postives = 18/20 (90.00%), Query Frame = 3
Query:    3 LVLNKNIDNFFAENEQLAFC 62
            +V+++N DNFFAE EQ+AFC
Sbjct:  314 MVIDRNPDNFFAETEQVAFC 333          
BLAST of CK740274 vs. ExPASy Swiss-Prot
Match: CATA_DROME (Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 3.030e-15
Identity = 37/71 (52.11%), Postives = 48/71 (67.61%), Query Frame = 1
Query:   76 VPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAP-KCAQHNNHYDGFMNFM-HRDEEIDYFPSRYD 282
            VPG+  S DK+L  R+FSY+DT RHRLGPNYLQ+PVN P K    N   DG MN   ++D   +YFP+ ++
Sbjct:  338 VPGVEPSPDKMLHGRLFSYSDTHRHRLGPNYLQIPVNCPYKVKIENFQRDGAMNVTDNQDGAPNYFPNSFN 408          

HSP 2 Score: 30.8018 bits (68), Expect = 3.030e-15
Identity = 13/22 (59.09%), Postives = 18/22 (81.82%), Query Frame = 3
Query:    3 LVLNKNIDNFFAENEQLAFCPA 68
            +VL++N  N+FAE EQ+AF PA
Sbjct:  314 MVLDRNPKNYFAEVEQIAFSPA 335          
BLAST of CK740274 vs. ExPASy Swiss-Prot
Match: CATE_PSEPU (Catalase HPII OS=Pseudomonas putida GN=katE PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 3.907e-15
Identity = 32/70 (45.71%), Postives = 40/70 (57.14%), Query Frame = 1
Query:   76 VPGIYYSNDKLLQTRIFSYADTQRHRL-GPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYD 282
            VPGI ++ND LLQ R+FSY DTQ  RL GPN+ Q+P+N P    HNN  D     +       Y P+  D
Sbjct:  361 VPGIDFTNDPLLQGRLFSYTDTQISRLGGPNFHQIPINRPVAPNHNNQRDALHQHVVHKGRASYEPNSID 430          

HSP 2 Score: 38.5058 bits (88), Expect = 3.907e-15
Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = 3
Query:    3 LVLNKNIDNFFAENEQLAFCP 65
            +VLN+N DNFFAE EQ+AFCP
Sbjct:  337 MVLNRNPDNFFAEVEQVAFCP 357          
BLAST of CK740274 vs. ExPASy Swiss-Prot
Match: CATA_VIBCH (Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.118e-15
Identity = 41/109 (37.61%), Postives = 61/109 (55.96%), Query Frame = 1
Query:   76 VPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRH-AEMHPTPPEICGGRREKCIIPKENNFKQPGERYRS 399
            +PGI  S D+LLQ R+F+YADTQ +RLG N  QLP+N P    ++++ +G  N      +I+Y PSR   ++   +      ++ G  ++K  I    NF Q G  YRS
Sbjct:  335 IPGIEPSEDRLLQGRLFAYADTQLYRLGANLFQLPINRPLVEVNSHNQEGASNSAQTASDINYQPSRKLELKEDPQFKAVQTQLVGSVQQKA-ISNPRNFYQAGVLYRS 442          

HSP 2 Score: 29.6462 bits (65), Expect = 5.118e-15
Identity = 13/22 (59.09%), Postives = 15/22 (68.18%), Query Frame = 3
Query:    3 LVLNKNIDNFFAENEQLAFCPA 68
            + LNK  DNFF E EQ AF P+
Sbjct:  311 MTLNKVPDNFFLETEQSAFAPS 332          
BLAST of CK740274 vs. ExPASy Swiss-Prot
Match: CATA_EMENI (Catalase A OS=Emericella nidulans GN=catA PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 8.560e-15
Identity = 38/111 (34.23%), Postives = 59/111 (53.15%), Query Frame = 1
Query:   76 VPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHA-----EMHPTPPEICGGRREKCIIPKENNFKQPGERY 393
            VPGI +S+D LLQ R FSY DTQ  RLG N+ ++P+N P C   N++ DG          ++Y+P+R++    A     + HP P     GR+ + + PK   +    + +
Sbjct:  362 VPGIDFSDDPLLQGRNFSYQDTQISRLGVNWEEIPINRPVCPFLNHNRDGAKRHRITKGTVNYWPNRFEANPPASDKGFKSHPAP---ITGRKRRDLTPKFKEYHNQAQLF 469          

HSP 2 Score: 33.8834 bits (76), Expect = 8.560e-15
Identity = 14/20 (70.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query:    3 LVLNKNIDNFFAENEQLAFC 62
            L LN+NID FF E EQ+AFC
Sbjct:  338 LELNRNIDEFFPETEQVAFC 357          
BLAST of CK740274 vs. ExPASy Swiss-Prot
Match: CATA_STAEP (Catalase OS=Staphylococcus epidermidis GN=katA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.640e-15
Identity = 50/144 (34.72%), Postives = 72/144 (50.00%), Query Frame = 1
Query:   76 VPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPK--ENNFKQPGERYRSWAPDRQERFICRWVDAL----SDPRVTH 471
            VPG+ YS DK+LQ R+FSY D QR+RLG N+ Q+PVN PK     N      DG M F+  ++     Y+P+          H  PP    G   +    +  +N F+QPG+ +R  + D +ER      +A+     D +V H
Sbjct:  321 VPGLDYSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENLCPFSRDGQMRFLDNNQGGGPHYYPNNQGIYESQPEHKKPPFPTDGDGYEYNYRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAMDGVSKDVKVRH 464          

HSP 2 Score: 26.1794 bits (56), Expect = 8.640e-15
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 3
Query:    9 LNKNIDNFFAENEQLAFCP 65
            LN+N +N+F + EQ AF P
Sbjct:  299 LNRNPENYFLDVEQAAFAP 317          
BLAST of CK740274 vs. ExPASy Swiss-Prot
Match: CATA_STAES (Catalase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=katA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.123e-14
Identity = 50/144 (34.72%), Postives = 72/144 (50.00%), Query Frame = 1
Query:   76 VPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPK--ENNFKQPGERYRSWAPDRQERFICRWVDAL----SDPRVTH 471
            VPG+ YS DK+LQ R+FSY D QR+RLG N+ Q+PVN PK     N      DG M F+  ++     Y+P+          H  PP    G   +    +  +N F+QPG+ +R  + D +ER      +A+     D +V H
Sbjct:  321 VPGLDYSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENLCPFSRDGQMRFLDNNQGGGPHYYPNNQGIYESQPEHKKPPFPTDGDGYEYNYRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAMDGVSKDVKVRH 464          

HSP 2 Score: 25.7942 bits (55), Expect = 1.123e-14
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 3
Query:    9 LNKNIDNFFAENEQLAFCP 65
            LN+N +N+F + EQ AF P
Sbjct:  299 LNRNPENYFLDVEQAAFTP 317          
BLAST of CK740274 vs. ExPASy Swiss-Prot
Match: CATA_STAEQ (Catalase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=katA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.123e-14
Identity = 50/144 (34.72%), Postives = 72/144 (50.00%), Query Frame = 1
Query:   76 VPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPK--ENNFKQPGERYRSWAPDRQERFICRWVDAL----SDPRVTH 471
            VPG+ YS DK+LQ R+FSY D QR+RLG N+ Q+PVN PK     N      DG M F+  ++     Y+P+          H  PP    G   +    +  +N F+QPG+ +R  + D +ER      +A+     D +V H
Sbjct:  321 VPGLDYSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENLCPFSRDGQMRFLDNNQGGGPHYYPNNQGIYESQPEHKKPPFPTDGDGYEYNYRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAMDGVSKDVKVRH 464          

HSP 2 Score: 25.7942 bits (55), Expect = 1.123e-14
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 3
Query:    9 LNKNIDNFFAENEQLAFCP 65
            LN+N +N+F + EQ AF P
Sbjct:  299 LNRNPENYFLDVEQAAFTP 317          
BLAST of CK740274 vs. ExPASy Swiss-Prot
Match: CATA_BRUSU (Catalase OS=Brucella suis GN=katA PE=3 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 1.123e-14
Identity = 34/53 (64.15%), Postives = 39/53 (73.58%), Query Frame = 1
Query:   76 VPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMN 234
            VPGI +S DK+LQ RIFSYAD  RHRLG +Y  +PVN PKC  H+ H DG MN
Sbjct:  319 VPGIGFSPDKMLQARIFSYADAHRHRLGTHYESIPVNQPKCLVHHYHRDGQMN 371          

HSP 2 Score: 25.7942 bits (55), Expect = 1.123e-14
Identity = 10/20 (50.00%), Postives = 14/20 (70.00%), Query Frame = 3
Query:    9 LNKNIDNFFAENEQLAFCPA 68
            LN+N +N+F E E  AF P+
Sbjct:  297 LNRNPENYFTEVENAAFSPS 316          
The following BLAST results are available for this feature:
BLAST of CK740274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
CATA_ASCSU1.792e-1535.38Catalase OS=Ascaris suum GN=CAT PE=2 SV=2[more]
CATB_DICDI3.008e-1533.09Catalase-B OS=Dictyostelium discoideum GN=catB PE=... [more]
CATA_DROME3.030e-1552.11Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV... [more]
CATE_PSEPU3.907e-1545.71Catalase HPII OS=Pseudomonas putida GN=katE PE=3 S... [more]
CATA_VIBCH5.118e-1537.61Catalase OS=Vibrio cholerae GN=VC_1585 PE=3 SV=2[more]
CATA_EMENI8.560e-1534.23Catalase A OS=Emericella nidulans GN=catA PE=2 SV=... [more]
CATA_STAEP8.640e-1534.72Catalase OS=Staphylococcus epidermidis GN=katA PE=... [more]
CATA_STAES1.123e-1434.72Catalase OS=Staphylococcus epidermidis (strain ATC... [more]
CATA_STAEQ1.123e-1434.72Catalase OS=Staphylococcus epidermidis (strain ATC... [more]
CATA_BRUSU1.123e-1464.15Catalase OS=Brucella suis GN=katA PE=3 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6417 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740274 ID=CK740274; Name=CK740274; organism=Citrus sinensis; type=EST; length=515bp
GGTTGGTTTTGAACAAGAACATTGATAACTTCTTTGCAGAGAATGAACAG
CTTGCTTTCTGCCCTGCTATTGTGGGTTCCTGGCATCTACTATTCAAATG
ATAAGTTGCTCCAGACTCGAATCTTCTCCTATGCTGATACTCAGAGGCAC
CGTCTAGGGCCGAACTATCTTCAACTCCCAGTAAATGCACCCAAATGTGC
TCAGCACAACAATCATTATGACGGTTTCATGAATTTCATGCACAGGGATG
AGGAGATCGATTACTTCCCTTCAAGGTATGATCCTGTCCGTCATGCTGAG
ATGCATCCAACTCCTCCTGAAATCTGCGGCGGAAGGCGCGAGAAGTGCAT
AATTCCAAAGGAAAACAACTTCAAACAACCTGGAGAGAGATACCGATCTT
GGGCACCAGACAGGCAAGAGCGATTCATCTGCAGATGGGTTGATGCTTTA
TCTGATCCACGCGTCACCCATGAGATCCCGCCACATATGGATCTCATACT
GGTCTCAGGCTTGCA
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