CK932608

Overview
NameCK932608
Unique NameCK932608
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RALA_MOUSE (Ras-related protein Ral-A OS=Mus musculus GN=Rala PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.222e-13
Identity = 48/145 (33.10%), Postives = 80/145 (55.17%), Query Frame = 1
Query:    7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 441
            I DTAGQE +  +  +Y+R  +G + V+ +T  ++F   +D + ++I     +++   LLVGNK D E +R V+ +E  N A ++   ++E SAKTR NV + F +L+ +I    +   E SK  +KN  K++   A      CC
Sbjct:   66 ILDTAGQEDYAAIRDNYFRSGEGFLCVFSITEMESFAATAD-FREQILRVKEDENVPFLLVGNKSDLEDKRQVSVEEAKNRADQWNVNYVETSAKTRANVDKVFFDLMREI---RARKMEDSK--EKNGKKKRKSLAKRIRERCC 204          
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB7B_DICDI (Ras-related protein Rab-7B OS=Dictyostelium discoideum GN=rab7B PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.222e-13
Identity = 42/113 (37.17%), Postives = 68/113 (60.18%), Query Frame = 1
Query:    7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK---LLVGNKVDKESERVVTKKEGINFAREY---GCLFIECSAKTRVNVQQCFEEL 327
            +WDT+GQERFR+L  SYYRGA   I+V+DVT   T  +L  +W  +    +  +D I    +++GNK+D +  RVVT+K  I + ++       + + SAK  +N++Q F+ +
Sbjct:   55 LWDTSGQERFRSLEISYYRGADYCILVFDVTNEKTLYDLK-LWRDDFIEKTEIRDPILFPFIILGNKID-DPNRVVTEKAAIQWCKDNIGGNLTYFDTSAKDNINIEQVFKHI 165          
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB44_MOUSE (Ras-related protein Rab-44 OS=Mus musculus GN=Rab44 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.222e-13
Identity = 47/145 (32.41%), Postives = 77/145 (53.10%), Query Frame = 1
Query:    7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 441
            +WDTAGQER+ +LT    R A+G++++YDVT +++FT++   W   +      +    +L+GNK+D E ER V  + G   A+E G  F ECSA    N+ +        +++    L      LK ++ +   P++   A GCC
Sbjct:  590 LWDTAGQERYHSLTRQLLRKAEGVVLMYDVTSQESFTHVR-YWLDCLQDAGV-EGVAMVLLGNKMDCEEERQVPTEAGRRLAQELGVSFGECSAALGHNILE-------PMMNLARSLKMQEDRLKASLAEVTHPQSTKRA-GCC 724          
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: YPT53_YEAST (GTP-binding protein YPT53 OS=Saccharomyces cerevisiae GN=YPT53 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.402e-12
Identity = 45/117 (38.46%), Postives = 60/117 (51.28%), Query Frame = 1
Query:    7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKV-----DKESERVVTKKEGI-NFAREYGCLFIECSAKTRVNVQQCFEELVLKI 339
            IWDTAGQERF  L   YYR AQ  ++V+DVT   +F    + W +E+       D +  LVGNK+     D E+E    K   + N       L+ E SAKT  N+ Q F+ L  K+
Sbjct:   65 IWDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQN-WVEELH-EKVGHDIVIALVGNKMDLLNNDDENENRAMKAPAVQNLCERENLLYFEASAKTGENIYQIFQTLGEKV 179          
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RRAS_MOUSE (Ras-related protein R-Ras OS=Mus musculus GN=Rras PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.402e-12
Identity = 44/150 (29.33%), Postives = 72/150 (48.00%), Query Frame = 1
Query:    7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKNIFKQKPPEADAAASGCC*FLLL 456
            I DTAGQE F  +   Y R   G ++V+ +  R +F  +  ++ + + +     D   +LVGNK D E++R V + E  +F+  +   + E SAK R+NV + FE+LV  +           +  ++      PP A     G C  +LL
Sbjct:   81 ILDTAGQEEFGAMREQYMRAGNGFLLVFAINDRQSFNEVGKLFTQILRV-KDRDDFPIVLVGNKADLENQRQVLRSEASSFSASHHMTYFEASAKLRLNVDEAFEQLVRAV-----------RKYQEQELPPSPPSAPRKKDGGCPCVLL 218          
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RRAS_HUMAN (Ras-related protein R-Ras OS=Homo sapiens GN=RRAS PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.402e-12
Identity = 45/150 (30.00%), Postives = 70/150 (46.67%), Query Frame = 1
Query:    7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKNIFKQKPPEADAAASGCC*FLLL 456
            I DTAGQE F  +   Y R   G ++V+ +  R +F  +  ++ + + +     D   +LVGNK D ES+R V + E   F   +   + E SAK R+NV + FE+LV  +           +  ++      PP A     G C  +LL
Sbjct:   81 ILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRV-KDRDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAV-----------RKYQEQELPPSPPSAPRKKGGGCPCVLL 218          
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAS2_YEAST (Ras-like protein 2 OS=Saccharomyces cerevisiae GN=RAS2 PE=1 SV=4)

HSP 1 Score: 73.559 bits (179), Expect = 1.402e-12
Identity = 37/113 (32.74%), Postives = 65/113 (57.52%), Query Frame = 1
Query:    7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 345
            I DTAGQE +  +   Y R  +G ++VY +T + +   L   + + + +  T+   I ++VGNK D E+E+ V+ ++G+N A++    F+E SAK  +NV++ F  L   + D
Sbjct:   62 ILDTAGQEEYSAMREQYMRNGEGFLLVYSITSKSSLDELMTYYQQILRVKDTDYVPI-VVVGNKSDLENEKQVSYQDGLNMAKQMNAPFLETSAKQAINVEEAFYTLARLVRD 173          
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RABZ_DICDI (Ras-related protein RabZ OS=Dictyostelium discoideum GN=rabZ PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.402e-12
Identity = 43/113 (38.05%), Postives = 63/113 (55.75%), Query Frame = 1
Query:   10 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDT 348
            +DTAGQE+FR L+ SYYR A GI++ YD+  + TF N+   W +E+   +     I L++ NK D   +RVV       FA +     IE SAK  + V++ F +L  +I  T
Sbjct:  105 YDTAGQEKFRALSQSYYRCADGIMLFYDIANQKTFDNVGR-WLEEVHRLAGPNVPI-LIIANKCDLNEKRVVNFNNAKKFADDKNIPIIEVSAKESLGVEEAFIKLASEINKT 215          
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB9A_MOUSE (Ras-related protein Rab-9A OS=Mus musculus GN=Rab9a PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.402e-12
Identity = 51/149 (34.23%), Postives = 78/149 (52.35%), Query Frame = 1
Query:    7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIK---LLVGNKVDKESERVVTKKEGINFAREYGCL-FIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 441
            IWDTAGQERFR+L + +YRG+   ++ + V    +F NLS+ W KE   Y+  ++      +++GNK D + ER V+ +E   + ++ G   + E SAK   NV   FEE V +IL T        +    N+ ++  P      S CC
Sbjct:   60 IWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSN-WKKEFIYYADVKEPESFPFVILGNKTDIK-ERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSEHLIQTDTVNLHRKPKPN-----SSCC 201          
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RIT1_HUMAN (GTP-binding protein Rit1 OS=Homo sapiens GN=RIT1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.832e-12
Identity = 47/130 (36.15%), Postives = 66/130 (50.77%), Query Frame = 1
Query:    7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI--LDTPSLLAEGSKGLKKN 390
            I DTAGQ  F  +   Y R  +G I+ Y +T R +F  + + + + I       D   +LVGNK D +  R VTK+EG+  ARE+ C F E SA  R  +   F  LV +I   +  ++LA   K   KN
Sbjct:   73 ILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVRE-FKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRKEKEAVLAMEKKSKPKN 201          
The following BLAST results are available for this feature:
BLAST of CK932608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 477
Match NameE-valueIdentityDescription
RALA_MOUSE8.222e-1333.10Ras-related protein Ral-A OS=Mus musculus GN=Rala ... [more]
RAB7B_DICDI8.222e-1337.17Ras-related protein Rab-7B OS=Dictyostelium discoi... [more]
RAB44_MOUSE8.222e-1332.41Ras-related protein Rab-44 OS=Mus musculus GN=Rab4... [more]
YPT53_YEAST1.402e-1238.46GTP-binding protein YPT53 OS=Saccharomyces cerevis... [more]
RRAS_MOUSE1.402e-1229.33Ras-related protein R-Ras OS=Mus musculus GN=Rras ... [more]
RRAS_HUMAN1.402e-1230.00Ras-related protein R-Ras OS=Homo sapiens GN=RRAS ... [more]
RAS2_YEAST1.402e-1232.74Ras-like protein 2 OS=Saccharomyces cerevisiae GN=... [more]
RABZ_DICDI1.402e-1238.05Ras-related protein RabZ OS=Dictyostelium discoide... [more]
RAB9A_MOUSE1.402e-1234.23Ras-related protein Rab-9A OS=Mus musculus GN=Rab9... [more]
RIT1_HUMAN1.832e-1236.15GTP-binding protein Rit1 OS=Homo sapiens GN=RIT1 P... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004531_G12 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932608 ID=CK932608; Name=CK932608; organism=Citrus sinensis; type=EST; length=778bp
GGGGCAATTTGGGATACAGCTGGTCAGGAGAGATTTCGGACATTGACTAG
TTCATACTACAGGGGTGCACAAGGCATCATTATGGTTTATGATGTTACAA
GGCGAGACACATTTACTAATCTTTCTGATGTATGGGCTAAGGAAATTGAC
TTATACTCAACAAACCAAGATTGTATCAAATTGCTCGTTGGAAACAAAGT
TGATAAGGAAAGTGAAAGGGTTGTGACAAAGAAAGAGGGCATAAACTTTG
CGAGGGAATATGGATGCCTTTTTATTGAATGCAGTGCTAAAACTCGTGTC
AACGTACAGCAGTGCTTTGAAGAGCTTGTTCTAAAGATTTTAGATACACC
AAGCCTCTTGGCGGAGGGATCCAAAGGTTTGAAGAAGAACATCTTTAAAC
AGAAGCCACCAGAAGCTGATGCAGCTGCAAGCGGTTGTTGCTGATTCTTA
TTACTTGCTGAATTTCCCTCACATCACGTCCTACCCTCTAACTTAAGTGT
GGTCTTTCCTCTTTTAATCCCAAAGAAATTATTTATTTTATTATAGTTTA
TTATGAACTGCAGTGCTGATTACATGTAATATAGTAATGCTGTGATTCAT
GCTGCCTCTCCAGACTCATTTTGTCGACATTGAACAACATTTCATTCCTT
TTTTCAAGTCTTGAAATAGTCACTGATATGGCCGTACAGATTTGATCTCC
ATTTGCTCTTAAATCTTACAATGGTAATAGAGGTGAATTTGAGTGAGGTA
AAAAAAAAAAAAAAAAAAAAAAAAAAAA
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