CK932608

Overview
NameCK932608
Unique NameCK932608
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4140 contig Csv1_Contig4140:229..1005. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RASK_MONDO (GTPase KRas OS=Monodelphis domestica GN=KRAS PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.696e-11
Identity = 43/127 (33.86%), Postives = 64/127 (50.39%), Query Frame = 1
Query:    7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKK 387
            I DTAGQE +  +   Y R  +G + V+ +    +F ++   + ++I     ++D   +LVGNK D  S R V  K+  + AR YG  FIE SAKTR      F  LV +I      +++  K  KK
Sbjct:   55 ILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHH-YREQIKRVKDSEDVPMVLVGNKCDLPS-RTVDTKQAQDLARSYGIPFIETSAKTRQGGDDAFYTLVREIRKHKEKMSKDGKKKKK 179          
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAPB_DICDI (Ras-related protein rapB OS=Dictyostelium discoideum GN=rapB PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.696e-11
Identity = 37/112 (33.04%), Postives = 60/112 (53.57%), Query Frame = 1
Query:    7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREY-GCLFIECSAKTRVNVQQCFEELVLKI 339
            + DTAG E    +   Y + A+G I+VY +  + TF  + D+  +++      ++   +LVGNK+D ++ R V+  EG   A  Y  C F E S+K R+NV   F  +V +I
Sbjct:   74 VLDTAGSEVLVAMRELYMKNAEGFILVYSILVKSTFLEIKDI-VEQLFRVKEEEEVPIVLVGNKIDLDAHREVSTNEGKQLANSYPNCDFWEASSKDRINVDNVFFSIVKRI 184          
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAN2_ORYSJ (GTP-binding nuclear protein Ran-2 OS=Oryza sativa subsp. japonica GN=RAN2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.696e-11
Identity = 49/146 (33.56%), Postives = 77/146 (52.74%), Query Frame = 1
Query:   10 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKK-----NIFKQKPPEADAAAS 432
            WDTAGQE+F  L   YY   Q  I+++DVT R T+ N+   W +  DL    ++   +L GNKVD ++ +V  K+  + F R+    + E SAK+  N ++ F  L  K+   P+L    +  LK      ++  Q+  EA+ AA+
Sbjct:   67 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNV-PTWHR--DLCRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVEAVALKPPEVPIDLAMQQQHEAELAAA 207          
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAN2_ORYSI (GTP-binding nuclear protein Ran-2 OS=Oryza sativa subsp. indica GN=RAN2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.696e-11
Identity = 49/146 (33.56%), Postives = 77/146 (52.74%), Query Frame = 1
Query:   10 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKK-----NIFKQKPPEADAAAS 432
            WDTAGQE+F  L   YY   Q  I+++DVT R T+ N+   W +  DL    ++   +L GNKVD ++ +V  K+  + F R+    + E SAK+  N ++ F  L  K+   P+L    +  LK      ++  Q+  EA+ AA+
Sbjct:   67 WDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNV-PTWHR--DLCRVCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVEAVALKPPEVPIDLAMQQQHEAELAAA 207          
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAC11_ARATH (Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana GN=ARAC11 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.696e-11
Identity = 40/137 (29.20%), Postives = 67/137 (48.91%), Query Frame = 1
Query:    7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESER----------VVTKKEGINFAREYGC-LFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLK 384
            +WDTAGQE +  L    YRGA   I+ + +  + ++ N+S  W  E+  Y+     +  LVG K+D   ++           +T  +G    ++ G   +IECS+KT+ NV+  F+  +  +L  P    + SK  K
Sbjct:   58 LWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIV--LVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQPPKQKKKKSKAQK 192          
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: DJC27_PONAB (DnaJ homolog subfamily C member 27 OS=Pongo abelii GN=DNAJC27 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.696e-11
Identity = 37/117 (31.62%), Postives = 64/117 (54.70%), Query Frame = 1
Query:    7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVW----AKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 345
            I+D AG   F  + + +Y+  QG+I+VYDV ++D+F  L D W     +E+  +   ++ I ++  NK+D    R V + EG  +A   G L+ E SA+T   + + F+   + I+D
Sbjct:   69 IFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDAL-DAWLAEMKQELGPHGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYISIVD 184          
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: DJC27_HUMAN (DnaJ homolog subfamily C member 27 OS=Homo sapiens GN=DNAJC27 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.696e-11
Identity = 37/117 (31.62%), Postives = 64/117 (54.70%), Query Frame = 1
Query:    7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVW----AKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 345
            I+D AG   F  + + +Y+  QG+I+VYDV ++D+F  L D W     +E+  +   ++ I ++  NK+D    R V + EG  +A   G L+ E SA+T   + + F+   + I+D
Sbjct:   69 IFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKDSFDAL-DAWLAEMKQELGPHGNMENIIFVVCANKIDCTKHRCVDESEGRLWAESKGFLYFETSAQTGEGINEMFQTFYISIVD 184          
The following BLAST results are available for this feature:
BLAST of CK932608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 477
Match NameE-valueIdentityDescription
RASK_MONDO7.696e-1133.86GTPase KRas OS=Monodelphis domestica GN=KRAS PE=1 ... [more]
RAPB_DICDI7.696e-1133.04Ras-related protein rapB OS=Dictyostelium discoide... [more]
RAN2_ORYSJ7.696e-1133.56GTP-binding nuclear protein Ran-2 OS=Oryza sativa ... [more]
RAN2_ORYSI7.696e-1133.56GTP-binding nuclear protein Ran-2 OS=Oryza sativa ... [more]
RAC11_ARATH7.696e-1129.20Rac-like GTP-binding protein ARAC11 OS=Arabidopsis... [more]
DJC27_PONAB7.696e-1131.62DnaJ homolog subfamily C member 27 OS=Pongo abelii... [more]
DJC27_HUMAN7.696e-1131.62DnaJ homolog subfamily C member 27 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004531_G12 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932608 ID=CK932608; Name=CK932608; organism=Citrus sinensis; type=EST; length=778bp
GGGGCAATTTGGGATACAGCTGGTCAGGAGAGATTTCGGACATTGACTAG
TTCATACTACAGGGGTGCACAAGGCATCATTATGGTTTATGATGTTACAA
GGCGAGACACATTTACTAATCTTTCTGATGTATGGGCTAAGGAAATTGAC
TTATACTCAACAAACCAAGATTGTATCAAATTGCTCGTTGGAAACAAAGT
TGATAAGGAAAGTGAAAGGGTTGTGACAAAGAAAGAGGGCATAAACTTTG
CGAGGGAATATGGATGCCTTTTTATTGAATGCAGTGCTAAAACTCGTGTC
AACGTACAGCAGTGCTTTGAAGAGCTTGTTCTAAAGATTTTAGATACACC
AAGCCTCTTGGCGGAGGGATCCAAAGGTTTGAAGAAGAACATCTTTAAAC
AGAAGCCACCAGAAGCTGATGCAGCTGCAAGCGGTTGTTGCTGATTCTTA
TTACTTGCTGAATTTCCCTCACATCACGTCCTACCCTCTAACTTAAGTGT
GGTCTTTCCTCTTTTAATCCCAAAGAAATTATTTATTTTATTATAGTTTA
TTATGAACTGCAGTGCTGATTACATGTAATATAGTAATGCTGTGATTCAT
GCTGCCTCTCCAGACTCATTTTGTCGACATTGAACAACATTTCATTCCTT
TTTTCAAGTCTTGAAATAGTCACTGATATGGCCGTACAGATTTGATCTCC
ATTTGCTCTTAAATCTTACAATGGTAATAGAGGTGAATTTGAGTGAGGTA
AAAAAAAAAAAAAAAAAAAAAAAAAAAA
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