CK932644

Overview
NameCK932644
Unique NameCK932644
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932644 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.828e-24
Identity = 59/144 (40.97%), Postives = 86/144 (59.72%), Query Frame = 2
Query:  287 FTFKQLHSATGGFSKSNVVGHGGFGLVYQGVLSNGRKVAIKLMDQA--GKQGEDEFKMEVELLGRLRSPYLLALLGYCSDR-RKLLVYDYMANGGLQEHLYPANGPNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRD 709
            +T   L  AT  FS+ N++G G  G VY+    NG+ +AIK +D A    Q ED F   V  + RLR P ++ L GYC++  ++LLVY+Y+ NG L + L+  N   S+   L W  R+++AL  AK LE+LHE C P ++HR+
Sbjct:  383 YTVSSLQVATNSFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLH-TNDDRSM--NLTWNARVKVALGTAKALEYLHEVCLPSIVHRN 523          
BLAST of CK932644 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.918e-24
Identity = 57/142 (40.14%), Postives = 84/142 (59.15%), Query Frame = 2
Query:  287 FTFKQLHSATGGFSKSNVVGHGGFGLVYQGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGPNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRD 709
            FT+ +L SAT  F  SN +G GGFG VY+G L++GR+VA+KL+    +QG+ +F  E+  +  ++   L+ L G C +   +LLVY+Y+ NG L + L+           LDW TR  I L  A+GL +LHE     ++HRD
Sbjct:  681 FTYSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQGKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALF-----GEKTLHLDWSTRYEICLGVARGLVYLHEEARLRIVHRD 817          
BLAST of CK932644 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.918e-24
Identity = 57/143 (39.86%), Postives = 84/143 (58.74%), Query Frame = 2
Query:  284 VFTFKQLHSATGGFSKSNVVGHGGFGLVYQGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGPNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRD 709
            +FT+ +L SAT  F  SN +G GGFG VY+G L++GR VA+KL+    +QG+ +F  E+  +  +    L+ L G C +   ++LVY+Y+ NG L + L+           LDW TR  I L  A+GL +LHE  S  ++HRD
Sbjct:  681 IFTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALF-----GDKTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRD 818          
BLAST of CK932644 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 8.918e-24
Identity = 63/162 (38.89%), Postives = 93/162 (57.41%), Query Frame = 2
Query:  257 EVTTDNGLQVFTFKQLHSATGGFSKSNVVGHGGFGLVYQGVLSN----------GRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYC-SDRRKLLVYDYMANGGLQEHLYPANGPNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRD 709
            E+  +  L+ F+  +L SAT  F   +VVG GGFG V++G +            G  +A+K ++Q G QG  E+  E+  LG+L  P L+ L+GYC  +  +LLVY++M  G L+ HL+      +    L W TR+R+AL AA+GL FLH +  P VI+RD
Sbjct:   46 EILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRR---GTFYQPLSWNTRVRMALGAARGLAFLH-NAQPQVIYRD 203          
BLAST of CK932644 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.918e-24
Identity = 63/162 (38.89%), Postives = 93/162 (57.41%), Query Frame = 2
Query:  257 EVTTDNGLQVFTFKQLHSATGGFSKSNVVGHGGFGLVYQGVL----------SNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGPNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRD 709
            E+ +   L+ FTF +L +AT  F + N++G GGFG V++G +           +G  VA+K +   G QG  E+  EV  LG+L  P L+ L+GYC++   +LLVY++M  G L+ HL+        A  L W  R+++A+ AAKGL FLHE     VI+RD
Sbjct:   64 EILSSPNLKAFTFNELKNATKNFRQDNLLGEGGFGCVFKGWIDQTSLTASRPGSGIVVAVKQLKPEGFQGHKEWLTEVNYLGQLSHPNLVLLVGYCAEGENRLLVYEFMPKGSLENHLFRRG-----AQPLTWAIRMKVAVGAAKGLTFLHE-AKSQVIYRD 219          
BLAST of CK932644 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.165e-23
Identity = 62/162 (38.27%), Postives = 89/162 (54.94%), Query Frame = 2
Query:  227 REEKGESGKLEVTTDNGLQVFTFKQLHSATGGFSKSNVVGHGGFGLVYQGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGPNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRD 709
            R +K +  K     D     FT +Q+ +AT  F  +  +G GGFG VY+G LS G+ +A+K +    +QG  EF  E+ ++  L+ P L+ L G C +  +L LVY+Y+ N  L   L+  +   S   KLDW TR +I L  AKGL FLHE     ++HRD
Sbjct:  646 RRDKNDIDKELRGLDLQTGTFTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKD--ESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRD 805          
BLAST of CK932644 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.165e-23
Identity = 61/142 (42.96%), Postives = 86/142 (60.56%), Query Frame = 2
Query:  287 FTFKQLHSATGGFSKSNVVGHGGFGLVYQGVLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSD-RRKLLVYDYMANGGLQEHLYPANGPNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRD 709
            FT + +  AT  +    ++G GGFG VY+G L +G++VA+K+      QG  EF  E+ LL  ++   L+ LLGYC++  +++LVY +M+NG L + LY   G  S    LDW TRL IAL AA+GL +LH      VIHRD
Sbjct:  586 FTLEYIEQATEQYK--TLIGEGGFGSVYRGTLDDGQEVAVKVRSSTSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLY---GEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRD 722          
BLAST of CK932644 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.165e-23
Identity = 62/143 (43.36%), Postives = 84/143 (58.74%), Query Frame = 2
Query:  287 FTFKQLHSATGGFSKSNVVGHGGFGLVYQG-VLSNGRKVAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRK-LLVYDYMANGGLQEHLYPANGPNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRD 709
            F ++ L+ AT GF ++ VVG GGFG+VY+G + S+  ++A+K +     QG  EF  E+E LGRLR   L+ L G+C  R   LL+YDY+ NG L   LY  + P    + L W  R +IA   A GL +LHE     VIHRD
Sbjct:  351 FRYRDLYKATEGFKENRVVGTGGFGIVYRGNIRSSSDQIAVKKITPNSMQGVREFVAEIESLGRLRHKNLVNLQGWCKHRNDLLLIYDYIPNGSLDSLLY--SKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRD 491          
BLAST of CK932644 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.521e-23
Identity = 56/143 (39.16%), Postives = 89/143 (62.24%), Query Frame = 2
Query:  287 FTFKQLHSATGGFSKSNVVGHGGFGLVYQGVLSNGRK-VAIKLMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYCSDRRKL-LVYDYMANGGLQEHLYPANGPNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRD 709
            F+  ++ SAT  F +  ++G GGFG VY+G +  G   VA+K ++    QG  EF  E+E+L +LR  +L++L+GYC D  ++ LVY+YM +G L++HL+  +  +     L W+ RL I + AA+GL++LH      +IHRD
Sbjct:  513 FSIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYCDDDNEMVLVYEYMPHGTLKDHLFRRDKASD--PPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRD 653          
BLAST of CK932644 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.521e-23
Identity = 62/146 (42.47%), Postives = 90/146 (61.64%), Query Frame = 2
Query:  278 LQVFTFKQLHSATGGFSKSNVVGHGGFGLVYQGVLSNGRKVAIK-LMDQAGKQGEDEFKMEVELLGRLRSPYLLALLGYC-SDRRKLLVYDYMANGGLQEHLYPANGPNSVASKLDWETRLRIALEAAKGLEFLHEHCSPPVIHRD 709
            L+ F+ ++L  AT  FS  N++G GGFG VY+G L++G  VA+K L ++    GE +F+ EVE++       LL L G+C +   +LLVY YMANG +   L     P+ +   L W  R +IAL +A+GL +LH+HC P +IHRD
Sbjct:  290 LKRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPPSQL--PLAWSIRQQIALGSARGLSYLHDHCDPKIIHRD 432          
The following BLAST results are available for this feature:
BLAST of CK932644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
SRF8_ARATH6.828e-2440.97Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
Y5614_ARATH8.918e-2440.14Probable LRR receptor-like serine/threonine-protei... [more]
Y1561_ARATH8.918e-2439.86Probable LRR receptor-like serine/threonine-protei... [more]
NAK_ARATH8.918e-2438.89Probable serine/threonine-protein kinase NAK OS=Ar... [more]
APK2A_ARATH8.918e-2438.89Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
Y1765_ARATH1.165e-2338.27Probable LRR receptor-like serine/threonine-protei... [more]
NORK_MEDTR1.165e-2342.96Nodulation receptor kinase OS=Medicago truncatula ... [more]
LRKA3_ARATH1.165e-2343.36Lectin-domain containing receptor kinase A4.3 OS=A... [more]
Y5389_ARATH1.521e-2339.16Probable receptor-like protein kinase At5g38990 OS... [more]
SERK2_ARATH1.521e-2342.47Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004531_D06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932644 ID=CK932644; Name=CK932644; organism=Citrus sinensis; type=EST; length=710bp
CTTATTCAAACCCTCCATTTCTCTCTCTTTGCTTCTTATTCTTCCATTCT
CTTAATAAACAGAAATGGAAGGAGACGATGAGTACAGAAGAAAAGAGCGC
GTTGCCTTGGTGGTTATTGTGGTGGTTGCCTCACTAGCCTTGGCTTCTTT
GCTCGTCGCTTTTAGCTACTACTGCTACATACGTAACAAGGTCTCTAAGC
GCTTAAATACCCCCAAAAGTGTTAATCGTGAGGAGAAAGGTGAGTCGGGA
AAATTGGAAGTTACTACTGATAATGGACTTCAGGTGTTCACTTTCAAGCA
GCTGCATTCAGCTACTGGTGGTTTCAGCAAGTCGAATGTGGTTGGGCACG
GTGGTTTTGGGTTAGTGTACCAGGGAGTGCTTAGTAATGGGAGGAAAGTT
GCAATTAAGTTGATGGATCAAGCAGGAAAGCAGGGAGAAGATGAATTTAA
GATGGAGGTGGAGTTGCTTGGTCGTCTACGGTCACCATATCTGCTGGCTC
TGCTTGGATATTGTTCTGATCGTCGTAAATTGCTTGTGTATGATTACATG
GCAAATGGTGGCCTACAAGAACATCTGTATCCTGCTAATGGTCCCAACTC
AGTTGCCTCCAAATTGGACTGGGAAACCCGACTTAGAATAGCTCTTGAAG
CTGCTAAAGGTTTGGAATTTCTCCATGAGCATTGTAGCCCCCCTGTGATT
CACAGAGATT
back to top