CK932666

Overview
NameCK932666
Unique NameCK932666
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length792
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A_HYDAT (Elongation factor 1-alpha OS=Hydra attenuata PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.059e-39
Identity = 77/107 (71.96%), Postives = 92/107 (85.98%), Query Frame = 2
Query:   14 ASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDK 334
            A++F +QVII+NHPG+I  GY PVLDCHT+HIA KFAE+L KIDRRSGK +E EPK +K+GDA  + +IP+K M VE+FS+YPPLGRFAVRDMRQTVAVGVIK VDK
Sbjct:  339 AASFKAQVIILNHPGEIHAGYQPVLDCHTAHIACKFAELLEKIDRRSGKVIETEPKMVKSGDAAIINLIPSKGMCVESFSQYPPLGRFAVRDMRQTVAVGVIKEVDK 445          
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A_CRYPV (Elongation factor 1-alpha OS=Cryptosporidium parvum PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.082e-39
Identity = 74/112 (66.07%), Postives = 93/112 (83.04%), Query Frame = 2
Query:    5 AKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 340
            AKG  +FT+QVI++NHPG+I NGY+PV+DCHT+HI+ KF  I  K+D+RSGK LE+ PK +K+GDA  V M P KP+ VE F++YPPLGRFAVRDM+QTVAVGVIKSV KK+
Sbjct:  318 AKGCEDFTAQVIVLNHPGEIKNGYSPVVDCHTAHISCKFQTITAKMDKRSGKVLEENPKLIKSGDAALVVMQPLKPLCVEAFTDYPPLGRFAVRDMKQTVAVGVIKSVTKKE 429          
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A_PLAFK (Elongation factor 1-alpha OS=Plasmodium falciparum (isolate K1 / Thailand) GN=MEF-1 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.025e-39
Identity = 73/112 (65.18%), Postives = 93/112 (83.04%), Query Frame = 2
Query:    5 AKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKD 340
            AKG S FT+QVII+NHPG+I NGY P+LDCHTSHI+ KF  I +KID+RSGK +E+ PK +K+GD+  V + P KPMVVETF+EYPPLGRFA+RDMRQT+AVG+I  + +K+
Sbjct:  320 AKGCSKFTAQVIILNHPGEIKNGYTPLLDCHTSHISCKFLNIDSKIDKRSGKVVEENPKAIKSGDSALVSLEPKKPMVVETFTEYPPLGRFAIRDMRQTIAVGIINQLKRKN 431          
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A_ENTHI (Elongation factor 1-alpha OS=Entamoeba histolytica PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.025e-39
Identity = 74/109 (67.89%), Postives = 94/109 (86.24%), Query Frame = 2
Query:    5 AKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELE-KEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 328
            A G  +FT+QVI+MNHPGQI  GY PVLDCHTSHIA KF E+L+KIDRR+GK +E  EP+++KNGD+  VK++PTKP+ VE F+++PPLGRFAVRDM+QTVAVGV+K+V
Sbjct:  320 AVGCEDFTAQVIVMNHPGQIRKGYTPVLDCHTSHIACKFEELLSKIDRRTGKSMEGGEPEYIKNGDSALVKIVPTKPLCVEEFAKFPPLGRFAVRDMKQTVAVGVVKAV 428          
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A1_EUPCR (Elongation factor 1-alpha 1 OS=Euplotes crassus GN=EFA1 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.920e-37
Identity = 71/111 (63.96%), Postives = 87/111 (78.38%), Query Frame = 2
Query:    5 AKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 337
            A    +F S  I+MNHPG+I  GY PV+DCHT+HIA KF E+LTK D+RSGK  E+ PKFLK GDAG +++ P+KP+ VETF+ Y PLGRFAVRDMRQTVAVGVI+ + KK
Sbjct:  322 ATDTESFVSHTIVMNHPGEIKAGYTPVIDCHTAHIACKFEELLTKADKRSGKMTEENPKFLKAGDAGLIRLSPSKPLCVETFATYAPLGRFAVRDMRQTVAVGVIQEIKKK 432          
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A_DICDI (Elongation factor 1-alpha OS=Dictyostelium discoideum GN=eef1a1 PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 7.104e-36
Identity = 74/113 (65.49%), Postives = 89/113 (78.76%), Query Frame = 2
Query:   23 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPK---FLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSGA 352
            F +QVI++NHPGQI  GY+PVLDCHT+HIA KF EI+ K+DRR+G  + KE      LKNGDA  V++ P++PM VE+F+EYPPLGRFAVRDMRQTVAVGVIKS  KK P  A
Sbjct:  328 FVAQVIVLNHPGQIHAGYSPVLDCHTAHIACKFTEIVDKVDRRTGAVVAKEGTAAVVLKNGDAAMVELTPSRPMCVESFTEYPPLGRFAVRDMRQTVAVGVIKSTVKKAPGKA 440          
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A1_XENLA (Elongation factor 1-alpha OS=Xenopus laevis PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 7.855e-35
Identity = 69/113 (61.06%), Postives = 88/113 (77.88%), Query Frame = 2
Query:   14 ASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSGA 352
            AS+FT+QVII+NHPG I  GY+PV+DCHT+HI  +FAE+  KIDRR+GK+LE  P  LK+GDA  + + P KP  VE F +YPPLGRFA RD++QTVAVGV+KSV+ K  + A
Sbjct:  340 ASSFTAQVIILNHPGFIKAGYSPVIDCHTAHITCQFAELQEKIDRRTGKKLEDNPGLLKSGDAAIITLKPIKPFCVERFFDYPPLGRFAARDLKQTVAVGVVKSVEHKAGAAA 452          
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A_SPOFR (Elongation factor 1-alpha (Fragment) OS=Spodoptera frugiperda PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.300e-33
Identity = 62/93 (66.67%), Postives = 78/93 (83.87%), Query Frame = 2
Query:    8 KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVR 286
            KGA++FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAEI  K+DRR+GK  E  PK +K+GDA  V ++P+KP+ VE+F E+PPLGRFAVR
Sbjct:  321 KGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413          
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A_HELZE (Elongation factor 1-alpha (Fragment) OS=Heliothis zea PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.300e-33
Identity = 62/93 (66.67%), Postives = 78/93 (83.87%), Query Frame = 2
Query:    8 KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVR 286
            KGA++FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAEI  K+DRR+GK  E  PK +K+GDA  V ++P+KP+ VE+F E+PPLGRFAVR
Sbjct:  321 KGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413          
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A_HELVI (Elongation factor 1-alpha (Fragment) OS=Heliothis virescens PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.300e-33
Identity = 62/93 (66.67%), Postives = 78/93 (83.87%), Query Frame = 2
Query:    8 KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVR 286
            KGA++FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAEI  K+DRR+GK  E  PK +K+GDA  V ++P+KP+ VE+F E+PPLGRFAVR
Sbjct:  321 KGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413          
The following BLAST results are available for this feature:
BLAST of CK932666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 167
Match NameE-valueIdentityDescription
EF1A_HYDAT1.059e-3971.96Elongation factor 1-alpha OS=Hydra attenuata PE=2 ... [more]
EF1A_CRYPV3.082e-3966.07Elongation factor 1-alpha OS=Cryptosporidium parvu... [more]
EF1A_PLAFK4.025e-3965.18Elongation factor 1-alpha OS=Plasmodium falciparum... [more]
EF1A_ENTHI4.025e-3967.89Elongation factor 1-alpha OS=Entamoeba histolytica... [more]
EF1A1_EUPCR4.920e-3763.96Elongation factor 1-alpha 1 OS=Euplotes crassus GN... [more]
EF1A_DICDI7.104e-3665.49Elongation factor 1-alpha OS=Dictyostelium discoid... [more]
EF1A1_XENLA7.855e-3561.06Elongation factor 1-alpha OS=Xenopus laevis PE=1 S... [more]
EF1A_SPOFR3.300e-3366.67Elongation factor 1-alpha (Fragment) OS=Spodoptera... [more]
EF1A_HELZE3.300e-3366.67Elongation factor 1-alpha (Fragment) OS=Heliothis ... [more]
EF1A_HELVI3.300e-3366.67Elongation factor 1-alpha (Fragment) OS=Heliothis ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004531_A07 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932666 ID=CK932666; Name=CK932666; organism=Citrus sinensis; type=EST; length=792bp
GGGCGCCAAGGGGGCATCCAACTTCACCTCCCAAGTTATCATCATGAACC
ACCCTGGCCAGATTGGAAACGGTTATGCACCTGTTCTTGATTGCCACACT
TCCCACATAGCTGTCAAGTTTGCTGAAATCTTGACCAAGATTGACAGGCG
ATCTGGTAAGGAGCTGGAGAAGGAGCCCAAATTCTTAAAGAATGGTGATG
CTGGGTTTGTTAAGATGATTCCCACCAAGCCTATGGTTGTGGAAACTTTC
TCCGAATATCCCCCACTTGGTCGTTTTGCTGTGAGAGACATGCGCCAGAC
CGTCGCTGTTGGAGTCATCAAGAGCGTGGACAAGAAGGATCCATCTGGAG
CCAAGGTAACCAAGTCTGCTGTGAAGAAGAAGTGAACTGTGCTGGTATCT
TTGTCTGCAAGTAATGTCTATAGGCGTCATCACAATAAAGATTGTGTTCT
TTTTAGGCATAAATGTGTTGGATGTTTGGGTCGTCAATTTGCTGGTTATA
ATTACAATTCGTCACCATCGACAAGAGACTTTTGTTCACAGAACTGGGTT
CTTGATCGGCGGTGGCGAGATTACTGTATTGAGTCTATTTTTGTTGTCCA
TGTCATGTTCAAACTTGGATATTTTGTAAGCAGCTCAGGAGTTTTAGGTC
TCTGCTGAGCTCCTTAAGATGTTGTTTGTTGATGTTTTATGTTCTATCTA
GTTTGCCATTTTCCNAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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