CK932681

Overview
NameCK932681
Unique NameCK932681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932681 vs. ExPASy Swiss-Prot
Match: NLTP1_ORYSI (Non-specific lipid-transfer protein 1 OS=Oryza sativa subsp. indica GN=LTP PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19
Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = 3
Query:   75 LVLVCLMGSAFVSTK---AQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 401
            LVLV L+ +  ++       +TC  V + + PC++Y   G   +  CC+GVR+L  AA +TADR+T C CLK A  GI       G AA +P KCG+++PY IS S DCSRV
Sbjct:    6 LVLVALVAALLLAAPHAAVAITCGQVNSAVGPCLTYARGGAGPSAACCSGVRSLKAAASTTADRRTACNCLKNAARGIK--GLNAGNAASIPSKCGVSVPYTISASIDCSRV 115          
BLAST of CK932681 vs. ExPASy Swiss-Prot
Match: NLTP1_ARATH (Non-specific lipid-transfer protein 1 OS=Arabidopsis thaliana GN=LTP1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19
Identity = 43/110 (39.09%), Postives = 71/110 (64.55%), Query Frame = 3
Query:   75 LVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 404
            L+L C++ +  +++ A ++C +V ++L+ CI YV  GG +   CC+GV+ L + A++T DRQ  C C++ A   +  +    G AAG+P  CG+NIPY+IS ST+C  V+
Sbjct:   10 LLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPACCSGVKNLNSIAKTTPDRQQACNCIQGAARALG-SGLNAGRAAGIPKACGVNIPYKISTSTNCKTVR 118          
BLAST of CK932681 vs. ExPASy Swiss-Prot
Match: NLTP_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris GN=IWF1' PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.981e-19
Identity = 47/111 (42.34%), Postives = 71/111 (63.96%), Query Frame = 3
Query:   69 CILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 401
            C LV+ C+M +A ++    +TC  V + L+PCI Y+      +  CC G+++L +AA S ADR+T CTCLK A + I    Y  G AA LP +CG+++PY ISP+T+C+ +
Sbjct:   11 CALVM-CMMVAAPLAEA--ITCGLVASKLAPCIGYLQGAPGPSAACCGGIKSLNSAAASPADRKTACTCLKSAATSIKGINY--GKAASLPRQCGVSVPYAISPNTNCNAI 116          
BLAST of CK932681 vs. ExPASy Swiss-Prot
Match: NLTP3_VITSX (Non-specific lipid-transfer protein P3 OS=Vitis sp. PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 6.506e-19
Identity = 44/92 (47.83%), Postives = 61/92 (66.30%), Query Frame = 3
Query:  126 VTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 401
            ++C  V   ++ CI+Y+   G +   CCNGV+ L N+A +T DR+T C CL  A   IS   +  GLAAGLP KCG++IPY+ISPST+C +V
Sbjct:    1 LSCGDVATQMASCINYLRGAGPLPAACCNGVKNLKNSATTTQDRRTACKCLISASKTISGVNF--GLAAGLPAKCGVSIPYKISPSTNCDQV 90          
BLAST of CK932681 vs. ExPASy Swiss-Prot
Match: NLTP2_ARATH (Non-specific lipid-transfer protein 2 OS=Arabidopsis thaliana GN=LTP2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.506e-19
Identity = 45/110 (40.91%), Postives = 67/110 (60.91%), Query Frame = 3
Query:   75 LVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 404
            +VL C++ +  ++  A ++C TV  +L+ CI+Y++ G  +T  CCNGV  L N A +T DRQ  C CL+ A   +         AAGLP  C +NIPY+IS ST+C+ V+
Sbjct:   10 MVLACMIVAGPITANALMSCGTVNGNLAGCIAYLTRGAPLTQGCCNGVTNLKNMASTTPDRQQACRCLQSAAKAVG-PGLNTARAAGLPSACKVNIPYKISASTNCNTVR 118          
BLAST of CK932681 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.497e-19
Identity = 51/110 (46.36%), Postives = 70/110 (63.64%), Query Frame = 3
Query:   78 VLVCLMGSAFVSTKAQ-VTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 404
            VL+C++    V+  A+ +TC  V   L+PC+ Y+   G +   CC GV+ L  +A++TADR+T CTCLK A + I      L  AAG+P  C +NIPY+ISPSTDCS VQ
Sbjct:   11 VLLCMV---VVAPHAEALTCGQVTAGLAPCLPYLQGRGPLG-GCCGGVKNLLGSAKTTADRKTACTCLKSAANAIK--GIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114          
BLAST of CK932681 vs. ExPASy Swiss-Prot
Match: NLTPA_BRAOT (Non-specific lipid-transfer protein A OS=Brassica oleracea var. italica GN=WAX9A PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.110e-18
Identity = 42/110 (38.18%), Postives = 68/110 (61.82%), Query Frame = 3
Query:   75 LVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 404
            LVL C++ +  ++    +TC TV ++++PCI Y++ GG +   CC GV  L + AR+T DRQ  C CL+ A   +       G AAG+P  CG+++P+ IS +T+C+ V+
Sbjct:   10 LVLACMIVAGPITANRALTCGTVNSNVAPCIGYITQGGTLPGACCTGVSKLNSMARTTPDRQQACRCLETAARALG-PNLNAGRAAGIPKACGVSVPFPISTNTNCNNVK 118          
BLAST of CK932681 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.449e-18
Identity = 51/110 (46.36%), Postives = 70/110 (63.64%), Query Frame = 3
Query:   78 VLVCLMGSAFVSTKAQ-VTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 404
            VL+C++    V+  A+ +TC  V   L+PC+ Y+   G +   CC GV+ L  +A++TADR+T CTCLK A + I      L  AAG+P  C +NIPY+ISPSTDCS VQ
Sbjct:   11 VLLCMV---VVAPHAEALTCGQVTAGLAPCLPYLQGRGPLG-GCCGGVKGLLGSAKTTADRKTACTCLKSAANAIK--GIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114          
BLAST of CK932681 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSJ (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. japonica GN=LTP110-A PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.893e-18
Identity = 46/116 (39.66%), Postives = 75/116 (64.66%), Query Frame = 3
Query:   63 TGCILVLVCLMGSAFVSTKAQ--VTCRTVVNDLSPCISYV-SYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 401
            T  ++ LV ++ +A V+ +A   V+C  V + ++PC+SYV     + +++CC+GVRTL   A S+ADR+T C+CLK   S  S+    +G AA +P KCG+++ + IS S DCS++
Sbjct:    7 TMALVALVAVVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMAS--SFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120          
BLAST of CK932681 vs. ExPASy Swiss-Prot
Match: NLTP3_ORYSI (Non-specific lipid-transfer protein 3 OS=Oryza sativa subsp. indica GN=LTP110-A PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.893e-18
Identity = 46/116 (39.66%), Postives = 75/116 (64.66%), Query Frame = 3
Query:   63 TGCILVLVCLMGSAFVSTKAQ--VTCRTVVNDLSPCISYV-SYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 401
            T  ++ LV ++ +A V+ +A   V+C  V + ++PC+SYV     + +++CC+GVRTL   A S+ADR+T C+CLK   S  S+    +G AA +P KCG+++ + IS S DCS++
Sbjct:    7 TMALVALVAVVAAAVVAERASAAVSCGDVTSSIAPCLSYVMGRESSPSSSCCSGVRTLNGKASSSADRRTACSCLKNMAS--SFRNLNMGNAASIPSKCGVSVAFPISTSVDCSKI 120          
The following BLAST results are available for this feature:
BLAST of CK932681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 75
Match NameE-valueIdentityDescription
NLTP1_ORYSI3.814e-1943.75Non-specific lipid-transfer protein 1 OS=Oryza sat... [more]
NLTP1_ARATH3.814e-1939.09Non-specific lipid-transfer protein 1 OS=Arabidops... [more]
NLTP_BETVU4.981e-1942.34Non-specific lipid-transfer protein OS=Beta vulgar... [more]
NLTP3_VITSX6.506e-1947.83Non-specific lipid-transfer protein P3 OS=Vitis sp... [more]
NLTP2_ARATH6.506e-1940.91Non-specific lipid-transfer protein 2 OS=Arabidops... [more]
NLTP1_SOLLC8.497e-1946.36Non-specific lipid-transfer protein 1 OS=Solanum l... [more]
NLTPA_BRAOT1.110e-1838.18Non-specific lipid-transfer protein A OS=Brassica ... [more]
NLTP1_SOLPN1.449e-1846.36Non-specific lipid-transfer protein 1 OS=Solanum p... [more]
NLTP3_ORYSJ1.893e-1839.66Non-specific lipid-transfer protein 3 OS=Oryza sat... [more]
NLTP3_ORYSI1.893e-1839.66Non-specific lipid-transfer protein 3 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004531_A01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932681 ID=CK932681; Name=CK932681; organism=Citrus sinensis; type=EST; length=704bp
GGGGGCTCAACACAAGCTAGGGTATCATAATGGCTAGCTCCGTAATGCTG
ATGAAACTTGTGACAGGCTGCATCTTGGTGCTTGTTTGCTTGATGGGCAG
TGCGTTCGTGTCCACCAAAGCACAAGTAACATGCCGCACGGTGGTGAATG
ACTTGTCTCCATGCATATCCTACGTGTCATACGGCGGGGCCGTGACGACG
AACTGTTGCAACGGAGTGAGGACACTCTACAATGCCGCTCGGTCCACAGC
TGACCGTCAGACCGTGTGTACGTGCTTGAAACAAGCTGTCAGTGGAATCT
CGTACACCAGGTACCAGCTCGGACTCGCAGCTGGACTTCCCGGCAAATGT
GGACTCAACATTCCTTACCAGATCAGCCCTTCTACTGACTGCAGCAGGGT
GCAGTGAGAATGATGAACTAGTAGCCATCAGTTATGACGCTGTGTGCTTG
GATAATTAAGCATGGGGTGAGAGAATAAGAGTGCTGCGCTTCTGTTTGAT
GGTGTGTTAGTGTTAAATAGAAGTTGTTAGCGTCATCTGGTGGGATTTAT
GTTGTCTCATGTTTTGTTAGGTTCTGTCCCAACCATAAGTACTAAAGAAT
AAGATTTTGTAAGTTACGTTTATGGAGTGACATTTTGTTATTATGTGTTA
TAATGAGCTCAGCACTTGGCTTTTCAAAAAAAAAAAAAAAAAAAAAAAAA
AAAA
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