CK932713

Overview
NameCK932713
Unique NameCK932713
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: DYNA_DICDI (Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.878e-36
Identity = 88/177 (49.72%), Postives = 111/177 (62.71%), Query Frame = 2
Query:  227 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKL---EEGSR--EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            M+ LI ++NK+Q     LG              LP I             LE+IVG+DFLPRGSGIVTRRPL+LQL  L   ++GS+  E+ EFLH P   F DF+ +R+EI  +TDR TG+ K IS+ PI+L IYSP+VVNLTL+DLPG+TKV V  QP  I Q I  MV +YI+K
Sbjct:    1 MDQLIPVINKLQDVFNTLGSDPL---------DLPQIVVVGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLILQLTHLPIADDGSQTQEWGEFLHKPNDMFYDFSEIREEIIRDTDRMTGKNKGISAQPINLKIYSPHVVNLTLVDLPGITKVPVGDQPTDIEQQIRRMVMAYIKK 168          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: VPS1_SCHPO (Vacuolar protein sorting-associated protein 1 OS=Schizosaccharomyces pombe GN=vps1 PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 8.665e-33
Identity = 85/188 (45.21%), Postives = 111/188 (59.04%), Query Frame = 2
Query:  233 NLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL------------------HKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            +LI +VN++Q A + +G       +  L D LP I             LE+IVG+DFLPRG+GIVTRRPLVLQL                   K +  S E+ EFLH+P ++F +F  +R+EI  ET+ +TG+   ISSVPI+L IYSP+V+ LTL+DLPGLTKV V  QP  I + I  MV  YI K
Sbjct:    4 SLIKVVNQLQEAFSTVG-------VQNLID-LPQITVVRSQSSGKSSVLENIVGRDFLPRGTGIVTRRPLVLQLINRPSASGKNEETTTDSDGKDQNNSSEWGEFLHLPGQKFFEFEKIREEIVRETEEKTGKNVGISSVPIYLRIYSPHVLTLTLVDLPGLTKVPVGDQPRDIEKQIREMVLKYISK 183          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: VPS1_YEAST (Vacuolar protein sorting-associated protein 1 OS=Saccharomyces cerevisiae GN=VPS1 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.132e-32
Identity = 87/212 (41.04%), Postives = 111/212 (52.36%), Query Frame = 2
Query:  230 ENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL-----------------------------------------HKLEEGSREYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            E+LIS +NK+Q A   LG   ++         LP I             LE+IVG+DFLPRG+GIVTRRPLVLQL                                          + E+   E+ EFLH+P K+F +F  +RKEI  ETD+ TG    ISSVPI+L IYSP+V+ LTL+DLPGLTKV V  QP  I + I++M+  YI K
Sbjct:    3 EHLISTINKLQDALAPLGGGSQSPI------DLPQITVVGSQSSGKSSVLENIVGRDFLPRGTGIVTRRPLVLQLINRRPKKSEHAKVNQTANELIDLNINDDDKKKDESGKHQNEGQSEDNKEEWGEFLHLPGKKFYNFDEIRKEIVKETDKVTGANSGISSVPINLRIYSPHVLTLTLVDLPGLTKVPVGDQPPDIERQIKDMLLKYISK 208          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: DNM1L_DANRE (Dynamin-1-like protein OS=Danio rerio GN=dnm1l PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.335e-32
Identity = 80/182 (43.96%), Postives = 106/182 (58.24%), Query Frame = 2
Query:  227 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSR------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYI 736
            ME LI ++NK+Q     +G    A  +      LP IA            LES+VG+D LPRG+GIVTRRPL+LQL  ++   R            E+ +FLH   K +TDF  +R+EI++ET+R +G  K IS  PIHL I+SP+VVNLTL+DLPG+TKV V  QP  I   I  ++  YI
Sbjct:    1 MEALIPVINKLQDVFNTVG----ADII-----QLPQIAVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVDPEDRRKTSEENGVDGEEWGKFLHTKNKIYTDFDEIRQEIENETERVSGNNKGISDEPIHLKIFSPHVVNLTLVDLPGITKVPVGDQPKDIELQIRELILKYI 173          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: DNM1L_HUMAN (Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.134e-31
Identity = 80/183 (43.72%), Postives = 106/183 (57.92%), Query Frame = 2
Query:  227 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL-HKLEEGSR------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYI 736
            ME LI ++NK+Q     +G    A  +      LP I             LES+VG+D LPRG+GIVTRRPL+LQL H  +E  R            E+ +FLH   K +TDF  +R+EI++ET+R +G  K +S  PIHL I+SPNVVNLTL+DLPG+TKV V  QP  I   I  ++  +I
Sbjct:    1 MEALIPVINKLQDVFNTVG----ADII-----QLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVSQEDKRKTTGEENGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFI 174          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: DNM1_YEAST (Dynamin-related protein DNM1 OS=Saccharomyces cerevisiae GN=DNM1 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.755e-31
Identity = 83/209 (39.71%), Postives = 116/209 (55.50%), Query Frame = 2
Query:  227 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKL--------------------------EEGSR-------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYI 736
            +E+LI  VNK+Q       D    S + TL   LP +A            LE++VG+DFLPRG+GIVTRRPLVLQL+ +                          E G++             E+ EFLHIP KRF DF  +++EI++ET R  G+ K IS +PI+L ++SP+V+NLTL+DLPG+TKV +  QP  I + I+N++  YI
Sbjct:    4 LEDLIPTVNKLQ-------DVMYDSGIDTL--DLPILAVVGSQSSGKSSILETLVGRDFLPRGTGIVTRRPLVLQLNNISPNSPLIEEDDNSVNPHDEVTKISGFEAGTKPLEYRGKERNHADEWGEFLHIPGKRFYDFDDIKREIENETARIAGKDKGISKIPINLKVFSPHVLNLTLVDLPGITKVPIGEQPPDIEKQIKNLILDYI 203          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: DRP3A_ARATH (Dynamin-related protein 3A OS=Arabidopsis thaliana GN=DRP3A PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 4.025e-30
Identity = 77/190 (40.53%), Postives = 107/190 (56.32%), Query Frame = 2
Query:  191 PSPEIST*LREKM-ENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQLHKLEEGSR-----EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYIEK 742
            PSP  ST     +  ++I +VNK+Q     LG     +        LP +             LE++VG+DFLPRG+ I TRRPLVLQL + +  +      E+ EF H+P  RF DF+ +R+EI+ ET+R  G  K ++   I L I SPNV+N+TL+DLPG+TKV V  QP  I   I  M+ SYI++
Sbjct:   21 PSPSSSTTNAAPLGSSVIPIVNKLQDIFAQLGSQSTIA--------LPQVVVVGSQSSGKSSVLEALVGRDFLPRGNDICTRRPLVLQLLQTKSRANGGSDDEWGEFRHLPETRFYDFSEIRREIEAETNRLVGENKGVADTQIRLKISSPNVLNITLVDLPGITKVPVGDQPSDIEARIRTMILSYIKQ 202          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: DNM1L_MOUSE (Dynamin-1-like protein OS=Mus musculus GN=Dnm1l PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 4.025e-30
Identity = 78/189 (41.27%), Postives = 105/189 (55.56%), Query Frame = 2
Query:  227 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL-HKLEEGSR------------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYI 736
            ME LI ++NK+Q     +G    A  +      LP I             LES+VG+D LPRG+G+VTRRPL+LQL H   E  R                  E+ +FLH   K +TDF  +R+EI++ET+R +G  K +S  PIHL ++SPNVVNLTL+DLPG+TKV V  QP  I   I  ++  +I
Sbjct:    1 MEALIPVINKLQDVFNTVG----ADII-----QLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGVVTRRPLILQLVHVSPEDKRKTTGEENGKFQSWRVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKVFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFI 180          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: DNM1L_BOVIN (Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.171e-29
Identity = 80/196 (40.82%), Postives = 105/196 (53.57%), Query Frame = 2
Query:  227 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL-HKLEEGSR-------------------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYI 736
            ME LI ++NK+Q     +G    A  +      LP I             LES+VG+D LPRG+GIVTRRPL+LQL H   E  R                         E+ +FLH   K +TDF  +R+EI++ET+R +G  K +S  PIHL I+SPNVVNLTL+DLPG+TKV V  QP  I   I  ++  +I
Sbjct:    1 MEALIPVINKLQDVFNTVG----ADII-----QLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGIVTRRPLILQLVHVAPEDKRKTTGEENDPATWKNSRHLSKGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKIFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFI 187          
BLAST of CK932713 vs. ExPASy Swiss-Prot
Match: DNM1L_RAT (Dynamin-1-like protein OS=Rattus norvegicus GN=Dnm1l PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.609e-29
Identity = 78/196 (39.80%), Postives = 105/196 (53.57%), Query Frame = 2
Query:  227 MENLISLVNKIQRACTALGDHGEASALPTLWDSLPAIAXXXXXXXXXXXXLESIVGKDFLPRGSGIVTRRPLVLQL-HKLEEGSR-------------------------EYAEFLHIPRKRFTDFAAVRKEIQDETDRETGRTKQISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVQDIENMVRSYI 736
            ME LI ++NK+Q     +G    A  +      LP I             LES+VG+D LPRG+G+VTRRPL+LQL H   E  R                         E+ +FLH   K +TDF  +R+EI++ET+R +G  K +S  PIHL ++SPNVVNLTL+DLPG+TKV V  QP  I   I  ++  +I
Sbjct:    1 MEALIPVINKLQDVFNTVG----ADII-----QLPQIVVVGTQSSGKSSVLESLVGRDLLPRGTGVVTRRPLILQLVHVSPEDKRKTTGEENDPATWKNSRHLSKGVEAEEWGKFLHTKNKLYTDFDEIRQEIENETERISGNNKGVSPEPIHLKVFSPNVVNLTLVDLPGMTKVPVGDQPKDIELQIRELILRFI 187          
The following BLAST results are available for this feature:
BLAST of CK932713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
DYNA_DICDI2.878e-3649.72Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1... [more]
VPS1_SCHPO8.665e-3345.21Vacuolar protein sorting-associated protein 1 OS=S... [more]
VPS1_YEAST1.132e-3241.04Vacuolar protein sorting-associated protein 1 OS=S... [more]
DNM1L_DANRE7.335e-3243.96Dynamin-1-like protein OS=Danio rerio GN=dnm1l PE=... [more]
DNM1L_HUMAN2.134e-3143.72Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE... [more]
DNM1_YEAST4.755e-3139.71Dynamin-related protein DNM1 OS=Saccharomyces cere... [more]
DRP3A_ARATH4.025e-3040.53Dynamin-related protein 3A OS=Arabidopsis thaliana... [more]
DNM1L_MOUSE4.025e-3041.27Dynamin-1-like protein OS=Mus musculus GN=Dnm1l PE... [more]
DNM1L_BOVIN1.171e-2940.82Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2... [more]
DNM1L_RAT2.609e-2939.80Dynamin-1-like protein OS=Rattus norvegicus GN=Dnm... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_E03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932713 ID=CK932713; Name=CK932713; organism=Citrus sinensis; type=EST; length=743bp
GGGGTCAACAGCCTCCCCACTTTCTTTTAAATTTCAAACTCTCTCTCTCT
CTCTCTCTCTCTCTCGTTTGTCCTACCGGCGAAGCAAAAACTAATCACAC
AGATCTCCTCTGAACGTCGCCGTTTCCAGCATCAGTTGTCAGATCCAGCT
GATCTGAATCTGACAGCTGAGATCATCTACGTTGCCGCCGCCGTCTCCCG
AGATATCTACTTAGCTGCGAGAGAAAATGGAGAACTTGATTTCTTTGGTT
AACAAAATACAAAGAGCTTGTACGGCTCTTGGCGACCACGGTGAAGCCAG
CGCATTGCCTACTCTTTGGGACTCTCTTCCTGCTATCGCCGTCGTCGGTG
GCCAGAGTTCTGGAAAGTCATCAGTGTTGGAGAGTATTGTTGGCAAGGAC
TTTTTACCGCGTGGATCTGGTATCGTTACACGGCGTCCTCTGGTGTTGCA
GCTTCATAAACTCGAAGAAGGCAGCAGAGAATATGCAGAGTTTCTTCACA
TTCCAAGGAAAAGATTTACCGATTTTGCTGCTGTGAGGAAAGAGATTCAA
GATGAGACTGATAGAGAGACTGGTCGTACCAAACAAATCTCGAGTGTACC
AATTCATCTCAGCATATATTCCCCTAATGTTGTCAACTTAACGCTGATTG
ATCTTCCTGGGCTCACAAAAGTAGCAGTTGAGGGTCAACCAGACAGTATT
GTGCAAGATATTGAGAATATGGTTCGCTCCTACATTGAGAAGC
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